BLASTX nr result

ID: Bupleurum21_contig00016772 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016772
         (1259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272046.2| PREDICTED: DDT domain-containing protein DDB...   417   e-114
emb|CBI21659.3| unnamed protein product [Vitis vinifera]              417   e-114
ref|XP_002513258.1| conserved hypothetical protein [Ricinus comm...   410   e-112
ref|XP_002325278.1| nucleosome/chromatin assembly factor group [...   390   e-106
ref|XP_004147319.1| PREDICTED: DDT domain-containing protein DDB...   385   e-104

>ref|XP_002272046.2| PREDICTED: DDT domain-containing protein DDB_G0282237 [Vitis
            vinifera]
          Length = 621

 Score =  417 bits (1071), Expect = e-114
 Identities = 215/418 (51%), Positives = 286/418 (68%), Gaps = 1/418 (0%)
 Frame = -3

Query: 1257 QQFPKELVAPVLQEVQFSMLTLKDLVSMIVEKLQECMLEGSELHGRKNNRIYPCKIMKIL 1078
            Q+FP EL+  VLQ VQFSML+LKDLV+ I  KLQ  +L G EL+G++++ +  C+I+K+L
Sbjct: 79   QKFPYELIPSVLQTVQFSMLSLKDLVNTITVKLQYHLLVGEELYGKRDDCVSLCQIIKVL 138

Query: 1077 VEDADKTQYQVAWLDNEKNVTGNAVVDGDDLIKKKLPFSRDVLKSFIRESTYRSVPWVLH 898
             E  +KT+Y+VAWLD +K   G AVV+ +DLI+KKLPF+R+VLKSFIRESTYR+VPWVLH
Sbjct: 139  EEGDNKTRYEVAWLDKDKKRIGTAVVNAEDLIRKKLPFTREVLKSFIRESTYRNVPWVLH 198

Query: 897  DELTRKHGISTDPPADIVPKMSVLNGCVMNKKRKRKSEDGFDNVERNKNTLGESNQEHHA 718
            D+  ++H ISTDPP +I  K    +G ++  K+KRK+ED   N+                
Sbjct: 199  DKWAQEHAISTDPPEEIRSKYFFKDGHLVINKKKRKTEDDKQNITEEP------------ 246

Query: 717  IDVEYPIDDLLVQPDADDPDFAQRPIPSRDFNIPMDSVGDLLLVWDFCSSFGRLLQLSPF 538
              + YPIDDLLV+P  DDP F  RP PSRDF +PMD VGDLL+VWDF SSFGRLL L PF
Sbjct: 247  --INYPIDDLLVRPGPDDPVFTDRPSPSRDFTVPMDCVGDLLMVWDFVSSFGRLLHLFPF 304

Query: 537  SLEDFENALCHKESNVVLIVEIHSAFLSLLIKDEGEYYLXXXXXXXXXXXTLMKWTEYLC 358
            SL+DFENA+CHK+SN+++IVE HSA L LL+KD+G+Y+            T++ WTEYLC
Sbjct: 305  SLQDFENAICHKDSNLIIIVETHSALLRLLVKDDGQYFTAIQEKKRKPKITIITWTEYLC 364

Query: 357  DFMEMVGVAEYSCYLSTIRRGHYGLLDISAKLGILREMVARVLATELYREKLDKYIXXXX 178
            DF+EMV + E S  + TI+RGHYGLL+  AKLGI RE++A+ LAT+L R+KLD+YI    
Sbjct: 365  DFLEMVEMPELSSCIPTIKRGHYGLLETHAKLGIFRELIAQTLATDLVRKKLDEYIEERQ 424

Query: 177  XXXXXXXXXXXXEGRKKREDKDH-KMLSNGAQVTKGHRVSSEGGNSSELVTNNENKQN 7
                        EGRKKRE+K+  K  S   Q   GH + +    S + + N++ K++
Sbjct: 425  TLAATKRGEAIEEGRKKREEKERLKAESAAVQEANGHGLEN-NNTSDDALGNSDGKKS 481


>emb|CBI21659.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  417 bits (1071), Expect = e-114
 Identities = 219/440 (49%), Positives = 294/440 (66%), Gaps = 23/440 (5%)
 Frame = -3

Query: 1257 QQFPKELVAPVLQEVQFSMLTLKDLVSMIVEKLQECMLEGSELHGRKNNRIYPCKIMKIL 1078
            Q+FP EL+  VLQ VQFSML+LKDLV+ I  KLQ  +L G EL+G++++ +  C+I+K+L
Sbjct: 79   QKFPYELIPSVLQTVQFSMLSLKDLVNTITVKLQYHLLVGEELYGKRDDCVSLCQIIKVL 138

