BLASTX nr result

ID: Bupleurum21_contig00016846 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016846
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232...    92   6e-17
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]            87   1e-15
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...    87   1e-15
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    86   2e-15
ref|XP_004173049.1| PREDICTED: putative ribonuclease H protein A...    86   3e-15

>ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232446, partial [Cucumis
           sativus]
          Length = 382

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 45/92 (48%), Positives = 57/92 (61%)
 Frame = -2

Query: 279 RFLRFAGCLQLIKSVLSAMQSYWAIHLFLPIGILKTVQGILSQFLWRGSSQNRAIHKVSW 100
           R L FAG LQL++SVL ++Q YWA    LP+ + + V  IL  +LWRG  + R   KV+W
Sbjct: 70  RVLSFAGRLQLVRSVLRSLQVYWASVFMLPMKVHRDVDKILRSYLWRGKEEGRGGAKVAW 129

Query: 99  VDCCLPMKEGGLGIRDPIEWNTAATHFQLWRL 4
            + CLP  EGGL IRD   WN A+T   LW L
Sbjct: 130 DEVCLPFDEGGLAIRDGSSWNIASTLKILWLL 161


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 42/90 (46%), Positives = 52/90 (57%)
 Frame = -2

Query: 273 LRFAGCLQLIKSVLSAMQSYWAIHLFLPIGILKTVQGILSQFLWRGSSQNRAIHKVSWVD 94
           L FAG  QLI SV+  + ++W     LP G +K ++ + S+FLW GS   R   KVSWVD
Sbjct: 658 LSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESLCSKFLWAGSIDGRKSSKVSWVD 717

Query: 93  CCLPMKEGGLGIRDPIEWNTAATHFQLWRL 4
           CCLP  EGGLG R   EWN       +W L
Sbjct: 718 CCLPKSEGGLGFRSFGEWNKTLLLRLIWVL 747


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
           thaliana]
          Length = 1072

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 42/90 (46%), Positives = 52/90 (57%)
 Frame = -2

Query: 273 LRFAGCLQLIKSVLSAMQSYWAIHLFLPIGILKTVQGILSQFLWRGSSQNRAIHKVSWVD 94
           L FAG  QLI SV+  + ++W     LP G +K ++ + S+FLW GS   R   KVSWVD
Sbjct: 658 LSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESLCSKFLWAGSIDGRKSSKVSWVD 717

Query: 93  CCLPMKEGGLGIRDPIEWNTAATHFQLWRL 4
           CCLP  EGGLG R   EWN       +W L
Sbjct: 718 CCLPKSEGGLGFRSFGEWNKTLLLRLIWVL 747


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 43/92 (46%), Positives = 54/92 (58%)
 Frame = -2

Query: 279 RFLRFAGCLQLIKSVLSAMQSYWAIHLFLPIGILKTVQGILSQFLWRGSSQNRAIHKVSW 100
           R L +AG +QLI SVL ++Q YWA    LP  ++K V+ I+  FLW GS       KV+W
Sbjct: 90  RTLSYAGRVQLINSVLFSIQVYWASLFLLPGQVIKNVEQIMKSFLWSGSDMRTTGAKVAW 149

Query: 99  VDCCLPMKEGGLGIRDPIEWNTAATHFQLWRL 4
              CLP KEGGLGI+   EWN  A    +W L
Sbjct: 150 DQVCLPKKEGGLGIKSIKEWNKIALLKHIWNL 181


>ref|XP_004173049.1| PREDICTED: putative ribonuclease H protein At1g65750-like, partial
           [Cucumis sativus]
          Length = 647

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 43/92 (46%), Positives = 54/92 (58%)
 Frame = -2

Query: 279 RFLRFAGCLQLIKSVLSAMQSYWAIHLFLPIGILKTVQGILSQFLWRGSSQNRAIHKVSW 100
           R L FA  LQL++ VL ++Q YWA    LP+ + K V  IL  +LWRG  + R   KV+W
Sbjct: 255 RVLSFASSLQLVRLVLRSLQVYWASVFMLPMKVHKDVDKILRSYLWRGKEEGRGGAKVAW 314

Query: 99  VDCCLPMKEGGLGIRDPIEWNTAATHFQLWRL 4
            + CLP  EGGL I D   WN A+T   LW L
Sbjct: 315 DEVCLPFDEGGLAICDGSSWNKASTLKILWLL 346


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