BLASTX nr result
ID: Bupleurum21_contig00017001
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00017001
(1517 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002511977.1| DNA mismatch repair protein MSH2, putative [... 775 0.0
emb|CBI15412.3| unnamed protein product [Vitis vinifera] 761 0.0
ref|XP_002317931.1| predicted protein [Populus trichocarpa] gi|2... 758 0.0
ref|NP_001234067.1| mismatch repair protein [Solanum lycopersicu... 754 0.0
ref|XP_003549805.1| PREDICTED: DNA mismatch repair protein Msh2-... 745 0.0
>ref|XP_002511977.1| DNA mismatch repair protein MSH2, putative [Ricinus communis]
gi|223549157|gb|EEF50646.1| DNA mismatch repair protein
MSH2, putative [Ricinus communis]
Length = 936
Score = 775 bits (2002), Expect = 0.0
Identities = 378/478 (79%), Positives = 430/478 (89%)
Frame = +1
Query: 31 DAKQAQGFLSFFKTLPNXXXXXXXXXXXXYYTSHGENATFIAKTYYRTTTALRQLGTGAD 210
DAKQAQGFLSFFKTLP+ YYTSHGENATFIAKTYY TTTALRQLG+G D
Sbjct: 13 DAKQAQGFLSFFKTLPHDPRAVRVFDRRDYYTSHGENATFIAKTYYHTTTALRQLGSGPD 72
Query: 211 SVSSISISKNMFEVIVRDLLLERTDHSLELYEGSGSSWRLVKSGTPGNLGSFEDILFANN 390
+SS+SISKNMFE I RDLLLERTDH+LELYEGSGS+WRLVKSGTPGNLGSFED+LFANN
Sbjct: 73 GLSSVSISKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNLGSFEDVLFANN 132
Query: 391 DMQDSPVIVALVPSFKDNGCTVGLSYIDLTKRVLGVTEFLDDSHFTNLESALVALGCKEC 570
+MQDSP + A++P+F++NGC++GL Y+DLTKR+LG+ EFLDDSHFTNLESALVALGCKEC
Sbjct: 133 EMQDSPAVAAVIPNFRENGCSIGLGYVDLTKRILGLAEFLDDSHFTNLESALVALGCKEC 192
Query: 571 ILPMDSAKSSESKSLHDTMSRCGVMVTERKKPEFKGRDVMQDLGRLVKGSKEPVRDLISG 750
+LP++S KS E ++LHD ++RCGVM+TERKK EFK RD+++DLGRLVKGS EPVRDL+SG
Sbjct: 193 LLPIESGKSIECRTLHDALTRCGVMLTERKKNEFKTRDLVEDLGRLVKGSIEPVRDLVSG 252
Query: 751 FEFAPGALGALLSYTELLADENNYGSYILRQYNLDSYMRLDSAAMRALNVMESKTDANKT 930
FEFAPGALGALLSY ELLADE+NYG+Y +R+YNLDSYMRLDSAAMRALNV+ESKTDANK
Sbjct: 253 FEFAPGALGALLSYAELLADESNYGNYTIRKYNLDSYMRLDSAAMRALNVLESKTDANKN 312
Query: 931 FSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNHINCRLDLVQAFVDDTELRQNLRQHLKR 1110
FSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVN IN RLDLVQAFV+DT LRQ+LRQHLKR
