BLASTX nr result

ID: Bupleurum21_contig00016861 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016861
         (2121 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK61864.1| hypothetical protein [Citrus unshiu]                  156   2e-35
emb|CBI20711.3| unnamed protein product [Vitis vinifera]              149   2e-33
ref|XP_003575832.1| PREDICTED: uncharacterized protein LOC100839...    88   8e-15
ref|XP_002279816.2| PREDICTED: uncharacterized protein LOC100252...    87   2e-14
ref|XP_001772167.1| predicted protein [Physcomitrella patens sub...    79   4e-12

>dbj|BAK61864.1| hypothetical protein [Citrus unshiu]
          Length = 827

 Score =  156 bits (394), Expect = 2e-35
 Identities = 131/432 (30%), Positives = 191/432 (44%), Gaps = 35/432 (8%)
 Frame = +2

Query: 17   LDDF---QGENDPVILPQNH---------VQEKGEDIKVSVTARYRKA-----DRTCYMC 145
            LD+F    GE+ P+ +             V   G D     + R RK      DRTCYMC
Sbjct: 400  LDEFAECHGESQPIHVEAEFSNKRKRGLWVDTSGADKSFIESGRNRKLSCPHQDRTCYMC 459

Query: 146  DAPDHFIRDCPFANGPDPMAQPGNSMYPVGAMATYATPYWNNSAYGPTRPFRTNYANPGM 325
             +P+H IRDCP A  P+PM Q GN+ +  GA+  +A P+WN  +    RP    Y N GM
Sbjct: 460  GSPNHLIRDCPAALSPNPMLQQGNAFF-AGALRGHAPPFWNGPSLAHVRPIANIYGNHGM 518

Query: 326  MPYNASMYPVSPMGVSPYMSSMYGHIPA------RAPGGISRMAGMGSLLGNRSGNPFSH 487
            MP+N +M P +   V  YM SM+G IPA       +  G + M G  + +G  +G     
Sbjct: 519  MPFNTTMAPTTQFAVPAYMPSMFGGIPAYGFDMEASCSGYTMMGGPRTPVGVNAGR-LGR 577

Query: 488  AEVFDTQNRDIKENHTNDYMMRRQPCDYEDDDLR-TGRYDSPVHSQEYLSYAERENS--- 655
            + V   Q+ + K+  +N  M  +   D ED+++    RYD    S +  S+  +E S   
Sbjct: 578  SRVLHHQDCEKKQKLSNINMSEQSYDDDEDENVNIKHRYDEAERSHDKKSHFSKERSVSF 637

Query: 656  --GSYLREKHSRR-SRVNEHFDRDVVHDRQRKKYGSLTGTRNRR-AYQDEKSIYGAINMS 823
              GS+    H R     N   DR     + +K   S    R RR  YQ    +    +M 
Sbjct: 638  SEGSFTHRSHKRHWCYSNLDDDRHSFDKKYKKNSSSSYPYRERRPCYQ----LSEVEDMP 693

Query: 824  NGSDRYEDEQHNYHPKIXXXXXXXXXXXXXXXXXXXXXXXK--YKRRDYSDDKSFGKKHG 997
            + S  + DE+H  H +                        K   +++  SD K    K  
Sbjct: 694  SSSSWHGDERHKKHSRQSKKHNEREQFHSDSSWSRHAVKEKDGERKKLKSDVKRHSHKPD 753

Query: 998  GQFRSSLKPGSSGDQKRRYREVNHIRSSKHSRDGAKYIRNE-LFCRSKMVR-RDEDYGGD 1171
                S L+P  S D+K++ +E +    S+HSR  +K + +E    R  MV+  DED+G D
Sbjct: 754  SCSESGLEPSYSSDRKKKQKEKDLSHGSRHSRHKSKSMDDEPSHDRWLMVKGSDEDHGED 813

Query: 1172 YRQPKRKRVY*K 1207
            YR  +RK  Y K
Sbjct: 814  YRYSERKSGYIK 825


>emb|CBI20711.3| unnamed protein product [Vitis vinifera]
          Length = 795

 Score =  149 bits (377), Expect = 2e-33
 Identities = 122/420 (29%), Positives = 190/420 (45%), Gaps = 26/420 (6%)
 Frame = +2

