BLASTX nr result

ID: Bupleurum21_contig00017020 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017020
         (1438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284113.1| PREDICTED: transcription factor bHLH63-like ...   382   e-103
ref|XP_002512912.1| conserved hypothetical protein [Ricinus comm...   332   1e-88
ref|XP_004173629.1| PREDICTED: transcription factor bHLH63-like ...   318   2e-84
ref|XP_004148552.1| PREDICTED: transcription factor bHLH63-like ...   318   2e-84
ref|XP_002313791.1| predicted protein [Populus trichocarpa] gi|2...   317   4e-84

>ref|XP_002284113.1| PREDICTED: transcription factor bHLH63-like [Vitis vinifera]
          Length = 456

 Score =  382 bits (980), Expect = e-103
 Identities = 218/387 (56%), Positives = 257/387 (66%), Gaps = 30/387 (7%)
 Frame = -2

Query: 1071 ALPEMLHCMNTAGNVS-SGTDLSVFERQRARMKWXXXXXXXXXXXQ--SFFNGNEMSMYS 901
            A PEMLHC++T+GNV+ +GTD++VFERQR RMKW           Q  S+F GNE SM+S
Sbjct: 5    ASPEMLHCLSTSGNVAGNGTDMTVFERQRVRMKWQQEQFQQQQQQQQQSYFGGNEFSMFS 64

Query: 900  TPAT--QAAQLQSLISNDT-GFGSFVNCAVKPDPGLDIGWPDYGKFG--------GDSDF 754
                  QA Q   LI+ D+ G G  +  AVK DPGL+  WP++GK           ++ F
Sbjct: 65   MGGQVGQAQQFHGLINGDSAGVGDLLGRAVKADPGLENVWPEFGKLTMPGTGFNVENAGF 124

Query: 753  LSYGYGNVNVNELNYAISRTXXXXXXXXXXXXXXXADVTNGKESVLPEKMKSTVGRESFK 574
             S G  N +  E+N+  SRT                     +ESVLPEK+ S VGRESFK
Sbjct: 125  ESAGILNCSGFEMNHTTSRTSSCPLAAAEAKV---------RESVLPEKIASAVGRESFK 175

Query: 573  KRKADKALGQKVIEEESIREKKNKGIVDEGESKITTEQNN----------------NCNN 442
            KRKADK    KV+ EE  ++K+ KG  ++GESKIT   NN                N NN
Sbjct: 176  KRKADKVQSPKVVAEEETKDKRIKGCAEDGESKITEANNNKNSTTTTTTTATTTTTNNNN 235

Query: 441  RETSNDTSKENSKISEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPG 262
            RETS DTSK    +SEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPG
Sbjct: 236  RETSADTSK----VSEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPG 291

Query: 261  CNKITGKAGMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIDSLFTKEMFPACTSNFS 82
            CNKITGKAGMLDEIINYVQSLQRQVEFLSMKLA VNPRLDFNID+   KE+FPAC +NF 
Sbjct: 292  CNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDNFLAKEVFPACAANFP 351

Query: 81   TIGLTSEMAGPAYLQFNTLQQAVTSGL 1
            TIG++SEM  P+YL ++ +QQ  T G+
Sbjct: 352  TIGMSSEMTNPSYLHYDPIQQVATCGV 378


>ref|XP_002512912.1| conserved hypothetical protein [Ricinus communis]
            gi|223547923|gb|EEF49415.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 444

 Score =  332 bits (851), Expect = 1e-88
 Identities = 194/363 (53%), Positives = 228/363 (62%), Gaps = 13/363 (3%)
 Frame = -2

Query: 1068 LPEMLHCMNTAGNVSSGTDLSVFERQRARMKWXXXXXXXXXXXQSFFNGNEMSMYSTPAT 889
            LPEMLHC          TDL+V ERQRAR+KW               +    + +    +
Sbjct: 6    LPEMLHC----------TDLTVLERQRARLKWQQEQQHLQLEQHQHQHHQGENYFLGDLS 55

Query: 888  QAAQLQSLISNDTGF----GSFVNCAVKPDPGLDIGWPDYGKFGGDSDFLSYGYGNVNVN 721
               QLQ       GF    G  V  +VKPDPG    + D G +   S     GYG     
Sbjct: 56   GVFQLQQQQQQQQGFQGDLGEVVIRSVKPDPG----FLDNGCWSNTSSTDLVGYGPCGFG 111

Query: 720  ELNYAISRTXXXXXXXXXXXXXXXADVTNGKESVLPEKMKSTVGRESFKKRKADKALGQK 541
             +N+AISRT                 +  G+ESV+ EK+   VG ES KKRK DK     
Sbjct: 112  NMNFAISRTSSCPPTVADAGPV----LVKGRESVVSEKLTCGVGSESTKKRKVDKVQNNT 167

