BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016882
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containi...   169   2e-40
ref|XP_002303960.1| predicted protein [Populus trichocarpa] gi|2...   160   1e-37
ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containi...   147   7e-34
ref|NP_172596.1| pentatricopeptide repeat-containing protein [Ar...   145   3e-33
ref|XP_002892635.1| pentatricopeptide repeat-containing protein ...   145   4e-33

>ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 849

 Score =  169 bits (428), Expect = 2e-40
 Identities = 77/100 (77%), Positives = 87/100 (87%)
 Frame = -1

Query: 303 DKNVFVMTALVDMYAKCGAVHTSRKLFDMMDYKHVTTWNVMIDGYGTHGLGKDAIELFHQ 124
           DKNVFV TALVDMYAKCGAVHT+RKLFDMMD +HVTTWN MIDGYGTHGLGK A+ELF +
Sbjct: 510 DKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEK 569

Query: 123 MLREDAKPNSITFLCIISACSHSGFVEEGKEYFTMMKKEY 4
           M +E  KPN +TFLC++SACSHSG VEEG +YF  MKK+Y
Sbjct: 570 MKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDY 609



 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 40/87 (45%), Positives = 58/87 (66%)
 Frame = -1

Query: 294 VFVMTALVDMYAKCGAVHTSRKLFDMMDYKHVTTWNVMIDGYGTHGLGKDAIELFHQMLR 115
           V V TALVDMY+KCG+V T+R +FD M  K V +WN MIDGY  +G    A+E+F +M+ 
Sbjct: 311 VNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMD 370

Query: 114 EDAKPNSITFLCIISACSHSGFVEEGK 34
           E  +  ++T +  + AC+  G VE+G+
Sbjct: 371 EQVEMTNVTVMGALHACADLGDVEQGR 397



 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 37/88 (42%), Positives = 54/88 (61%)
 Frame = -1

Query: 297 NVFVMTALVDMYAKCGAVHTSRKLFDMMDYKHVTTWNVMIDGYGTHGLGKDAIELFHQML 118
           NVF MT +V+MYAKC  V  + K+FD M  + +  WN +I GY  +G GK A+EL  +M 
Sbjct: 209 NVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQ 268

Query: 117 REDAKPNSITFLCIISACSHSGFVEEGK 34
            E  +P+SIT + I+ A +  G +  G+
Sbjct: 269 EEGKRPDSITIVSILPAVADVGSLRIGR 296



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 29/88 (32%), Positives = 53/88 (60%)
 Frame = -1

Query: 297 NVFVMTALVDMYAKCGAVHTSRKLFDMMDYKHVTTWNVMIDGYGTHGLGKDAIELFHQML 118
           +V VM +L+ MY+KC  V  + ++F+ + +K + +WN MI GY  +G   +AI+ F +M 
Sbjct: 411 DVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQ 470

Query: 117 REDAKPNSITFLCIISACSHSGFVEEGK 34
            ++ KP+S T + +I A +    + + K
Sbjct: 471 LQNIKPDSFTMVSVIPALAELSVLPQAK 498


>ref|XP_002303960.1| predicted protein [Populus trichocarpa] gi|222841392|gb|EEE78939.1|
           predicted protein [Populus trichocarpa]
          Length = 704

 Score =  160 bits (405), Expect = 1e-37
 Identities = 73/100 (73%), Positives = 84/100 (84%)
 Frame = -1

Query: 303 DKNVFVMTALVDMYAKCGAVHTSRKLFDMMDYKHVTTWNVMIDGYGTHGLGKDAIELFHQ 124
           DKNVFVMTALVDMYAKCGA+HT+RKLFDMM+ +HV TWN MIDGYGTHGLGK ++ELF +
Sbjct: 365 DKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKE 424

Query: 123 MLREDAKPNSITFLCIISACSHSGFVEEGKEYFTMMKKEY 4
           M +   KPN ITFLC +SACSHSG VEEG  +F  MKK+Y
Sbjct: 425 MKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDY 464



 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 40/87 (45%), Positives = 58/87 (66%)
 Frame = -1

Query: 294 VFVMTALVDMYAKCGAVHTSRKLFDMMDYKHVTTWNVMIDGYGTHGLGKDAIELFHQMLR 115
           V V TALVDMY+KCG+V  +R +FD MD++ V +WN MIDGY   G  + A+ +F +ML 
Sbjct: 166 VNVSTALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLD 225

Query: 114 EDAKPNSITFLCIISACSHSGFVEEGK 34
           E  +P ++T +  + AC+  G +E GK
Sbjct: 226 EGVQPTNVTVMGALHACADLGDLERGK 252



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 32/87 (36%), Positives = 51/87 (58%)
 Frame = -1

