BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016952
         (1090 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512880.1| protein with unknown function [Ricinus commu...   260   5e-67
ref|XP_002273840.1| PREDICTED: shikimate kinase, chloroplastic [...   258   2e-66
ref|XP_002328924.1| shikimate kinase [Populus trichocarpa] gi|22...   252   1e-64
gb|AFK43498.1| unknown [Lotus japonicus]                              242   1e-61
ref|XP_002877000.1| shikimate kinase family protein [Arabidopsis...   233   6e-59

>ref|XP_002512880.1| protein with unknown function [Ricinus communis]
           gi|223547891|gb|EEF49383.1| protein with unknown
           function [Ricinus communis]
          Length = 292

 Score =  260 bits (664), Expect = 5e-67
 Identities = 139/237 (58%), Positives = 175/237 (73%)
 Frame = -3

Query: 917 RKFTTPTYSLGDDGASGSITEIAEVNTDSAAKRKAKDIASELRGTSIYLVGMKSKIKTSV 738
           R   + T SL D+  + S TE+  +++  A K++A DI+ EL+GTSI+LVGM+S +KTS+
Sbjct: 57  RPSLSTTCSLSDETTT-STTEVTVLDSSLALKKRAADISPELKGTSIFLVGMRSSMKTSL 115

Query: 737 GKFIAETLRYYFFDSDNLIEEXXXXXXXAKSLMERDEKGFRESETEILKQLSSMGRLVVS 558
           GK +A++LRYY+FDSD+L+EE       AKS  E DEKGFRESETE+LKQLSSMGRLVV 
Sbjct: 116 GKLLADSLRYYYFDSDSLVEEVASGASAAKSFKETDEKGFRESETEVLKQLSSMGRLVVC 175

Query: 557 AGNGAVESATNLSLLRHGILIWIDIPLDMXXXXXXXXXXXXXXXXXXXLNQLTALYKQMQ 378
           AG+GAV+S TNL+LLRHGI +WID+PLDM                   L +L A ++ M+
Sbjct: 176 AGDGAVQSFTNLALLRHGISLWIDVPLDMVAQAMSEESDQLSGADSEELTELIATFEAMR 235

Query: 377 GGYATADATISLQKLSQQLGYDALDAVTIEDMGFEVLKEIGKLMRVKKLMEEAARPF 207
           GGYATADATISLQK++  LGYDALD+VT EDM  EVLKEI KL RVKK++EEAARPF
Sbjct: 236 GGYATADATISLQKVAVNLGYDALDSVTAEDMTLEVLKEIEKLTRVKKMLEEAARPF 292


>ref|XP_002273840.1| PREDICTED: shikimate kinase, chloroplastic [Vitis vinifera]
           gi|296082301|emb|CBI21306.3| unnamed protein product
           [Vitis vinifera]
          Length = 305

 Score =  258 bits (659), Expect = 2e-66
 Identities = 141/261 (54%), Positives = 179/261 (68%), Gaps = 12/261 (4%)
 Frame = -3

Query: 953 SLSPNKPRRLSSRKFTTPTYSLGDDGASGSITEIAEVNTDSAAKRKAKDIASELRGTSIY 774
           SL P  P   SS K  + T+SL D  +S S T++ +V+   A K+KA +I+  L+GTSI+
Sbjct: 45  SLCPCVPPLTSSPKSLSITFSLPDGASSISATKVVDVDLSLAVKKKAMEISPVLKGTSIF 104

Query: 773 LVGMKSKIKTSVGKFIAETLRYYFFDSDNLIEEXXXXXXXAKSLMERDEKGFRESETEIL 594
           LVGM S IKT+VGK +A+ LRYY FDSD+L+EE       AKSL E+DEKGF +SETE+L
Sbjct: 105 LVGMNSTIKTNVGKLLADALRYYHFDSDSLVEEACGGESAAKSLKEQDEKGFHDSETEVL 164

Query: 593 KQLSSMGRLVVSAGNGAVESATNLSLLRHGILIWIDIPLDMXXXXXXXXXXXXXXXXXXX 414
           KQLSSMGRLVV AG+G V+S+TNL+LLRHGI IWID+P++M                   
Sbjct: 165 KQLSSMGRLVVCAGDGLVQSSTNLALLRHGISIWIDVPIEMVAKNMIEEGVQIPVTELST 224

Query: 413 LN------------QLTALYKQMQGGYATADATISLQKLSQQLGYDALDAVTIEDMGFEV 270
                         QL  +Y++M+GGYATADA++SLQK++ QLGYD LDAVT EDM  EV
Sbjct: 225 AESYSETGDNQVFAQLAVVYEEMKGGYATADASVSLQKVASQLGYDDLDAVTTEDMAMEV 284

Query: 269 LKEIGKLMRVKKLMEEAARPF 207
           LKEI +L R+KK+MEEAARPF
Sbjct: 285 LKEIQRLTRLKKMMEEAARPF 305


>ref|XP_002328924.1| shikimate kinase [Populus trichocarpa] gi|222839354|gb|EEE77691.1|
            shikimate kinase [Populus trichocarpa]
          Length = 286

 Score =  252 bits (644), Expect = 1e-64
 Identities = 147/290 (50%), Positives = 196/290 (67%), Gaps = 3/290 (1%)
 Frame = -3

Query: 1067 KMMVTSTVAGASANYNISLLHSKFTTFNLIPQ-FSNTPFSLSPNKPRRLSSRKFTTPTYS 891
            K   TST+A A  N ++S L S   T    P+ +S++ FS  P   R  S     T T S
Sbjct: 5    KATATSTLAAAIHNLSLSSLSS---TIRPRPRPYSHSGFSKFPLVSRPTS----LTATCS 57

