BLASTX nr result

ID: Bupleurum21_contig00016973 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016973
         (544 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310550.1| predicted protein [Populus trichocarpa] gi|2...   149   4e-34
ref|XP_002307069.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-31
ref|XP_002264408.2| PREDICTED: LMBR1 domain-containing protein 2...   139   2e-31
ref|XP_002534523.1| conserved hypothetical protein [Ricinus comm...   135   5e-30
ref|XP_003601923.1| LMBR1 domain-containing protein-like protein...   131   8e-29

>ref|XP_002310550.1| predicted protein [Populus trichocarpa] gi|222853453|gb|EEE91000.1|
           predicted protein [Populus trichocarpa]
          Length = 597

 Score =  149 bits (375), Expect = 4e-34
 Identities = 83/156 (53%), Positives = 108/156 (69%), Gaps = 6/156 (3%)
 Frame = -1

Query: 532 GIDLETASNSTDSSVVEMKTTSSLHENELKESSSAS--GEARRYSGHREAISSKYAAIRE 359
           G+D+E+ SNS + + VEMK TSSL   + K S S S   E++RY   REA+S+KYAA RE
Sbjct: 418 GVDMESGSNSIERTAVEMKATSSLGIEDRKGSQSKSLKEESQRYGTSREAVSNKYAAFRE 477

Query: 358 QNWKPDNMKPVEDPDA----SLLDAAESQATNVTGGPSSSLASRWATMKSGFQTLKTTIG 191
           QN +  NM+ VE   A    SLLD  +S + N T GP + LAS+W +MK+GFQ+ K  IG
Sbjct: 478 QN-RQANMRLVEKNVAAAKVSLLDDEDSHSNNTTAGPPAGLASKWESMKNGFQSFKANIG 536

Query: 190 AKKFLPLRQVEDPQHIPHVSSPESLDDIFQRLKRPN 83
           AKKFLPLRQ ++PQ +   SS +SLD+IFQRLKRP+
Sbjct: 537 AKKFLPLRQTQEPQLVSRNSSSQSLDEIFQRLKRPS 572


>ref|XP_002307069.1| predicted protein [Populus trichocarpa] gi|222856518|gb|EEE94065.1|
           predicted protein [Populus trichocarpa]
          Length = 617

 Score =  140 bits (354), Expect = 1e-31
 Identities = 78/154 (50%), Positives = 106/154 (68%), Gaps = 4/154 (2%)
 Frame = -1

Query: 532 GIDLETASNSTDSSVVEMKTTSSLHENELKESSSAS-GEARRYSGHREAISSKYAAIREQ 356
           G+D+ET SNSTD +   MK TSSL  +E K S +    E++RY+  +EAIS+KYAA+R Q
Sbjct: 454 GVDVETGSNSTDRTAAGMKATSSLASDERKGSRARPLKESQRYNTSKEAISNKYAAVRAQ 513

Query: 355 NWKPDNMKPVEDPDAS---LLDAAESQATNVTGGPSSSLASRWATMKSGFQTLKTTIGAK 185
           + +  N +PVE+  ++   LLDA  S + N T GP + LA +W +MK+GFQ+ K  IGA 
Sbjct: 514 S-RHANTRPVENIASAKVPLLDAGSSHSHNTTAGPLAGLAFKWESMKNGFQSFKVNIGAN 572

Query: 184 KFLPLRQVEDPQHIPHVSSPESLDDIFQRLKRPN 83
           KFLPLRQ ++PQ   H SS + LD+IFQRLKRP+
Sbjct: 573 KFLPLRQAQEPQLGSHDSSSQPLDEIFQRLKRPS 606


>ref|XP_002264408.2| PREDICTED: LMBR1 domain-containing protein 2 homolog A-like [Vitis
            vinifera] gi|297741834|emb|CBI33147.3| unnamed protein
            product [Vitis vinifera]
          Length = 736

 Score =  139 bits (351), Expect = 2e-31
 Identities = 76/161 (47%), Positives = 108/161 (67%), Gaps = 8/161 (4%)
 Frame = -1