Sbjct: 313 FSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINSRLDLVQAFVEDTALRQDLRQHLKR 372
Query: 1111 ISDMERLMRNVEKKRANLVHIVKLYQTSIRLPYIKSALERYDGQFASLIKERYLDSLDLW 1290
ISD+ERL+ N+EK+RA L HIVKLYQ+SIRLPYI+ AL++YDGQF+SLIKERYLD L+
Sbjct: 373 ISDIERLVHNLEKRRAGLQHIVKLYQSSIRLPYIRGALDKYDGQFSSLIKERYLDPLESL 432
Query: 1291 TDDKHLNKFLALVEVSVDLDQLANGEYMISPSYDVNLSSLKDEQESLEMQINELHKQT 1464
TDD HLNKF+ALVE SVDLDQL NGEY+ISPSYD LS+LKDEQESLE QI+ LHKQT
Sbjct: 433 TDDDHLNKFIALVETSVDLDQLDNGEYLISPSYDPALSALKDEQESLECQIHNLHKQT 490
>emb|CBI15412.3| unnamed protein product [Vitis vinifera]
Length = 945
Score = 761 bits (1965), Expect = 0.0
Identities = 366/478 (76%), Positives = 430/478 (89%)
Frame = +1
Query: 31 DAKQAQGFLSFFKTLPNXXXXXXXXXXXXYYTSHGENATFIAKTYYRTTTALRQLGTGAD 210
DAKQAQGFLSFFKTLP YYT+HGENATFIAKTYY TTTALRQLG+G+D
Sbjct: 17 DAKQAQGFLSFFKTLPRDPRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGSGSD 76
Query: 211 SVSSISISKNMFEVIVRDLLLERTDHSLELYEGSGSSWRLVKSGTPGNLGSFEDILFANN 390
+SS+S+SKNMFE I R+LLLERTDH+LELYEGSGS+WRLVKSGTPGNLGSFED+LFANN
Sbjct: 77 GISSVSVSKNMFETIARNLLLERTDHTLELYEGSGSNWRLVKSGTPGNLGSFEDVLFANN 136
Query: 391 DMQDSPVIVALVPSFKDNGCTVGLSYIDLTKRVLGVTEFLDDSHFTNLESALVALGCKEC 570
+MQDSPVIVAL P+F++NGCTVGL ++DLT+RVLG+ EFLDDS FTN+ESALVALGC+EC
Sbjct: 137 EMQDSPVIVALFPNFRENGCTVGLGFVDLTRRVLGLAEFLDDSQFTNVESALVALGCREC 196
Query: 571 ILPMDSAKSSESKSLHDTMSRCGVMVTERKKPEFKGRDVMQDLGRLVKGSKEPVRDLISG 750
+LP +SAKSSE+++LHD +SRCGVM+TERK+ EFK RD++QDLGRLVKGS EPVRDL+SG
Sbjct: 197 LLPSESAKSSETRTLHDALSRCGVMLTERKRTEFKARDLVQDLGRLVKGSIEPVRDLVSG 256
Query: 751 FEFAPGALGALLSYTELLADENNYGSYILRQYNLDSYMRLDSAAMRALNVMESKTDANKT 930
FE APGALG LLSY ELLADE+NYG++ +++YNLDSYMRLDSAA+RALNV+ESKTDANK
Sbjct: 257 FELAPGALGLLLSYAELLADESNYGNFTIQRYNLDSYMRLDSAAVRALNVLESKTDANKN 316
Query: 931 FSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNHINCRLDLVQAFVDDTELRQNLRQHLKR 1110
FSLFGLMNRTCTAGMGKRLLHMWLKQPL+DVN INCR DLVQAFV+DT LRQ+LRQHLKR
Sbjct: 317 FSLFGLMNRTCTAGMGKRLLHMWLKQPLVDVNEINCRQDLVQAFVEDTALRQDLRQHLKR 376
Query: 1111 ISDMERLMRNVEKKRANLVHIVKLYQTSIRLPYIKSALERYDGQFASLIKERYLDSLDLW 1290