Query: 297 NVFVMTALVDMYAKCGAVHTSRKLFDMMDYKHVTTWNVMIDGYGTHGLGKDAIELFHQML 118
           N+F MT +V+MYAKC  ++ +  +FD M  + +  WN MI GY  +G  K A+ L  +M 
Sbjct: 64  NLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVLRMS 123

Query: 117 REDAKPNSITFLCIISACSHSGFVEEG 37
            E  +P+SIT + I+ A + +  +  G
Sbjct: 124 EEGHRPDSITIVSILPAVADTRLLRIG 150



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/90 (32%), Positives = 48/90 (53%)
 Frame = -1

Query: 303 DKNVFVMTALVDMYAKCGAVHTSRKLFDMMDYKHVTTWNVMIDGYGTHGLGKDAIELFHQ 124
           D +V VM +L+ MY+KC  V  +  +F  +  K + +WN MI GY  +G   +A+  F +
Sbjct: 264 DSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCE 323

Query: 123 MLREDAKPNSITFLCIISACSHSGFVEEGK 34
           M   + KP+S T + +I A +      + K
Sbjct: 324 MQSRNIKPDSFTMVSVIPALAELSIPRQAK 353


>ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 818

 Score =  147 bits (372), Expect = 7e-34
 Identities = 67/100 (67%), Positives = 81/100 (81%)
 Frame = -1

Query: 303 DKNVFVMTALVDMYAKCGAVHTSRKLFDMMDYKHVTTWNVMIDGYGTHGLGKDAIELFHQ 124
           D NVFV TALVDMYAKCGA+ T+RKLFDMM  +HV TWN MIDGYGTHG+GK+ ++LF++
Sbjct: 479 DNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKETLDLFNE 538

Query: 123 MLREDAKPNSITFLCIISACSHSGFVEEGKEYFTMMKKEY 4
           M +   KPN ITFL +ISACSHSGFVEEG   F  M+++Y
Sbjct: 539 MQKGAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQEDY 578



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 29/79 (36%), Positives = 50/79 (63%)
 Frame = -1

Query: 303 DKNVFVMTALVDMYAKCGAVHTSRKLFDMMDYKHVTTWNVMIDGYGTHGLGKDAIELFHQ 124
           + N+FVMTA++ +YAKC  +  + K+F+ M +K + +W  ++ GY  +G  K A++L  Q
Sbjct: 177 ESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQ 236

Query: 123 MLREDAKPNSITFLCIISA 67
           M     KP+S+T + I+ A
Sbjct: 237 MQEAGQKPDSVTLVSILPA 255



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 34/86 (39%), Positives = 50/86 (58%)
 Frame = -1

Query: 294 VFVMTALVDMYAKCGAVHTSRKLFDMMDYKHVTTWNVMIDGYGTHGLGKDAIELFHQMLR 115
           V V  AL+DMY KCG+   +R +F  M  K V +WN MIDG   +G  ++A   F +ML 
Sbjct: 281 VNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLD 340

Query: 114 EDAKPNSITFLCIISACSHSGFVEEG 37
           E   P  +T + ++ AC++ G +E G
Sbjct: 341 EGEVPTRVTMMGVLLACANLGDLERG 366



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 30/79 (37%), Positives = 47/79 (59%)
 Frame = -1

Query: 303 DKNVFVMTALVDMYAKCGAVHTSRKLFDMMDYKHVTTWNVMIDGYGTHGLGKDAIELFHQ 124
           D NV VM +L+ MY+KC  V  +  +F+ ++  +VT WN MI GY  +G  K+A+ LF  
Sbjct: 379 DSNVSVMNSLISMYSKCKRVDIAASIFNNLEKTNVT-WNAMILGYAQNGCVKEALNLFCM 437

Query: 123 MLREDAKPNSITFLCIISA 67
           M  +  K +  T + +I+A
Sbjct: 438 MQSQGIKLDCFTLVGVITA 456


>ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g11290 gi|332190592|gb|AEE28713.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 809

 Score =  145 bits (366), Expect = 3e-33
 Identities = 67/101 (66%), Positives = 79/101 (78%)
 Frame = -1

Query: 303 DKNVFVMTALVDMYAKCGAVHTSRKLFDMMDYKHVTTWNVMIDGYGTHGLGKDAIELFHQ 124
           DKNVFV TALVDMYAKCGA+  +R +FDMM  +HVTTWN MIDGYGTHG GK A+ELF +
Sbjct: 470 DKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEE 529

Query: 123 MLREDAKPNSITFLCIISACSHSGFVEEGKEYFTMMKKEYA 1
           M +   KPN +TFL +ISACSHSG VE G + F MMK+ Y+
Sbjct: 530 MQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYS 570



 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 39/90 (43%), Positives = 59/90 (65%)
 Frame = -1