Query: 890  LGDDGASGSITEIAEVNTDSAAKRKAKDIASELRGTSIYLVGMKSKIKTSVGKFIAETLR 711
            L ++  + S T++A  +T    K++A D++ EL+GTSI+L+GM+  +KT++GK +A+ LR
Sbjct: 58   LPNETTT-STTKVAGADTSLQVKKRAADLSPELKGTSIFLLGMRGPLKTNLGKLLADALR 116

Query: 710  YYFFDSDNLIEEXXXXXXXAKSLMERDEKGFRESETEILKQLSSMGRLVVSAGNGAVESA 531
            YYFF+SD+L+EE       A+SL ERDEKGFRESETE+LKQL+SMGRLVV AG+GAV+S+
Sbjct: 117  YYFFNSDSLVEEAAGGEFAARSLKERDEKGFRESETEVLKQLTSMGRLVVCAGDGAVQSS 176

Query: 530  TNLSLLRHGILIWIDIPLDM--XXXXXXXXXXXXXXXXXXXLNQLTALYKQMQGGYATAD 357
            TNL LLRHGI +WID+PLD+                     L Q+ A Y++++ GYATAD
Sbjct: 177  TNLGLLRHGISLWIDVPLDIVARGVVEDKTQLAASESHSEVLEQVVATYEELRAGYATAD 236

Query: 356  ATISLQKLSQQLGYDALDAVTIEDMGFEVLKEIGKLMRVKKLMEEAARPF 207
            A ISLQ ++ +LGYD LD+VT ED+  EVLKEI KL RVKK+MEEAARPF
Sbjct: 237  AKISLQNIAVKLGYDELDSVTTEDLALEVLKEIEKLTRVKKMMEEAARPF 286


>gb|AFK43498.1| unknown [Lotus japonicus]
          Length = 280

 Score =  242 bits (617), Expect = 1e-61
 Identities = 126/220 (57%), Positives = 158/220 (71%)
 Frame = -3

Query: 866 SITEIAEVNTDSAAKRKAKDIASELRGTSIYLVGMKSKIKTSVGKFIAETLRYYFFDSDN 687
           S++ +   +   A K+KA D++ ELRGTSI+LVGMK  +KTS+GK + E LRYY+FDSD+
Sbjct: 63  SVSNVGATDLSLAVKKKAADVSPELRGTSIFLVGMKGSLKTSLGKLLVEALRYYYFDSDS 122

Query: 686 LIEEXXXXXXXAKSLMERDEKGFRESETEILKQLSSMGRLVVSAGNGAVESATNLSLLRH 507
           L+EE       A S+ + DEKGF ESETE+LKQLSSMGRLVV AGNGAV+S TNL+LLRH
Sbjct: 123 LVEEALGGVSAANSVRQSDEKGFSESETEVLKQLSSMGRLVVCAGNGAVQSKTNLALLRH 182

Query: 506 GILIWIDIPLDMXXXXXXXXXXXXXXXXXXXLNQLTALYKQMQGGYATADATISLQKLSQ 327
           GI +WID+PLD+                   +N+L ALY + + GYATADA ISLQK++ 
Sbjct: 183 GISLWIDVPLDI--VARDVIEDQSQFAAFEEVNELGALYNKYKDGYATADAIISLQKVAS 240

Query: 326 QLGYDALDAVTIEDMGFEVLKEIGKLMRVKKLMEEAARPF 207
           +LGYD LD +T EDM  E L+EI KL RVKK+MEEAARPF
Sbjct: 241 RLGYDNLDDITKEDMALEALREIEKLTRVKKMMEEAARPF 280


>ref|XP_002877000.1| shikimate kinase family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297322838|gb|EFH53259.1| shikimate kinase family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 280

 Score =  233 bits (594), Expect = 6e-59
 Identities = 132/257 (51%), Positives = 169/257 (65%)
 Frame = -3

Query: 977 PQFSNTPFSLSPNKPRRLSSRKFTTPTYSLGDDGASGSITEIAEVNTDSAAKRKAKDIAS 798
           P  S  P   S    R +SS     P+ SL D  AS  I+ + + +     KRKA DIA 
Sbjct: 27  PTTSYKPLLSSSFSNRLISSHSRIAPSQSLADQSASTGIS-VVDSDPIDVVKRKAMDIAP 85

Query: 797 ELRGTSIYLVGMKSKIKTSVGKFIAETLRYYFFDSDNLIEEXXXXXXXAKSLMERDEKGF 618
           EL+G SI+LVG+ + IKT+ GK +AE LRYY+FDSDNLI E       A++L E DEK F
Sbjct: 86  ELKGASIFLVGINNSIKTNTGKLLAEALRYYYFDSDNLITEAAGGNVSAQALKEADEKAF 145

Query: 617 RESETEILKQLSSMGRLVVSAGNGAVESATNLSLLRHGILIWIDIPLDMXXXXXXXXXXX 438
           +ESETE+LKQLSSMGRLVV AG+GAV+S TNL+LLRHGI IWID+PLD+           
Sbjct: 146 QESETEVLKQLSSMGRLVVCAGDGAVQSLTNLALLRHGISIWIDVPLDI--AAKGDDDSF 203

Query: 437 XXXXXXXXLNQLTALYKQMQGGYATADATISLQKLSQQLGYDALDAVTIEDMGFEVLKEI 258
                    + L A Y++ + GY TADA+ISL+K++ +L ++ L+AV  ED+  EVLKEI
Sbjct: 204 NSEPSPELFDTLKASYEKSRKGYETADASISLEKIATKLEFEDLEAVASEDIALEVLKEI 263

Query: 257 GKLMRVKKLMEEAARPF 207
            KL RVKK+MEEA+RPF
Sbjct: 264 EKLTRVKKMMEEASRPF 280