Query: 1077 VEDADKTQYQVAWLDNEKNVTGNAVVDGDDLIKKKLPFSRDVLKSFIRESTYRSVPWVLH 898
             E  +KT+Y+VAWLD +K   G AVV+ +DLI+KKLPF+R+VLKSFIRESTYR+VPWVLH
Sbjct: 139  EEGDNKTRYEVAWLDKDKKRIGTAVVNAEDLIRKKLPFTREVLKSFIRESTYRNVPWVLH 198

Query: 897  DELTRKHGISTDPPADIVPKMSVLNGCVMNKKRKRKSEDGFDNVE--------RNKNTLG 742
            D+  ++H ISTDPP +I  K    +G ++  K+KRK+ED   N+         ++KN L 
Sbjct: 199  DKWAQEHAISTDPPEEIRSKYFFKDGHLVINKKKRKTEDDKQNITETRNGQVGKSKNKLE 258

Query: 741  ESNQEHHAID--------------VEYPIDDLLVQPDADDPDFAQRPIPSRDFNIPMDSV 604
                E   ++              + YPIDDLLV+P  DDP F  RP PSRDF +PMD V
Sbjct: 259  REKSEGLVMERSAEKEDFEPKEEPINYPIDDLLVRPGPDDPVFTDRPSPSRDFTVPMDCV 318

Query: 603  GDLLLVWDFCSSFGRLLQLSPFSLEDFENALCHKESNVVLIVEIHSAFLSLLIKDEGEYY 424
            GDLL+VWDF SSFGRLL L PFSL+DFENA+CHK+SN+++IVE HSA L LL+KD+G+Y+
Sbjct: 319  GDLLMVWDFVSSFGRLLHLFPFSLQDFENAICHKDSNLIIIVETHSALLRLLVKDDGQYF 378

Query: 423  LXXXXXXXXXXXTLMKWTEYLCDFMEMVGVAEYSCYLSTIRRGHYGLLDISAKLGILREM 244
                        T++ WTEYLCDF+EMV + E S  + TI+RGHYGLL+  AKLGI RE+
Sbjct: 379  TAIQEKKRKPKITIITWTEYLCDFLEMVEMPELSSCIPTIKRGHYGLLETHAKLGIFREL 438

Query: 243  VARVLATELYREKLDKYIXXXXXXXXXXXXXXXXEGRKKREDKDH-KMLSNGAQVTKGHR 67
            +A+ LAT+L R+KLD+YI                EGRKKRE+K+  K  S   Q   GH 
Sbjct: 439  IAQTLATDLVRKKLDEYIEERQTLAATKRGEAIEEGRKKREEKERLKAESAAVQEANGHG 498

Query: 66   VSSEGGNSSELVTNNENKQN 7
            + +    S + + N++ K++
Sbjct: 499  LEN-NNTSDDALGNSDGKKS 517


>ref|XP_002513258.1| conserved hypothetical protein [Ricinus communis]
            gi|223547632|gb|EEF49126.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 718

 Score =  410 bits (1055), Expect = e-112
 Identities = 211/425 (49%), Positives = 274/425 (64%), Gaps = 7/425 (1%)
 Frame = -3

Query: 1257 QQFPKELVAPVLQEVQFSMLTLKDLVSMIVEKLQECMLEGSELHGRKNNRIYPCKIMKIL 1078
            Q  PKELVAP L  +Q+SML+LKDL   I +KLQE +  G+ LHGRK + + PCK++KI+
Sbjct: 72   QDIPKELVAPALHIIQYSMLSLKDLADTIAKKLQEHLFVGAALHGRKGDDLCPCKVLKIM 131

Query: 1077 VEDADKTQYQVAWLDNEKNVTGNAVVDGDDLIKKKLPFSRDVLKSFIRESTYRSVPWVLH 898
             E   +T Y+VAWLD    +   +VV  +DL  KK PFSR +LKS IRESTYRSVPW LH
Sbjct: 132  -EGTAETAYEVAWLDKSNKIAETSVVIREDLTWKKFPFSRRILKSLIRESTYRSVPWALH 190

Query: 897  DELTRKHGISTDPPADIVPKMSVLNGCVMNKKRKRKSEDGFDNVERNKNTLGES------ 736
              L +KHGIS DPP +I  K+S+ +G V+  K++++  +      + K   GE       
Sbjct: 191  INLAQKHGISCDPPLEIEGKVSIKDGLVVCYKKRKEGVENESGKHKKKKVGGEEVEATDM 250