ISD+ERL+R +EK+RA+L H+VKLYQ+SIRLPYIKSAL +YDGQF+SLIKE+YLD L+ W
Sbjct: 377 ISDIERLLRTLEKRRASLQHVVKLYQSSIRLPYIKSALGQYDGQFSSLIKEKYLDPLESW 436
Query: 1291 TDDKHLNKFLALVEVSVDLDQLANGEYMISPSYDVNLSSLKDEQESLEMQINELHKQT 1464
TDD HLN+F+ LVE +VDL++L NGEYMIS YD L+SLK++QE+LE+QI+ LHKQT
Sbjct: 437 TDDDHLNRFIGLVEAAVDLNELENGEYMISSGYDAKLASLKNDQETLELQIHNLHKQT 494
>ref|XP_002317931.1| predicted protein [Populus trichocarpa] gi|222858604|gb|EEE96151.1|
predicted protein [Populus trichocarpa]
Length = 944
Score = 758 bits (1958), Expect = 0.0
Identities = 374/478 (78%), Positives = 425/478 (88%)
Frame = +1
Query: 31 DAKQAQGFLSFFKTLPNXXXXXXXXXXXXYYTSHGENATFIAKTYYRTTTALRQLGTGAD 210
DAKQAQGFLSFFKTLP+ YYT H ENATFIAKTYY TTTALRQLG+G++
Sbjct: 19 DAKQAQGFLSFFKTLPHDPRAVRVFDRRDYYTVHAENATFIAKTYYHTTTALRQLGSGSN 78
Query: 211 SVSSISISKNMFEVIVRDLLLERTDHSLELYEGSGSSWRLVKSGTPGNLGSFEDILFANN 390
+SS+SISKNMFE I RDLLLERTDH+LELYEGSGS+W+LVKSGTPGNLGSFED+LFANN
Sbjct: 79 GLSSVSISKNMFETIARDLLLERTDHTLELYEGSGSNWKLVKSGTPGNLGSFEDVLFANN 138
Query: 391 DMQDSPVIVALVPSFKDNGCTVGLSYIDLTKRVLGVTEFLDDSHFTNLESALVALGCKEC 570
DMQDSPV+VAL+ +F++ GCTVGLSY+DLTKRVLG+ EFLDDSHFTN+ESALVAL CKEC
Sbjct: 139 DMQDSPVVVALLLNFREKGCTVGLSYVDLTKRVLGLAEFLDDSHFTNVESALVALSCKEC 198
Query: 571 ILPMDSAKSSESKSLHDTMSRCGVMVTERKKPEFKGRDVMQDLGRLVKGSKEPVRDLISG 750
+LPM+S KS++ ++LHD +++CGVM+TERKK EFK RD++QDLGRLVKG EPVRDL+SG
Sbjct: 199 LLPMESGKSNDCRTLHDVLTKCGVMLTERKKNEFKTRDLVQDLGRLVKGPLEPVRDLVSG 258
Query: 751 FEFAPGALGALLSYTELLADENNYGSYILRQYNLDSYMRLDSAAMRALNVMESKTDANKT 930
FEFAPGALGALLSY ELLADE+NYG+Y +R+YNLDSYMRLDSAA RALNV+ESKTDANK
Sbjct: 259 FEFAPGALGALLSYAELLADESNYGNYRIRKYNLDSYMRLDSAATRALNVLESKTDANKN 318
Query: 931 FSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNHINCRLDLVQAFVDDTELRQNLRQHLKR 1110
FSLFGLMNRTCTAGMGKRLLHMWLKQPLL+V+ IN RLDLVQAFVDDT LRQ+LRQHLKR
Sbjct: 319 FSLFGLMNRTCTAGMGKRLLHMWLKQPLLEVDAINSRLDLVQAFVDDTGLRQDLRQHLKR 378
Query: 1111 ISDMERLMRNVEKKRANLVHIVKLYQTSIRLPYIKSALERYDGQFASLIKERYLDSLDLW 1290
ISD+ERLM VEK RA L HIVKLYQ+ IRLPYIK ALERYDGQF+SLIKE+YL+SL++W
Sbjct: 379 ISDIERLMHIVEKGRAGLHHIVKLYQSIIRLPYIKGALERYDGQFSSLIKEKYLESLEVW 438
