BLASTX nr result

ID: Bupleurum21_contig00017015 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017015
         (974 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263097.1| PREDICTED: transmembrane protein 56-like [Vi...   338   2e-90
emb|CBI15782.3| unnamed protein product [Vitis vinifera]              338   2e-90
ref|XP_002325620.1| predicted protein [Populus trichocarpa] gi|2...   317   3e-84
ref|XP_003553160.1| PREDICTED: LOW QUALITY PROTEIN: transmembran...   316   5e-84
ref|XP_002526388.1| conserved hypothetical protein [Ricinus comm...   316   5e-84

>ref|XP_002263097.1| PREDICTED: transmembrane protein 56-like [Vitis vinifera]
          Length = 267

 Score =  338 bits (866), Expect = 2e-90
 Identities = 162/238 (68%), Positives = 190/238 (79%)
 Frame = +3

Query: 6   GIVVCKIVYEVTGVVSLSLFKGYAKLDSAQKLEWNNRGFSTFHAFFVAVASVYILLVSDI 185
           G++ CKIVYE+TG++S   FKGY KL + +K+EWNNRGFSTFHA  VAVAS+Y+LLVSD+
Sbjct: 29  GMIFCKIVYELTGLLSNLCFKGYTKLSNTEKVEWNNRGFSTFHAIIVAVASLYLLLVSDL 88

Query: 186 FKEGPEDGPIIFRTSTLSETALGISLGYFVSDLAMILWTYPALGGMEYVLHHGLSMFSII 365
           F E   D  II R STLS+T LGIS+GYF+SDLAMILW +PALGG+EYVLHHGLSMFSI 
Sbjct: 89  FDEDSRDESIINRASTLSDTILGISIGYFLSDLAMILWNFPALGGLEYVLHHGLSMFSIF 148

Query: 366 QSLVSGQAQFYILMVLFTETTTPSVNLRWYLDVAGQKKSKFYTCNGIALFLGWLGARILW 545
            SL+SGQ Q YILMVLF+E+TTP VNLRW+LDVAG K S  Y CNGIALF GWL ARIL 
Sbjct: 149 LSLISGQGQVYILMVLFSESTTPFVNLRWHLDVAGLKSSNLYICNGIALFFGWLVARILL 208

Query: 546 XXXXXXXXXXXXDQVQKMYPLGFYSMLTIPPVLTMMNVFWFWKITKGMIKTLTKARHS 719
                       D+V+K++PLGFYS+L +PPVL MMN FWFWKI KG+IKTL+KARHS
Sbjct: 209 FIFFFYHMIIHFDEVKKIFPLGFYSLLMVPPVLAMMNAFWFWKIAKGLIKTLSKARHS 266


>emb|CBI15782.3| unnamed protein product [Vitis vinifera]
          Length = 257

 Score =  338 bits (866), Expect = 2e-90
 Identities = 162/238 (68%), Positives = 190/238 (79%)
 Frame = +3

Query: 6   GIVVCKIVYEVTGVVSLSLFKGYAKLDSAQKLEWNNRGFSTFHAFFVAVASVYILLVSDI 185
           G++ CKIVYE+TG++S   FKGY KL + +K+EWNNRGFSTFHA  VAVAS+Y+LLVSD+
Sbjct: 19  GMIFCKIVYELTGLLSNLCFKGYTKLSNTEKVEWNNRGFSTFHAIIVAVASLYLLLVSDL 78

Query: 186 FKEGPEDGPIIFRTSTLSETALGISLGYFVSDLAMILWTYPALGGMEYVLHHGLSMFSII 365
           F E   D  II R STLS+T LGIS+GYF+SDLAMILW +PALGG+EYVLHHGLSMFSI 
Sbjct: 79  FDEDSRDESIINRASTLSDTILGISIGYFLSDLAMILWNFPALGGLEYVLHHGLSMFSIF 138

Query: 366 QSLVSGQAQFYILMVLFTETTTPSVNLRWYLDVAGQKKSKFYTCNGIALFLGWLGARILW 545
            SL+SGQ Q YILMVLF+E+TTP VNLRW+LDVAG K S  Y CNGIALF GWL ARIL 
Sbjct: 139 LSLISGQGQVYILMVLFSESTTPFVNLRWHLDVAGLKSSNLYICNGIALFFGWLVARILL 198

Query: 546 XXXXXXXXXXXXDQVQKMYPLGFYSMLTIPPVLTMMNVFWFWKITKGMIKTLTKARHS 719
                       D+V+K++PLGFYS+L +PPVL MMN FWFWKI KG+IKTL+KARHS
Sbjct: 199 FIFFFYHMIIHFDEVKKIFPLGFYSLLMVPPVLAMMNAFWFWKIAKGLIKTLSKARHS 256


>ref|XP_002325620.1| predicted protein [Populus trichocarpa] gi|222862495|gb|EEF00002.1|
           predicted protein [Populus trichocarpa]
          Length = 265

 Score =  317 bits (812), Expect = 3e-84
 Identities = 155/238 (65%), Positives = 186/238 (78%)
 Frame = +3

Query: 3   AGIVVCKIVYEVTGVVSLSLFKGYAKLDSAQKLEWNNRGFSTFHAFFVAVASVYILLVSD 182
           +GI+ C IVY++T  VS   FKGY KL  AQK+EWNNRGFSTFHA FVA AS+Y+LL+S 
Sbjct: 26  SGIIACGIVYKLTAFVSRLYFKGYGKLTDAQKVEWNNRGFSTFHALFVASASLYLLLLSG 85