Query: 544  FRDLGIDLETASNSTDSSVVEMKTTSSLHENELK--ESSSASGEARRYSGHREAISSKYA 371
            F +  +D+E++SN TDS+VVEMK  ++L ++ +    S     + R+Y  ++EAIS+KYA
Sbjct: 552  FNNTSMDVESSSNITDSTVVEMKAPTNLTKDGMTGGPSKPLKDDVRKYGANKEAISNKYA 611

Query: 370  AIREQNWKPDNMKPVE----DPDASLLDAAE--SQATNVTGGPSSSLASRWATMKSGFQT 209
            A+REQ+    N KPVE        SLL A    S+ +N TGGPSS LA+ W +MK+GFQ+
Sbjct: 612  AVREQSRLASNKKPVEKNITSAKVSLLGAGNTASENSNATGGPSSGLAATWQSMKTGFQS 671

Query: 208  LKTTIGAKKFLPLRQVEDPQHIPHVSSPESLDDIFQRLKRP 86
             +  I AKKF+PLR V++ + +  +SS ESLD+IFQRLKRP
Sbjct: 672  FRANIEAKKFMPLRNVQENKLVSRISSSESLDEIFQRLKRP 712


>ref|XP_002534523.1| conserved hypothetical protein [Ricinus communis]
           gi|223525111|gb|EEF27859.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 670

 Score =  135 bits (339), Expect = 5e-30
 Identities = 76/146 (52%), Positives = 103/146 (70%), Gaps = 6/146 (4%)
 Frame = -1

Query: 499 DSSVVEMKTTSSLHENELKESSSA--SGEARRYSGHREAISSKYAAIREQNWKPDNMKPV 326
           + + VEMK+T+S   +  K SSS     E RRYS  R+AIS+KYAA+REQ+ +  N +PV
Sbjct: 505 ERTAVEMKSTTSSVTDAAKGSSSTPLKEEGRRYSSSRDAISNKYAAMREQS-RHTNTRPV 563

Query: 325 EDPDAS----LLDAAESQATNVTGGPSSSLASRWATMKSGFQTLKTTIGAKKFLPLRQVE 158
           E   AS    LLDA  S++ N T GPSS LA++W +MK+GFQ+ K  IGAK+FLPLRQ++
Sbjct: 564 EKSIASAKVSLLDAGNSESNNTTVGPSSGLATKWESMKNGFQSFKANIGAKRFLPLRQMQ 623

Query: 157 DPQHIPHVSSPESLDDIFQRLKRPNH 80
           + + +   SS ESLD+IFQRLKRP++
Sbjct: 624 ESKLVSRNSSSESLDEIFQRLKRPSN 649


>ref|XP_003601923.1| LMBR1 domain-containing protein-like protein [Medicago truncatula]
            gi|355490971|gb|AES72174.1| LMBR1 domain-containing
            protein-like protein [Medicago truncatula]
          Length = 720

 Score =  131 bits (329), Expect = 8e-29
 Identities = 78/154 (50%), Positives = 96/154 (62%), Gaps = 4/154 (2%)
 Frame = -1

Query: 532  GIDLETASNSTDSSVVEMKTTSSLHENELKE--SSSASGEARRYSGHREAISSKYAAIRE 359
            G+D+E+ +N  + + VEMKTTS L   E+    S +   E RRY   REAISSKYAAIR 
Sbjct: 558  GLDIESGNNYVERNGVEMKTTSDLITEEVNGGISKTMDEETRRYGSSREAISSKYAAIRG 617

Query: 358  QNWKPDNMKPVEDPDASL--LDAAESQATNVTGGPSSSLASRWATMKSGFQTLKTTIGAK 185
            Q      +K  E   AS   LD   S + N  G PSS LAS W TMK+GFQ+ K+ IGAK
Sbjct: 618  QGGSSSKLKAEEKNVASYSGLDEGSSNSRNSAGAPSSGLASTWQTMKTGFQSFKSNIGAK 677

Query: 184  KFLPLRQVEDPQHIPHVSSPESLDDIFQRLKRPN 83
            KFLPLRQ  +   +   SS ESLD+IFQRLK+P+
Sbjct: 678  KFLPLRQTLE-NTVSRGSSSESLDEIFQRLKQPS 710


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