BLASTX nr result

ID: Bupleurum21_contig00016892 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016892
         (1249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310987.1| predicted protein [Populus trichocarpa] gi|2...   132   2e-28
ref|XP_002327345.1| predicted protein [Populus trichocarpa] gi|2...   127   8e-27
ref|XP_002333910.1| predicted protein [Populus trichocarpa] gi|2...   118   4e-24
ref|XP_002310986.1| predicted protein [Populus trichocarpa] gi|2...   117   5e-24
ref|XP_002333768.1| predicted protein [Populus trichocarpa] gi|2...   101   5e-19

>ref|XP_002310987.1| predicted protein [Populus trichocarpa] gi|222850807|gb|EEE88354.1|
            predicted protein [Populus trichocarpa]
          Length = 396

 Score =  132 bits (331), Expect = 2e-28
 Identities = 101/318 (31%), Positives = 151/318 (47%), Gaps = 3/318 (0%)
 Frame = -3

Query: 1049 ILSNLLQDLLIDILCRLPE-KDLYKCKSLSHKLYDFITFTCIPFLLSKTTILCPNGLFFS 873
            + S+L  D+L++ILCR+ + K L + KS+     + IT  C+P + + + +   +G    
Sbjct: 21   LCSSLPDDVLVEILCRVTDRKHLIRLKSVCKSWNNLITDACVPKISASSPL---HGFI-- 75

Query: 872  QFPLPIPGTDNPYLPPNVGWFSPLETVVDLDINNCY*AVNKLAYSSYLHIFVAKELDVDF 693
                        YL   +G+  P    +   I          A +   H FV        
Sbjct: 76   ------------YLAKKIGFGKPYIDYIPCAITP--------AVAPEPHEFVKS------ 109

Query: 692  DITPKIMYVSSLLPFKHHSRDLLDVCNGLLLFAKPPTCRLYVCNPTTKQCISIPKLCDHR 513
                     SSLLPF+    D LD CNGLLLF +  T + YVCNP TK C++IP+  D  
Sbjct: 110  --------YSSLLPFEPARGDFLDCCNGLLLFVEGCTLQYYVCNPATKHCVAIPR--DFM 159

Query: 512  PCISRFSMLAFDPSVSTHYKIVRVPLFEQDTLSLDLDIFSSETGVWVRHTVQLNESNNLQ 333
                 F+ LAFDPS S HY++V    + +    + L +FSSETG W  +      SN  +
Sbjct: 160  LENIIFAALAFDPSTSPHYRVVCFD-YSESRPPVRLQVFSSETGNWTGNETPFGYSN--K 216

Query: 332  GFSLVKNAAYLDGILYRLLSFNSRKLVSIDLDSVDIHVIDLPVVEKLCV--PGCIGVSRG 159
               +VK+  YLDG LY + +  S+ ++  DL+  +   I+LP  E+L     GC+G  RG
Sbjct: 217  KCKVVKHCIYLDGALYCIST--SKHIICFDLNRGNSRAIELPEKERLDPNGSGCVGQWRG 274

Query: 158  RLFYAHREPHSFHIWYLD 105
             L Y      +F+ W L+
Sbjct: 275  HLCYTDLVGTAFYFWLLE 292


>ref|XP_002327345.1| predicted protein [Populus trichocarpa] gi|222835715|gb|EEE74150.1|
            predicted protein [Populus trichocarpa]
          Length = 391

 Score =  127 bits (318), Expect = 8e-27
 Identities = 104/326 (31%), Positives = 158/326 (48%), Gaps = 15/326 (4%)
 Frame = -3

Query: 1037 LLQDLLIDILCRLPEKDLYKCKSLSHKLYDFITFTCIPFLLSKTTILCPNG-LFFSQFPL 861
            L  D++++ILCRLP K + + K +S   +  I+  C P L S      P+G LF   F +
Sbjct: 5    LPDDMIVEILCRLPVKVVMRLKVVSKAWHRLISNVCAP-LFSAAAAAHPSGFLFLCSFQI 63

Query: 860  PIPGTDNPYLPPNVGWFSPLETVVDLDINNCY*AVNKLAYSSYLHIFVAKELDVDFDITP 681
             I G         +G+F+                    AY+SY  +      D       
Sbjct: 64   -IGG---------LGYFA--------------------AYASYPDV-----RDCVGQTDG 88