Query: 20   DDFQGENDPVILPQNHVQEK-----------------GEDIKVSVTARYRKADRTCYMCD 148
            DDFQGEN P  L ++ V E+                 G    +    R +K DR CY C 
Sbjct: 388  DDFQGENIPTNLCKSRVPEEADSTLKKKKELWVNASGGGQSVIPNNGRNKKGDRACYTCG 447

Query: 149  APDHFIRDCPFANGPDPMAQPGNSMYPVGAMATYATPYWNNSAYGPTRPFRTNYANPGMM 328
            +PDH +RDCP A   + M Q G +M+P G M   + PYWN +     R     Y NPGMM
Sbjct: 448  SPDHLMRDCPTALSQNAMLQTG-AMFP-GVMPGLS-PYWNGTPSPYGRSSVNMYGNPGMM 504

Query: 329  PYNASMYPVSPMGVSPYMSSMYGHIPARAPGGISRMAGMGSLLGNRSGNPFSHAEVFDTQ 508
             +NA+M PV+P  V  Y+ SMY  +P    GG   M G+   +G  +  P SH E  +  
Sbjct: 505  AFNATMVPVTPFAVPAYVPSMYCGLPVN--GGYMGMGGLAPPVGTSAERPLSHPEFSELH 562

Query: 509  NRDIKENHTNDYMMRRQPCDYEDDDL-RTGRYDSPVHSQEYLSYAERENSGSYLREKHS- 682
            +   K+   N  M R      ED+DL +  RY+    S  +  + ERE S S   +  + 
Sbjct: 563  DCRKKQKLLNRNMTRD-----EDEDLNKWYRYNDAERSHGHKPHIEREKSISDSEDSSTQ 617

Query: 683  ---RRSRVNEHFDRDVVH--DRQRKKYGSLTGTRNRRAYQDEKSIYGAINMSNGSDRYED 847
               R++R ++ FD D+ +  +R  K    + G R+R+ Y  E+S     +M   S  + +
Sbjct: 618  RLKRKNRHDKRFDDDIHYGDERHEKSSRPIVG-RDRKPYHTERSSLEIDDMPYSSSWHSE 676

Query: 848  EQHNYHPKIXXXXXXXXXXXXXXXXXXXXXXXKYKRRDYSDDKSFGKKHGGQFRSSLKPG 1027
            ++H  H +                        K+++ D  + K   +KH    +S  + G
Sbjct: 677  DRHKNHHE-SSKKHNDQRGQCSNDSSRSRHHTKHQKDDERNIKKQSEKHYSHSQSGSEQG 735

Query: 1028 SSGDQKRRYREVNHIRSSKHSRDGAKYIRNE-LFCRSKM-VRRDEDYGGDYRQPKRKRVY 1201
             +  Q ++ +E +      H R  AK + N+    R +M +  D D+  ++ + KRKRV+
Sbjct: 736  LATQQIKQVKERDSRHGLGHDRHNAKSMNNDNEHDRWQMAIGSDHDHRDEHPRHKRKRVH 795


>ref|XP_003575832.1| PREDICTED: uncharacterized protein LOC100839326 [Brachypodium
            distachyon]
          Length = 886

 Score = 88.2 bits (217), Expect = 8e-15
 Identities = 74/288 (25%), Positives = 117/288 (40%), Gaps = 9/288 (3%)
 Frame = +2

Query: 23   DFQGENDPVILPQNHVQEKGEDIK--VSVTARYRKADRTCYMCDAPDHFIRDCPFANGPD 196
            DFQ  +   +  QN  QE   D     +   R RK  RTCY C +P+H IR CP A+   
Sbjct: 351  DFQSASSSKMY-QNIAQESDADGNRFAAPVTRDRKGGRTCYRCGSPNHLIRYCPVASNE- 408

Query: 197  PMAQPGNSMYPVGAMATYATPYWNNSAYGPTRPFRTNYANPGMMPYNASMYPVSPMGVSP 376
               Q  +S +   A   Y  P W  S + P +P+  +Y  PG++P++  + P SP GV  
Sbjct: 409  ---QAEDSTFHGDA---YGPPNWQGSMFHPLQPYANSYGTPGVIPFDPGVVPASPFGVPS 462