Query: 1291 TDDKHLNKFLALVEVSVDLDQLANGEYMISPSYDVNLSSLKDEQESLEMQINELHKQT 1464
TDD HLNKF+ALVE +VDLDQL NGEYMISP Y+ L +LK EQESLE QI+ LHKQT
Sbjct: 439 TDDNHLNKFIALVETAVDLDQLDNGEYMISPGYEAALGALKAEQESLEHQIHNLHKQT 496
>ref|NP_001234067.1| mismatch repair protein [Solanum lycopersicum]
gi|296034481|gb|ADG85112.1| mismatch repair protein
[Solanum lycopersicum]
Length = 943
Score = 754 bits (1948), Expect = 0.0
Identities = 365/478 (76%), Positives = 421/478 (88%)
Frame = +1
Query: 31 DAKQAQGFLSFFKTLPNXXXXXXXXXXXXYYTSHGENATFIAKTYYRTTTALRQLGTGAD 210
DA+QAQGFLSFFKTLP YYT+HG++ATFIAKTYY TTTALRQLG G
Sbjct: 17 DARQAQGFLSFFKTLPKDVRAVRLFDRRDYYTAHGDDATFIAKTYYHTTTALRQLGNGVG 76
Query: 211 SVSSISISKNMFEVIVRDLLLERTDHSLELYEGSGSSWRLVKSGTPGNLGSFEDILFANN 390
++SS+S+S+NMFE I RD+LLER D +LELYEGSGS+W+LVKSGTPGN GSFEDILFANN
Sbjct: 77 ALSSVSVSRNMFETIARDILLERMDRTLELYEGSGSNWKLVKSGTPGNFGSFEDILFANN 136
Query: 391 DMQDSPVIVALVPSFKDNGCTVGLSYIDLTKRVLGVTEFLDDSHFTNLESALVALGCKEC 570
+MQDSPVIVAL P F NGCTVGL Y+D+TKRVLG+ EFLDDSHFTNLESALVALGC+EC
Sbjct: 137 EMQDSPVIVALAPKFDQNGCTVGLGYVDITKRVLGLAEFLDDSHFTNLESALVALGCREC 196
Query: 571 ILPMDSAKSSESKSLHDTMSRCGVMVTERKKPEFKGRDVMQDLGRLVKGSKEPVRDLISG 750
++P ++ KSSES+ L+D +SRCGVMVTERKK EFKGRD++QDLGRLVKGS EPVRDL+S
Sbjct: 197 LVPTETGKSSESRPLYDAISRCGVMVTERKKTEFKGRDLVQDLGRLVKGSVEPVRDLVSS 256
Query: 751 FEFAPGALGALLSYTELLADENNYGSYILRQYNLDSYMRLDSAAMRALNVMESKTDANKT 930
FE A GALG +LSY ELLAD++NYG+Y ++QYNLDSYMRLDSAAMRALNVMESK+DANK
Sbjct: 257 FECAAGALGCILSYAELLADDSNYGNYTVKQYNLDSYMRLDSAAMRALNVMESKSDANKN 316
Query: 931 FSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNHINCRLDLVQAFVDDTELRQNLRQHLKR 1110
FSLFGLMNRTCTAGMGKRLLHMWLKQPLLDV+ INCRLDLVQAFV+D LRQ+LRQHLKR
Sbjct: 317 FSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVDEINCRLDLVQAFVEDAALRQDLRQHLKR 376
Query: 1111 ISDMERLMRNVEKKRANLVHIVKLYQTSIRLPYIKSALERYDGQFASLIKERYLDSLDLW 1290
ISD+ERL N+E+KRA+L+H+VKLYQ+ IR+PYIKS LERYDGQFA LI+ERY+DSL+ W
Sbjct: 377 ISDIERLTHNLERKRASLLHVVKLYQSGIRIPYIKSVLERYDGQFAPLIRERYIDSLEKW 436
Query: 1291 TDDKHLNKFLALVEVSVDLDQLANGEYMISPSYDVNLSSLKDEQESLEMQINELHKQT 1464