Query: 303 DKNVFVMTALVDMYAKCGAVHTSRKLFDMMDYKHVTTWNVMIDGYGTHGLGKDAIELFHQ 124
           D  V + TALVDMYAKCG++ T+R+LFD M  ++V +WN MID Y  +   K+A+ +F +
Sbjct: 268 DSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQK 327

Query: 123 MLREDAKPNSITFLCIISACSHSGFVEEGK 34
           ML E  KP  ++ +  + AC+  G +E G+
Sbjct: 328 MLDEGVKPTDVSVMGALHACADLGDLERGR 357



 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 33/89 (37%), Positives = 55/89 (61%)
 Frame = -1

Query: 297 NVFVMTALVDMYAKCGAVHTSRKLFDMMDYKHVTTWNVMIDGYGTHGLGKDAIELFHQML 118
           ++F MT L +MYAKC  V+ +RK+FD M  + + +WN ++ GY  +G+ + A+E+   M 
Sbjct: 169 DLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMC 228

Query: 117 REDAKPNSITFLCIISACSHSGFVEEGKE 31
            E+ KP+ IT + ++ A S    +  GKE
Sbjct: 229 EENLKPSFITIVSVLPAVSALRLISVGKE 257



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 29/90 (32%), Positives = 49/90 (54%)
 Frame = -1

Query: 303 DKNVFVMTALVDMYAKCGAVHTSRKLFDMMDYKHVTTWNVMIDGYGTHGLGKDAIELFHQ 124
           D+NV V+ +L+ MY KC  V T+  +F  +  + + +WN MI G+  +G   DA+  F Q
Sbjct: 369 DRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQ 428

Query: 123 MLREDAKPNSITFLCIISACSHSGFVEEGK 34
           M     KP++ T++ +I+A +        K
Sbjct: 429 MRSRTVKPDTFTYVSVITAIAELSITHHAK 458


>ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297338477|gb|EFH68894.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 809

 Score =  145 bits (365), Expect = 4e-33
 Identities = 66/101 (65%), Positives = 80/101 (79%)
 Frame = -1

Query: 303 DKNVFVMTALVDMYAKCGAVHTSRKLFDMMDYKHVTTWNVMIDGYGTHGLGKDAIELFHQ 124
           DKNVFV TALVDMYAKCGA+  +R +FDMM  +HVTTWN MIDGYGTHG+GK A+ELF +
Sbjct: 470 DKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEE 529

Query: 123 MLREDAKPNSITFLCIISACSHSGFVEEGKEYFTMMKKEYA 1
           M +   +PN +TFL +ISACSHSG VE G + F MMK+ Y+
Sbjct: 530 MQKGTIRPNGVTFLSVISACSHSGLVEAGLKCFHMMKENYS 570



 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 39/90 (43%), Positives = 58/90 (64%)
 Frame = -1

Query: 303 DKNVFVMTALVDMYAKCGAVHTSRKLFDMMDYKHVTTWNVMIDGYGTHGLGKDAIELFHQ 124
           D  V + TALVDMYAKCG++ T+R LFD M  ++V +WN MID Y  +   K+A+ +F +
Sbjct: 268 DSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQK 327

Query: 123 MLREDAKPNSITFLCIISACSHSGFVEEGK 34
           ML E  KP  ++ +  + AC+  G +E G+
Sbjct: 328 MLDEGVKPTDVSVMGALHACADLGDLERGR 357



 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 34/89 (38%), Positives = 56/89 (62%)
 Frame = -1

Query: 297 NVFVMTALVDMYAKCGAVHTSRKLFDMMDYKHVTTWNVMIDGYGTHGLGKDAIELFHQML 118
           ++F MT L +MYAKC  VH +RK+FD M  + + +WN ++ GY  +G+ + A+E+ + M 
Sbjct: 169 DLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMC 228

Query: 117 REDAKPNSITFLCIISACSHSGFVEEGKE 31
            E+ KP+ IT + ++ A S    +  GKE
Sbjct: 229 EENLKPSFITIVSVLPAVSALRLIRIGKE 257



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 28/90 (31%), Positives = 49/90 (54%)
 Frame = -1

Query: 303 DKNVFVMTALVDMYAKCGAVHTSRKLFDMMDYKHVTTWNVMIDGYGTHGLGKDAIELFHQ 124
           D+NV V+ +L+ MY KC  V T+  +F  +  + + +WN MI G+  +G   +A+  F Q
Sbjct: 369 DRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQ 428

Query: 123 MLREDAKPNSITFLCIISACSHSGFVEEGK 34
           M     KP++ T++ +I+A +        K
Sbjct: 429 MQARTVKPDTFTYVSVITAIAELSITHHAK 458