Query: 377  YMSSMYGHIPARAPGGISRMAGMGSLLGNRSGNPFSHAEVFDT--QNRDIKENHTNDYMM 550
            YM   YG +  + P     M GM S +        +   + D         E    +Y  
Sbjct: 463  YMPPFYGRM--QNPYAFMGMRGMPSPVLPVLQQSHTGLGIHDNVKSQETPSERGGREYDC 520

Query: 551  RRQPCDYEDDDLRTGR--YDSPVHSQEYLSYAERENSGSYLREKHSRRSRVNEHF--DRD 718
                 DY DDD R     Y +  +S  Y           + ++K+   +R    +  +++
Sbjct: 521  DTISEDYPDDDGRRSHKLYPTEKNSDRYYDVGSTNVKKRHRKDKYCSPTREKRTYSSEQE 580

Query: 719  VVHDRQRKKYGSLTGTR-NRRAYQDEKSIYGAINMSNGSDRYEDEQHN 859
            +V  +   ++GS    R N    Q     +G  + S    +   +QH+
Sbjct: 581  LVDQKHSVEFGSCGRERTNHYCKQSASEWHGIPDNSIQDSKQRSKQHD 628


>ref|XP_002279816.2| PREDICTED: uncharacterized protein LOC100252571 [Vitis vinifera]
          Length = 577

 Score = 87.0 bits (214), Expect = 2e-14
 Identities = 45/99 (45%), Positives = 58/99 (58%)
 Frame = +2

Query: 110 RYRKADRTCYMCDAPDHFIRDCPFANGPDPMAQPGNSMYPVGAMATYATPYWNNSAYGPT 289
           R +K DR CY C +PDH +RDCP A   + M Q G +M+P G M   + PYWN +     
Sbjct: 479 RNKKGDRACYTCGSPDHLMRDCPTALSQNAMLQTG-AMFP-GVMPGLS-PYWNGTPSPYG 535

Query: 290 RPFRTNYANPGMMPYNASMYPVSPMGVSPYMSSMYGHIP 406
           R     Y NPGMM +NA+M PV+P  V  Y+ SMY  +P
Sbjct: 536 RSSVNMYGNPGMMAFNATMVPVTPFAVPAYVPSMYCGLP 574


>ref|XP_001772167.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162676498|gb|EDQ62980.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 784

 Score = 79.3 bits (194), Expect = 4e-12
 Identities = 68/231 (29%), Positives = 91/231 (39%), Gaps = 20/231 (8%)
 Frame = +2

Query: 110 RYRKADRTCYMCDAPDHFIRDC--PFANGPDPMAQPGNSMYPVGAMATYATP----YWNN 271
           + RK +R CY+C +PDHF RDC      GP P   P  +M+  G M     P     +N 
Sbjct: 271 KVRKGERVCYLCGSPDHFARDCIDHGGPGPGPYGGPHPAMFGPGGMPPMGVPPYGGAYNM 330

Query: 272 SAYGPTRPFR---------TNYANPGMMPYNASMYPVSPMGVSPY-MSSMYGHIPARAPG 421
             +GP  P            +   PGMMP++  M P    G  P+ M  MY  IP     
Sbjct: 331 EWHGPPMPPHGGPFGYGEGMHGPGPGMMPFDRPMMPGPGYGAPPFGMPPMYPGIPHH--- 387

Query: 422 GISRMAGMGSLLGNRSGNPFSHAEVFDTQNRDIKENHTNDYMMRRQPCDYEDDDL----R 589
           G  R  GM   +G     P S  E  + Q R  +E H    MM     ++  + L    R
Sbjct: 388 GYMRGPGM---MGMMDRPPLSREEFLEVQERQRQERHRQHRMMEHSEREWSPEALFPRDR 444

Query: 590 TGRYDSPVHSQEYLSYAERENSGSYLREKHSRRSRVNEHFDRDVVHDRQRK 742
               D  V  Q        E     L+E   RR    +H+D    HD +R+
Sbjct: 445 ERERDGNVRHQ------SPELESRRLKETRERRP---DHYDHVRKHDVERE 486


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