+DD HLNKF+ALVE +VDLDQL NGEYMIS +YD NLS+LKDEQE+LE QI+ LHKQT
Sbjct: 437 SDDNHLNKFIALVETAVDLDQLENGEYMISSAYDPNLSALKDEQETLEQQIHNLHKQT 494
>ref|XP_003549805.1| PREDICTED: DNA mismatch repair protein Msh2-like [Glycine max]
Length = 942
Score = 745 bits (1923), Expect = 0.0
Identities = 358/478 (74%), Positives = 426/478 (89%)
Frame = +1
Query: 31 DAKQAQGFLSFFKTLPNXXXXXXXXXXXXYYTSHGENATFIAKTYYRTTTALRQLGTGAD 210
D+KQAQGFLSFFKTLP+ YYT+HGENATFIAKTYY TTTA+RQLG+G++
Sbjct: 18 DSKQAQGFLSFFKTLPDDPRAVRFFDRRDYYTAHGENATFIAKTYYHTTTAMRQLGSGSN 77
Query: 211 SVSSISISKNMFEVIVRDLLLERTDHSLELYEGSGSSWRLVKSGTPGNLGSFEDILFANN 390
++SS+S+S+NMFE I RDLLLERTDH+LELYEGSGS+WRLVKSGTPGN+GSFED+LFAN+
Sbjct: 78 ALSSVSVSRNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNIGSFEDVLFANS 137
Query: 391 DMQDSPVIVALVPSFKDNGCTVGLSYIDLTKRVLGVTEFLDDSHFTNLESALVALGCKEC 570
+MQDSPV+VAL ++++NGCT+GL ++DLTKRVLG+ EFLDDSHFTN+ESA VALGCKEC
Sbjct: 138 EMQDSPVVVALSLNYRENGCTIGLGFVDLTKRVLGMAEFLDDSHFTNVESAFVALGCKEC 197
Query: 571 ILPMDSAKSSESKSLHDTMSRCGVMVTERKKPEFKGRDVMQDLGRLVKGSKEPVRDLISG 750
ILP++S KS+E++ L D +++CGVM+TE+KK EFK RD++QDLGRLVKG EPVRDL+SG
Sbjct: 198 ILPIESGKSTENRMLCDVLTKCGVMLTEKKKSEFKTRDLVQDLGRLVKGPIEPVRDLVSG 257
Query: 751 FEFAPGALGALLSYTELLADENNYGSYILRQYNLDSYMRLDSAAMRALNVMESKTDANKT 930
FEFAPGALGALLSY ELLADE+NY +Y LR YNLDSYMRLDSAAMRALNV+ESKTDANK
Sbjct: 258 FEFAPGALGALLSYAELLADESNYENYTLRSYNLDSYMRLDSAAMRALNVLESKTDANKN 317
Query: 931 FSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNHINCRLDLVQAFVDDTELRQNLRQHLKR 1110
FSLFGLMNRTCTAGMGKRLLH+WLKQPL+DV IN RLD+VQAFV+DT LRQ+LRQHLKR
Sbjct: 318 FSLFGLMNRTCTAGMGKRLLHVWLKQPLVDVKEINSRLDIVQAFVEDTALRQDLRQHLKR 377
Query: 1111 ISDMERLMRNVEKKRANLVHIVKLYQTSIRLPYIKSALERYDGQFASLIKERYLDSLDLW 1290
ISD+ERLM N++K+RA L HIVKLYQ+SIRLPYIKSALERYDGQF+++++ RYL+ ++LW
Sbjct: 378 ISDIERLMHNIQKRRAGLQHIVKLYQSSIRLPYIKSALERYDGQFSTMMRSRYLEPIELW 437
Query: 1291 TDDKHLNKFLALVEVSVDLDQLANGEYMISPSYDVNLSSLKDEQESLEMQINELHKQT 1464
TDD+HLNKF+ LVE SVDLDQL N EYMISPSYD L++LKD+QE LE QI LH+QT
Sbjct: 438 TDDEHLNKFIGLVEASVDLDQLENREYMISPSYDSILANLKDQQELLESQIQNLHRQT 495