BLASTX nr result
ID: Bupleurum21_contig00016846
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00016846 (280 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232... 92 6e-17 dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana] 87 1e-15 dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ... 87 1e-15 ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2... 86 2e-15 ref|XP_004173049.1| PREDICTED: putative ribonuclease H protein A... 86 3e-15 >ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232446, partial [Cucumis sativus] Length = 382 Score = 91.7 bits (226), Expect = 6e-17 Identities = 45/92 (48%), Positives = 57/92 (61%) Frame = -2 Query: 279 RFLRFAGCLQLIKSVLSAMQSYWAIHLFLPIGILKTVQGILSQFLWRGSSQNRAIHKVSW 100 R L FAG LQL++SVL ++Q YWA LP+ + + V IL +LWRG + R KV+W Sbjct: 70 RVLSFAGRLQLVRSVLRSLQVYWASVFMLPMKVHRDVDKILRSYLWRGKEEGRGGAKVAW 129 Query: 99 VDCCLPMKEGGLGIRDPIEWNTAATHFQLWRL 4 + CLP EGGL IRD WN A+T LW L Sbjct: 130 DEVCLPFDEGGLAIRDGSSWNIASTLKILWLL 161 >dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana] Length = 1072 Score = 87.4 bits (215), Expect = 1e-15 Identities = 42/90 (46%), Positives = 52/90 (57%) Frame = -2 Query: 273 LRFAGCLQLIKSVLSAMQSYWAIHLFLPIGILKTVQGILSQFLWRGSSQNRAIHKVSWVD 94 L FAG QLI SV+ + ++W LP G +K ++ + S+FLW GS R KVSWVD Sbjct: 658 LSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESLCSKFLWAGSIDGRKSSKVSWVD 717 Query: 93 CCLPMKEGGLGIRDPIEWNTAATHFQLWRL 4 CCLP EGGLG R EWN +W L Sbjct: 718 CCLPKSEGGLGFRSFGEWNKTLLLRLIWVL 747 >dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis thaliana] Length = 1072 Score = 87.4 bits (215), Expect = 1e-15 Identities = 42/90 (46%), Positives = 52/90 (57%) Frame = -2 Query: 273 LRFAGCLQLIKSVLSAMQSYWAIHLFLPIGILKTVQGILSQFLWRGSSQNRAIHKVSWVD 94 L FAG QLI SV+ + ++W LP G +K ++ + S+FLW GS R KVSWVD Sbjct: 658 LSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESLCSKFLWAGSIDGRKSSKVSWVD 717 Query: 93 CCLPMKEGGLGIRDPIEWNTAATHFQLWRL 4 CCLP EGGLG R EWN +W L Sbjct: 718 CCLPKSEGGLGFRSFGEWNKTLLLRLIWVL 747 >ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1| predicted protein [Populus trichocarpa] Length = 517 Score = 86.3 bits (212), Expect = 2e-15 Identities = 43/92 (46%), Positives = 54/92 (58%) Frame = -2 Query: 279 RFLRFAGCLQLIKSVLSAMQSYWAIHLFLPIGILKTVQGILSQFLWRGSSQNRAIHKVSW 100 R L +AG +QLI SVL ++Q YWA LP ++K V+ I+ FLW GS KV+W Sbjct: 90 RTLSYAGRVQLINSVLFSIQVYWASLFLLPGQVIKNVEQIMKSFLWSGSDMRTTGAKVAW 149 Query: 99 VDCCLPMKEGGLGIRDPIEWNTAATHFQLWRL 4 CLP KEGGLGI+ EWN A +W L Sbjct: 150 DQVCLPKKEGGLGIKSIKEWNKIALLKHIWNL 181 >ref|XP_004173049.1| PREDICTED: putative ribonuclease H protein At1g65750-like, partial [Cucumis sativus] Length = 647 Score = 85.9 bits (211), Expect = 3e-15 Identities = 43/92 (46%), Positives = 54/92 (58%) Frame = -2 Query: 279 RFLRFAGCLQLIKSVLSAMQSYWAIHLFLPIGILKTVQGILSQFLWRGSSQNRAIHKVSW 100 R L FA LQL++ VL ++Q YWA LP+ + K V IL +LWRG + R KV+W Sbjct: 255 RVLSFASSLQLVRLVLRSLQVYWASVFMLPMKVHKDVDKILRSYLWRGKEEGRGGAKVAW 314 Query: 99 VDCCLPMKEGGLGIRDPIEWNTAATHFQLWRL 4 + CLP EGGL I D WN A+T LW L Sbjct: 315 DEVCLPFDEGGLAICDGSSWNKASTLKILWLL 346