Query: 680  KIMYVSSLLPFKHHSRDLLDVCNGLLLFAKPPTCRL-----YVCNPTTKQCISIPKLCDH 516
             +   + +LPF   S    D CNGLLLF +           +VCN TT+QC++IP   + 
Sbjct: 89   FVDSYACMLPFMLSSDHYFDCCNGLLLFVRREQREALPHYYFVCNTTTRQCVAIP---NP 145

Query: 515  RPCISRFSM-LAFDPSVSTHYKIVR-VPLFEQDTLSLDLDIFSSETGVWVRHTVQLNESN 342
            RP  + F+  +A+DP+ S HYK+VR + L E+ +  + LDIFSS+TG WVR  V L+   
Sbjct: 146  RPRTAPFAAAIAYDPAKSPHYKVVRFIYLEEKTSCPVKLDIFSSDTGKWVRRGVMLSTEL 205

Query: 341  NLQG-----FSLVKNAAYLDGILYRLLSFNSRKLVSIDLDSVDIHVIDLPVVEKLCVPGC 177
             L       +  ++ + YLDG++Y+ LSF    L+  DL++     I+LP        G 
Sbjct: 206  PLAAADADKYGCIRRSIYLDGMIYK-LSFVVNYLIRFDLNAPSDVAIELPHKNAAACHGF 264

Query: 176  IGVSRGRLFYAHREPHS--FHIWYLD 105
            IG+SRG L+Y++ +       IW L+
Sbjct: 265  IGMSRGSLYYSNHDESGLMISIWLLE 290


>ref|XP_002333910.1| predicted protein [Populus trichocarpa] gi|222838910|gb|EEE77261.1|
            predicted protein [Populus trichocarpa]
          Length = 391

 Score =  118 bits (295), Expect = 4e-24
 Identities = 101/326 (30%), Positives = 158/326 (48%), Gaps = 15/326 (4%)
 Frame = -3

Query: 1037 LLQDLLIDILCRLPEKDLYKCKSLSHKLYDFITFTCIPFLLSKTTILCPNG-LFFSQFPL 861
            L  +++++IL +LP K + + K +S   +  I+  C P L S      P+G LF   F +
Sbjct: 5    LPDNIIVEILYQLPVKVVMRLKVVSKTWHRLISNVCAP-LFSAAAAAHPSGFLFLCSFQI 63

Query: 860  PIPGTDNPYLPPNVGWFSPLETVVDLDINNCY*AVNKLAYSSYLHIFVAKELDVDFDITP 681
             I G         +G+F+                    AY+SY  +         F    
Sbjct: 64   -IGG---------LGYFA--------------------AYASYPDVHDCVGQTDGF---- 89

Query: 680  KIMYVSSLLPFKHHSRDLLDVCNGLLLFAKPPTCR-----LYVCNPTTKQCISIPKLCDH 516
             +   + +LPF   S    D CNGLLLF +           +VCN TT+QC++IP   + 
Sbjct: 90   -VDSYACMLPFMLSSDHYFDCCNGLLLFVRREQREDLPHYYFVCNTTTRQCVAIP---NP 145

Query: 515  RPCISRFSM-LAFDPSVSTHYKIVR-VPLFEQDTLSLDLDIFSSETGVWVRHTVQLNESN 342
            RP  + F+  +A+DP+ S HYK+VR + L E+ +  + LDIFSS+TG WVR  V L+   
Sbjct: 146  RPRTAPFAAAIAYDPAKSPHYKVVRFIYLEEKTSCPVKLDIFSSDTGKWVRRGVMLSTEL 205

Query: 341  NLQG-----FSLVKNAAYLDGILYRLLSFNSRKLVSIDLDSVDIHVIDLPVVEKLCVPGC 177
             L       +  ++ + YLDG++Y+ LSF    L+  DL++     I+LP        G 
Sbjct: 206  PLAAADADKYGCIRRSIYLDGMIYK-LSFVVNYLIRFDLNAPSDVAIELPHKNAADRHGF 264