Query: 540  --VIEEESIREKKNKGIVDEGESKITTEQNNNC-------NNRETSNDTSKENSKISEVQ 388
              V E+++ R+K+ K   +EGESK+ TE+NNN        +N+E S +TSK+NSK++EVQ
Sbjct: 168  KVVAEDDNCRDKRIKVCAEEGESKMITEKNNNNKSSSSKNSNKENSAETSKDNSKVTEVQ 227

Query: 387  KPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYV 208
            KPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYV
Sbjct: 228  KPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYV 287

Query: 207  QSLQRQVEFLSMKLATVNPRLDFNIDSLFTKEMFPACTSNFSTIGLTSEMAGPAYLQFNT 28
            QSLQRQVEFLSMKLA VNPRLDFNID+L  KE FP C +NF  IGL+S+M  PAYLQFN 
Sbjct: 288  QSLQRQVEFLSMKLAAVNPRLDFNIDNLIAKETFPPCPTNFPAIGLSSDMTNPAYLQFNP 347

Query: 27   LQQ 19
            +QQ
Sbjct: 348  VQQ 350


>ref|XP_004173629.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
          Length = 456

 Score =  318 bits (815), Expect = 2e-84
 Identities = 209/392 (53%), Positives = 234/392 (59%), Gaps = 37/392 (9%)
 Frame = -2

Query: 1071 ALPEMLHCMNTAGNVSSGTDLSVFERQRARMKWXXXXXXXXXXXQSFFN-----GNEMSM 907
            ALPEMLHC+N+ GN S    LSV ERQRAR+KW           QS F+     G     
Sbjct: 5    ALPEMLHCLNSTGNCSD--TLSVLERQRARLKWQQDMLFQQPLNQSCFSRADYGGGFPPP 62

Query: 906  YSTPATQAAQLQSLISNDTGFGS------FVNCAVKPDPGLDIGWPDYGKFGGDSDFLSY 745
             S PA         +S   G G        V  AVKPDPGL+ GW + GKF  D   L  
Sbjct: 63   VSVPADHLTGFPGYMSGGGGVGGGLSHVEMVMGAVKPDPGLEDGWSEMGKF--DPSLLL- 119

Query: 744  GYGNVNVNELNYAISRTXXXXXXXXXXXXXXXADVTNGKESVLPEKMKSTVGRESFKKRK 565
               N    ELN ++SRT                         + EKM S  GRESFKKRK
Sbjct: 120  ---NPTACELNSSLSRTSSCLPVVAP---------------TVAEKMGSMAGRESFKKRK 161

Query: 564  ADKALG----------QKVIEEESIREKKNKGIV--DEGESKITTEQN---NNC------ 448
            A+KA            +  +EE+     K K I    EGE   TT+QN   NN       
Sbjct: 162  AEKAHNTTTTANTNNNKVTVEEDENNNSKEKRIKTSSEGELSKTTDQNGTKNNSTITTTT 221

Query: 447  -NNRETSNDTSKENSKISEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDL 271
             NNRETS DTSKENSK SEVQKPDYIHVRARRGQATDSHSLAER RREKISERMKYLQDL
Sbjct: 222  NNNRETSADTSKENSKASEVQKPDYIHVRARRGQATDSHSLAERARREKISERMKYLQDL 281

Query: 270  VPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIDSLFTKEMF-PACT 94
            VPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLA VNPRLDFN+D LF KE+F P+CT
Sbjct: 282  VPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDDLFNKEVFPPSCT 341

Query: 93   -SNFSTI-GLTSEMAGP-AYLQFNTLQQAVTS 7
             +NF ++ G++SEM  P +YLQFN   Q + S
Sbjct: 342  AANFPSVGGMSSEMTDPSSYLQFNPNNQQMDS 373


>ref|XP_004148552.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
          Length = 523

 Score =  318 bits (815), Expect = 2e-84
 Identities = 209/392 (53%), Positives = 234/392 (59%), Gaps = 37/392 (9%)
 Frame = -2

Query: 1071 ALPEMLHCMNTAGNVSSGTDLSVFERQRARMKWXXXXXXXXXXXQSFFN-----GNEMSM 907
            ALPEMLHC+N+ GN S    LSV ERQRAR+KW           QS F+     G     
Sbjct: 5    ALPEMLHCLNSTGNCSD--TLSVLERQRARLKWQQDMLFQQPLNQSCFSRADYGGGFPPP 62