Query: 735  -NQEHHAIDVEYPIDDLLVQPDADDPDFAQRPIPSRDFNIPMDSVGDLLLVWDFCSSFGR 559
             N       ++YPIDDLLVQP  DDP F  RP PSRDF I MD VGDLL+VWDFCSSFGR
Sbjct: 251  ENGGKRGEPIKYPIDDLLVQPGEDDPVFTTRPSPSRDFCIQMDCVGDLLMVWDFCSSFGR 310

Query: 558  LLQLSPFSLEDFENALCHKESNVVLIVEIHSAFLSLLIKDEGEYYLXXXXXXXXXXXTLM 379
            +L LSPFSLEDFE A+CHK+SN++L+VE HSA L LL+K+ G+Y+L           T M
Sbjct: 311  MLHLSPFSLEDFEKAICHKDSNLMLLVETHSALLQLLMKNNGQYFLAVKKRNRKLKITFM 370

Query: 378  KWTEYLCDFMEMVGVAEYSCYLSTIRRGHYGLLDISAKLGILREMVARVLATELYREKLD 199
            KWTEYLCDF+EM+ +++ S + + IRRGHYGLLD+ AKLGILRE+V  VL T+L REKLD
Sbjct: 371  KWTEYLCDFVEMINISDLSAHATVIRRGHYGLLDVEAKLGILRELVNHVLETDLVREKLD 430

Query: 198  KYIXXXXXXXXXXXXXXXXEGRKKREDKDHKMLSNGAQVTKGHRVSSEGGNSSELVTNNE 19
            ++I                EGRK+RE+K+         +  G+ + S G N +       
Sbjct: 431  EHIEQRQLLGATRRGEALEEGRKRREEKEKLKAETVDTLMNGYSIESVGNNPNVSANGKH 490

Query: 18   NKQNG 4
             ++NG
Sbjct: 491  LRENG 495


>ref|XP_002325278.1| nucleosome/chromatin assembly factor group [Populus trichocarpa]
            gi|222862153|gb|EEE99659.1| nucleosome/chromatin assembly
            factor group [Populus trichocarpa]
          Length = 616

 Score =  390 bits (1002), Expect = e-106
 Identities = 206/404 (50%), Positives = 262/404 (64%), Gaps = 1/404 (0%)
 Frame = -3

Query: 1254 QFPKELVAPVLQEVQFSMLTLKDLVSMIVEKLQECMLEGSELHG-RKNNRIYPCKIMKIL 1078
            + PKEL+A  L  +QFSML+LKDL   I  KLQE +  G+ELHG R+ + + PCKI+K+L
Sbjct: 80   EIPKELMAMALHTIQFSMLSLKDLADKIAAKLQETLFIGAELHGKREKSDLCPCKILKVL 139

Query: 1077 VEDADKTQYQVAWLDNEKNVTGNAVVDGDDLIKKKLPFSRDVLKSFIRESTYRSVPWVLH 898
             E   KT+Y+VAWLD  K VT  A+V+ +DLI KK PFSR+ LK FIR+STYRS PWVLH
Sbjct: 140  EEGTVKTKYEVAWLDRNKKVTETAIVNRNDLIWKKSPFSRNSLKPFIRKSTYRSFPWVLH 199

Query: 897  DELTRKHGISTDPPADIVPKMSVLNGCVMNKKRKRKSEDGFDNVERNKNTLGESNQEHHA 718
            D+L  K+ IS DPP D+  K+ +L+G V NK++K  +E+                     
Sbjct: 200  DKLAEKYRISRDPPQDLKGKVFILDGIVYNKRKKDATEE--------------------- 238

Query: 717  IDVEYPIDDLLVQPDADDPDFAQRPIPSRDFNIPMDSVGDLLLVWDFCSSFGRLLQLSPF 538
              ++YPI+DLLVQP  DDP F  RP+PSRDF +PM+ VGDLL+VWDFCSSF +LL LSPF
Sbjct: 239  -PIKYPINDLLVQPGTDDPVFTARPLPSRDFKVPMNCVGDLLMVWDFCSSFCKLLHLSPF 297