Query: 176  IGVSRGRLFYAHREPHS--FHIWYLD 105
            IG+SRG L+Y++++       IW L+
Sbjct: 265  IGMSRGSLYYSNQDESGLMISIWLLE 290


>ref|XP_002310986.1| predicted protein [Populus trichocarpa] gi|222850806|gb|EEE88353.1|
           predicted protein [Populus trichocarpa]
          Length = 531

 Score =  117 bits (294), Expect = 5e-24
 Identities = 78/199 (39%), Positives = 103/199 (51%), Gaps = 12/199 (6%)
 Frame = -3

Query: 665 SSLLPFKHHSRDLLDVCNGLLLFAKPPTCRLYVCNPTTKQCISIPKLCDHRPCISRFSML 486
           SSLLPF     D LD CNGLLLF + P  R YVCNP TKQC++IP+  D        + L
Sbjct: 106 SSLLPFDLARGDFLDCCNGLLLFVEGPIPRYYVCNPVTKQCVAIPR--DFTLENICTASL 163

Query: 485 AFDPSVSTHYKIVRVPLFEQDTLS--LDLDIFSSETGVWVRHTVQLNESNNLQGFSLVKN 312
           AFDP  S HY++V    F+   L     L +FSSETG W          +      L K+
Sbjct: 164 AFDPFKSPHYRVV---CFDYSKLKPPQKLRVFSSETGSWTIQETAFGYGSKKS--RLAKH 218

Query: 311 AAYLDGILYRLLS--------FNSRKLVSIDLDSVDIHVIDLPVVEKLCVP--GCIGVSR 162
             YLDG+LYR  +         +S++L+  DL+  +   I+LP  E+L     GCIG+SR
Sbjct: 219 CIYLDGVLYRQTASKQIDSKQIDSKRLLCFDLNRGNSRAIELPEKERLAPNDYGCIGLSR 278

Query: 161 GRLFYAHREPHSFHIWYLD 105
             L Y+     + H W L+
Sbjct: 279 RHLCYSDLVGTALHFWLLE 297


>ref|XP_002333768.1| predicted protein [Populus trichocarpa] gi|222838455|gb|EEE76820.1|
            predicted protein [Populus trichocarpa]
          Length = 280

 Score =  101 bits (251), Expect = 5e-19
 Identities = 86/275 (31%), Positives = 123/275 (44%), Gaps = 3/275 (1%)
 Frame = -3

Query: 1049 ILSNLLQDLLIDILCRLPE-KDLYKCKSLSHKLYDFITFTCIPFLLSKTTILCPNGLFFS 873
            + S+L  D+L++ILCR+ + K L + KS+     + IT  C+P + + + +   +G  + 
Sbjct: 21   LCSSLPDDVLVEILCRVTDGKHLIRLKSVCKCWNNLITDACVPKISASSPL---HGFIYH 77

Query: 872  QFPLPIPGTDNPYLPPNVGWFSPLETVVDLDINNCY*AVNKLAYSSYLHIFVAKELDVDF 693
               +    T   Y+P                           A +   H FV        
Sbjct: 78   ALRVSSRKTYIDYIP----------------------CAMTPAVAPEPHEFVKS------ 109

Query: 692  DITPKIMYVSSLLPFKHHSRDLLDVCNGLLLFAKPPTCRLYVCNPTTKQCISIPKLCDHR 513
                     SSLLPF     D LD CNGLLLF + P  R YVCNP TKQC++IP+  D  
Sbjct: 110  --------YSSLLPFDLARGDFLDCCNGLLLFVEGPIPRYYVCNPVTKQCVAIPR--DFT 159

Query: 512  PCISRFSMLAFDPSVSTHYKIVRVPLFEQDTLS--LDLDIFSSETGVWVRHTVQLNESNN 339
                  + LAFDP  S HY++V    F+   L     L +FSSETG W          + 
Sbjct: 160  LENICTASLAFDPFKSPHYRVV---CFDYSKLKPPQKLRVFSSETGSWTIQETAFGYGSK 216

Query: 338  LQGFSLVKNAAYLDGILYRLLSFNSRKLVSIDLDS 234
                 L K+  YLDG+LYR  +  S+++ S  +DS
Sbjct: 217  KS--RLAKHCIYLDGVLYRQTA--SKQIDSKQIDS 247


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