Query: 906  YSTPATQAAQLQSLISNDTGFGS------FVNCAVKPDPGLDIGWPDYGKFGGDSDFLSY 745
             S PA         +S   G G        V  AVKPDPGL+ GW + GKF  D   L  
Sbjct: 63   VSVPADHLTGFPGYMSGGGGVGGGLSHVEMVMGAVKPDPGLEDGWSEMGKF--DPSLLL- 119

Query: 744  GYGNVNVNELNYAISRTXXXXXXXXXXXXXXXADVTNGKESVLPEKMKSTVGRESFKKRK 565
               N    ELN ++SRT                         + EKM S  GRESFKKRK
Sbjct: 120  ---NPTACELNSSLSRTSSCLPVVAP---------------TVAEKMGSMAGRESFKKRK 161

Query: 564  ADKALG----------QKVIEEESIREKKNKGIV--DEGESKITTEQN---NNC------ 448
            A+KA            +  +EE+     K K I    EGE   TT+QN   NN       
Sbjct: 162  AEKAHNTTTTANTNNNKVTVEEDENNNSKEKRIKTSSEGELSKTTDQNGTKNNSTITTTT 221

Query: 447  -NNRETSNDTSKENSKISEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDL 271
             NNRETS DTSKENSK SEVQKPDYIHVRARRGQATDSHSLAER RREKISERMKYLQDL
Sbjct: 222  NNNRETSADTSKENSKASEVQKPDYIHVRARRGQATDSHSLAERARREKISERMKYLQDL 281

Query: 270  VPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIDSLFTKEMF-PACT 94
            VPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLA VNPRLDFN+D LF KE+F P+CT
Sbjct: 282  VPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDDLFNKEVFPPSCT 341

Query: 93   -SNFSTI-GLTSEMAGP-AYLQFNTLQQAVTS 7
             +NF ++ G++SEM  P +YLQFN   Q + S
Sbjct: 342  AANFPSVGGMSSEMTDPSSYLQFNPNNQQMDS 373


>ref|XP_002313791.1| predicted protein [Populus trichocarpa] gi|222850199|gb|EEE87746.1|
            predicted protein [Populus trichocarpa]
          Length = 439

 Score =  317 bits (813), Expect = 4e-84
 Identities = 198/367 (53%), Positives = 228/367 (62%), Gaps = 16/367 (4%)
 Frame = -2

Query: 1059 MLHCMNTAGNVSSGTDLSVFERQRARMKWXXXXXXXXXXXQSFFNGNEMSMYSTPATQAA 880
            MLHC          TD++V ERQRA +KW                  E+S Y T  T   
Sbjct: 15   MLHC----------TDITVLERQRACIKWQQEQQQQQQVQ---LQQQEIS-YFTELTGVF 60

Query: 879  QLQSLISNDTGFGSFVNCAVKPDPGL-DIGWPDYGKFGGDSDFLSYG--YGNVNVNELNY 709
            Q      ++ G    V  +VKPDPGL D GW +    G     L  G  Y N +  ELNY
Sbjct: 61   QQAGF--HEGGLSEVVTRSVKPDPGLVDNGWNNDHVVG-----LGVGPLYDNGSGFELNY 113

Query: 708  -AISRTXXXXXXXXXXXXXXXADVTNGKESVLPEKMKSTVGRESFKKRKAD-KALGQKVI 535
             AISR                     G ESV+ +K+ S VGRES KKRK D K    KV 
Sbjct: 114  GAISRISSCPPAAVAAVAAA---TVKGSESVVSDKISSGVGRESSKKRKVDNKQNNSKVD 170

Query: 534  EEESIREKKNKGIVDEGESKITTEQNN-----------NCNNRETSNDTSKENSKISEVQ 388
             EE  R+K+ KG  +EGESKIT + NN           N +N+E+S   SK+NSK++EVQ
Sbjct: 171  AEEDTRDKRIKGCAEEGESKITEKNNNKNSRNNNTNKNNNSNKESSAGNSKDNSKVTEVQ 230

Query: 387  KPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYV 208
            KPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYV
Sbjct: 231  KPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYV 290

Query: 207  QSLQRQVEFLSMKLATVNPRLDFNIDSLFTKEMFPACTSNFSTIGLTSEMAGPAYLQFNT 28
            QSLQRQVEFLSMKLA VNPRLDFN D+LF +E FPAC+ NF TIG++S+M  PAYLQFN 
Sbjct: 291  QSLQRQVEFLSMKLAAVNPRLDFNFDNLFAREAFPACSVNFPTIGMSSDMTNPAYLQFNP 350

Query: 27   LQQAVTS 7
             QQ + +
Sbjct: 351  AQQQLVT 357


Top