Query: 537  SLEDFENALCHKESNVVLIVEIHSAFLSLLIKDEGEYYLXXXXXXXXXXXTLMKWTEYLC 358
            SLE+FENA+CHK SNV LIVE HS+ L LL  D+ EY+            TL  WTEYLC
Sbjct: 298  SLEEFENAICHKGSNVNLIVETHSSLLRLLKHDKDEYFSAVQKRIRSLKITLTNWTEYLC 357

Query: 357  DFMEMVGVAEYSCYLSTIRRGHYGLLDISAKLGILREMVARVLATELYREKLDKYIXXXX 178
            DF+E++ V ++S +++TI+RGHYGLLD   KLGILRE+V  VL T++ REKL +Y+    
Sbjct: 358  DFVEIINVGDFSTHITTIKRGHYGLLDAQVKLGILRELVNEVLETDIAREKLAEYVEERQ 417

Query: 177  XXXXXXXXXXXXEGRKKREDKDHKMLSNGAQVTKGHRVSSEGGN 46
                        EGRKKRE +  K  S    V  GH     G N
Sbjct: 418  VLLATKRGEALEEGRKKREKEQLKAKSVANAVMNGHGADIIGKN 461


>ref|XP_004147319.1| PREDICTED: DDT domain-containing protein DDB_G0282237-like [Cucumis
            sativus]
          Length = 615

 Score =  385 bits (988), Expect = e-104
 Identities = 207/421 (49%), Positives = 269/421 (63%), Gaps = 4/421 (0%)
 Frame = -3

Query: 1257 QQFPKELVAPVLQEVQFSMLTLKDLVSMIVEKLQECMLEGSELHGRKNNRIYPCKIMKIL 1078
            QQFPK+L+ P LQ +Q+SML+LKDL + +  KLQ+C+  G+EL+GRK+++IYPCKI K+L
Sbjct: 79   QQFPKDLIVPALQIIQYSMLSLKDLANTVAVKLQKCLFVGTELYGRKDDQIYPCKIFKVL 138

Query: 1077 VEDADKTQYQVAWLDNEKNVTGNAVVDGDDLIKKKLPFSRDVLKSFIRESTYRSVPWVLH 898
               AD+ QY+V WLD  K VT  ++++ +DL++KK P SR  LKSFIRESTYRS PWVLH
Sbjct: 139  ENGADEVQYEVVWLDKNKKVTETSLLNAEDLVQKKPPLSRRFLKSFIRESTYRSAPWVLH 198

Query: 897  DELTRKHGISTDPPADIVPKMSVLNG-CVMNKKRKRKSEDGFDNVERNKNTLGESNQEHH 721
            D+L + HGIST  P ++  K    +G  + NKKRK    D  D                 
Sbjct: 199  DKLAQNHGISTALPQELRSKAFFRDGLLICNKKRK----DLLDQ---------------- 238

Query: 720  AIDVEYPIDDLLVQPDADDPDFAQRPIPSRDFNIPMDSVGDLLLVWDFCSSFGRLLQLSP 541
              D++YPIDDLLVQP  DDP F +RP  SR+FN+PM+ VGDLL+VWDFCSSF RLL L P
Sbjct: 239  --DIKYPIDDLLVQPGPDDPVFLERPSASREFNVPMNCVGDLLMVWDFCSSFSRLLHLWP 296

Query: 540  FSLEDFENALCHKESNVVLIVEIHSAFLSLLIKDEGEYYLXXXXXXXXXXXTLMKWTEYL 361
            FSL+DFE A+ HKES   L+VE HSAF  LL+KDEGEY             TL+ WTEYL
Sbjct: 297  FSLDDFERAIYHKESTAPLLVEAHSAFFRLLLKDEGEYSSLVQGKKRKMKITLINWTEYL 356

Query: 360  CDFMEMVGVAEYSCYLSTIRRGHYGLLDISAKLGILREMVARVLATELYREKLDKYIXXX 181
            CDF+EM+G A+     +TI+RGHYGLL    KLGIL E+V   L + ++REKLD+ I   
Sbjct: 357  CDFLEMIGNAKLCANTATIKRGHYGLLATHVKLGILCELVNHSLESNIFREKLDEIIEQR 416

Query: 180  XXXXXXXXXXXXXEGRKKREDKDH---KMLSNGAQVTKGHRVSSEGGNSSELVTNNENKQ 10
                         EGRKKRE+K+    + +SNG     GH +  E    SE+   +  ++
Sbjct: 417  QALGATRRGEALEEGRKKREEKERLKSEPMSNGH--VNGHLMDKE---KSEIAKTDHGRR 471

Query: 9    N 7
            +
Sbjct: 472  S 472


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