Query: 183 IFKEGPEDGPIIFRTSTLSETALGISLGYFVSDLAMILWTYPALGGMEYVLHHGLSMFSI 362
           +F E   D  ++ RTSTLS + LGIS+GYF+SDLAMIL+ +PALGGMEY+LHHGLSMFSI
Sbjct: 86  LFYEDSRDELVVNRTSTLSNSTLGISIGYFLSDLAMILFHFPALGGMEYLLHHGLSMFSI 145

Query: 363 IQSLVSGQAQFYILMVLFTETTTPSVNLRWYLDVAGQKKSKFYTCNGIALFLGWLGARIL 542
           I +L+SGQAQ YILMVLF+E TTP VNLRWYLDVAGQK SK Y  NG+ LF+GWL ARIL
Sbjct: 146 ILALLSGQAQIYILMVLFSEITTPFVNLRWYLDVAGQKSSKLYIWNGVLLFMGWLVARIL 205

Query: 543 WXXXXXXXXXXXXDQVQKMYPLGFYSMLTIPPVLTMMNVFWFWKITKGMIKTLTKARH 716
                        DQV++++PLGFYS+L IP  L +MNV WFWKI KG++KTL+KARH
Sbjct: 206 LFIFFFSHMFIHFDQVKQIFPLGFYSILVIPGTLAVMNVLWFWKIVKGLMKTLSKARH 263


>ref|XP_003553160.1| PREDICTED: LOW QUALITY PROTEIN: transmembrane protein 56-B-like
           [Glycine max]
          Length = 280

 Score =  316 bits (810), Expect = 5e-84
 Identities = 147/238 (61%), Positives = 185/238 (77%)
 Frame = +3

Query: 6   GIVVCKIVYEVTGVVSLSLFKGYAKLDSAQKLEWNNRGFSTFHAFFVAVASVYILLVSDI 185
           GI+ C +VY +T ++S  LFKGY KL SA+K+EWNNRGFSTFHA F +  S Y+L++SDI
Sbjct: 35  GIIFCVVVYRLTAILSSLLFKGYGKLSSAEKIEWNNRGFSTFHALFASFTSFYLLVLSDI 94

Query: 186 FKEGPEDGPIIFRTSTLSETALGISLGYFVSDLAMILWTYPALGGMEYVLHHGLSMFSII 365
           F +   +  +I R+ST S + LGIS+GYF++DLAMILW +PALGG+EYVLHHGLSMFSII
Sbjct: 95  FNKDSHEELVINRSSTFSNSVLGISIGYFLADLAMILWHFPALGGLEYVLHHGLSMFSII 154

Query: 366 QSLVSGQAQFYILMVLFTETTTPSVNLRWYLDVAGQKKSKFYTCNGIALFLGWLGARILW 545
           QSL+ GQ Q YILMVLF+E+TTP VNLRW+LD+A  K SK Y  NGIALF GWL ARI  
Sbjct: 155 QSLLCGQGQIYILMVLFSESTTPFVNLRWHLDIADLKSSKLYVWNGIALFFGWLIARIFL 214

Query: 546 XXXXXXXXXXXXDQVQKMYPLGFYSMLTIPPVLTMMNVFWFWKITKGMIKTLTKARHS 719
                       D+V+++YPLGFYS+L +PPVL MMN+FWFWKI KG++KT++KA+HS
Sbjct: 215 FMFFFIHMWTHFDEVKEIYPLGFYSLLVVPPVLAMMNLFWFWKIAKGLVKTISKAKHS 272


>ref|XP_002526388.1| conserved hypothetical protein [Ricinus communis]
           gi|223534250|gb|EEF35964.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 267

 Score =  316 bits (810), Expect = 5e-84
 Identities = 149/238 (62%), Positives = 190/238 (79%)
 Frame = +3

Query: 3   AGIVVCKIVYEVTGVVSLSLFKGYAKLDSAQKLEWNNRGFSTFHAFFVAVASVYILLVSD 182
           +GI++C IVY++TGV+SL  F GY KL  AQK+EWNNRGFSTFHA  VA AS Y+L++S 
Sbjct: 27  SGIIMCIIVYKLTGVLSLLCFNGYGKLTKAQKIEWNNRGFSTFHAIVVASASFYLLMLSG 86

Query: 183 IFKEGPEDGPIIFRTSTLSETALGISLGYFVSDLAMILWTYPALGGMEYVLHHGLSMFSI 362
           +F E   D  II R+S +S + LG+S+GYF++DLAMILW +PALGG+EYVLHHGLSM+SI
Sbjct: 87  LFDEDSHDELIINRSSDISNSVLGVSIGYFLADLAMILWYFPALGGLEYVLHHGLSMYSI 146

Query: 363 IQSLVSGQAQFYILMVLFTETTTPSVNLRWYLDVAGQKKSKFYTCNGIALFLGWLGARIL 542
           I +L+SGQAQ YILM+LF+E+TTP VNLRWYLDVAGQK SK Y  NG+ LFLGWL ARI+
Sbjct: 147 ILALLSGQAQIYILMILFSESTTPFVNLRWYLDVAGQKSSKLYVSNGVLLFLGWLVARII 206

Query: 543 WXXXXXXXXXXXXDQVQKMYPLGFYSMLTIPPVLTMMNVFWFWKITKGMIKTLTKARH 716
                        DQV+K++PLGFYS+L++PPVL +MNV WFWKI +G+IKTL++A++
Sbjct: 207 LFICFFTHMFIHFDQVKKVFPLGFYSLLSVPPVLGVMNVVWFWKIARGLIKTLSRAKN 264


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