BLASTX nr result

ID: Bupleurum21_contig00016761 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016761
         (909 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283852.1| PREDICTED: F-box-like/WD repeat-containing p...   169   2e-58
ref|XP_002306492.1| predicted protein [Populus trichocarpa] gi|2...   171   8e-58
ref|XP_002332225.1| predicted protein [Populus trichocarpa] gi|2...   171   7e-57
emb|CBI33743.3| unnamed protein product [Vitis vinifera]              169   2e-56
ref|XP_003550027.1| PREDICTED: F-box-like/WD repeat-containing p...   170   2e-56

>ref|XP_002283852.1| PREDICTED: F-box-like/WD repeat-containing protein TBL1X-like
           isoform 1 [Vitis vinifera]
          Length = 590

 Score =  169 bits (428), Expect(2) = 2e-58
 Identities = 83/128 (64%), Positives = 92/128 (71%)
 Frame = -2

Query: 386 VTTLDWNGEGTLLATGSYDGQARIWSRDGELVNTLSKHKGPIFSLKWNKXXXXXXXXXXX 207
           VTTLDWNG+GTLLATGSYDGQARIWS +GEL +TLSKHKGPIFSLKWN+           
Sbjct: 304 VTTLDWNGDGTLLATGSYDGQARIWSTNGELRSTLSKHKGPIFSLKWNR----------- 352

Query: 206 XXXXXXXXXXXXXXXXXXXXTAIVWDIKTGEWKQQFEFHSAPTLDVDWRNDVSFATCSTD 27
                               TAIVWD+KT EWKQQFEFH+ PTLDVDWRN+VSFAT STD
Sbjct: 353 --------KGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHAGPTLDVDWRNNVSFATSSTD 404

Query: 26  SMIYVCKV 3
           +MIYVCK+
Sbjct: 405 NMIYVCKI 412



 Score = 84.0 bits (206), Expect(2) = 2e-58
 Identities = 58/149 (38%), Positives = 68/149 (45%), Gaps = 4/149 (2%)
 Frame = -1

Query: 891 DNMKLEHEENGAR--PEPMDIETVDISLKSSAIPCIIPDSDVTILEGHVSEVFVCAWSXX 718
           D + ++H+ENG    PEPMDI T      S+   C IP SDVTILEGH SEV  CAWS  
Sbjct: 199 DVVTVKHDENGVSGGPEPMDIST-----SSTFQACEIPSSDVTILEGHTSEVCACAWS-- 251

Query: 717 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIWTIGEGHSSSNMQ 538
                                                         IWTI +G   S++Q
Sbjct: 252 ------------------------------PAGSLLASGSGDSTARIWTIADGTCRSSVQ 281

Query: 537 AVPYNSAVLKHSRGRT--QSKDVTTLDWN 457
             P N  VLKH +GRT  +SKDVTTLDWN
Sbjct: 282 NGPSNVLVLKHVKGRTNEKSKDVTTLDWN 310


>ref|XP_002306492.1| predicted protein [Populus trichocarpa] gi|222855941|gb|EEE93488.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score =  171 bits (432), Expect(2) = 8e-58
 Identities = 85/128 (66%), Positives = 90/128 (70%)
 Frame = -2

Query: 386 VTTLDWNGEGTLLATGSYDGQARIWSRDGELVNTLSKHKGPIFSLKWNKXXXXXXXXXXX 207
           VTTLDWNGEGTLLATGSYDGQARIWS DGEL  TLSKHKGPIF+LKWNK           
Sbjct: 231 VTTLDWNGEGTLLATGSYDGQARIWSTDGELKTTLSKHKGPIFTLKWNK----------- 279

Query: 206 XXXXXXXXXXXXXXXXXXXXTAIVWDIKTGEWKQQFEFHSAPTLDVDWRNDVSFATCSTD 27
                               TAIVWD++  EWKQQFEFHS PTLDVDWRN+VSFAT STD
Sbjct: 280 --------KGDYLLTGSCDKTAIVWDVRAEEWKQQFEFHSGPTLDVDWRNNVSFATSSTD 331

Query: 26  SMIYVCKV 3
           +MIYVCKV
Sbjct: 332 NMIYVCKV 339



 Score = 80.1 bits (196), Expect(2) = 8e-58
 Identities = 58/153 (37%), Positives = 64/153 (41%), Gaps = 2/153 (1%)
 Frame = -1

Query: 909 DARNDGDNMKLEHEENGARPEPMDIETVDISLKSSAIPCIIPDSDVTILEGHVSEVFVCA 730
           D   D D       E    PEPMDI     S+ S++  C IP SDV ILEGH SEV  CA
Sbjct: 122 DKDKDKDKEFEREHERELGPEPMDI-----SITSTSQTCEIPSSDVMILEGHTSEVCACA 176

Query: 729 WSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIWTIGEGHSS 550
           WS                                                IWTI EG S 
Sbjct: 177 WSPIGQLLASGSGDSTAR--------------------------------IWTITEGTSR 204

Query: 549 SNMQAVPYNSAVLKHSRGRT--QSKDVTTLDWN 457
           S +Q  P N  VLKH +GRT  +SKDVTTLDWN
Sbjct: 205 SGVQNDPLNVLVLKHVKGRTNEKSKDVTTLDWN 237


>ref|XP_002332225.1| predicted protein [Populus trichocarpa] gi|222831838|gb|EEE70315.1|
           predicted protein [Populus trichocarpa]
          Length = 532

 Score =  171 bits (432), Expect(2) = 7e-57
 Identities = 85/128 (66%), Positives = 90/128 (70%)
 Frame = -2

Query: 386 VTTLDWNGEGTLLATGSYDGQARIWSRDGELVNTLSKHKGPIFSLKWNKXXXXXXXXXXX 207
           VTTLDWNGEGTLLATGSYDGQARIWS DGEL  TLSKHKGPIF+LKWNK           
Sbjct: 246 VTTLDWNGEGTLLATGSYDGQARIWSTDGELKTTLSKHKGPIFTLKWNK----------- 294

Query: 206 XXXXXXXXXXXXXXXXXXXXTAIVWDIKTGEWKQQFEFHSAPTLDVDWRNDVSFATCSTD 27
                               TAIVWD++  EWKQQFEFHS PTLDVDWRN+VSFAT STD
Sbjct: 295 --------KGDYLLTGSCDKTAIVWDVRAEEWKQQFEFHSGPTLDVDWRNNVSFATSSTD 346

Query: 26  SMIYVCKV 3
           +MIYVCKV
Sbjct: 347 NMIYVCKV 354



 Score = 77.0 bits (188), Expect(2) = 7e-57
 Identities = 54/134 (40%), Positives = 58/134 (43%), Gaps = 2/134 (1%)
 Frame = -1

Query: 852 PEPMDIETVDISLKSSAIPCIIPDSDVTILEGHVSEVFVCAWSXXXXXXXXXXXXXXXXX 673
           PEPMDI T      S++  C IP SDV ILEGH SEV  CAWS                 
Sbjct: 156 PEPMDISTA-----STSQTCEIPSSDVMILEGHTSEVCACAWSPTGSLLASGSGDSTAR- 209

Query: 672 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIWTIGEGHSSSNMQAVPYNSAVLKHSRGR 493
                                          IWTI EG S S  Q  P N  VLKH +GR
Sbjct: 210 -------------------------------IWTIAEGTSRSVAQNGPLNVLVLKHVKGR 238

Query: 492 T--QSKDVTTLDWN 457
           T  +SKDVTTLDWN
Sbjct: 239 TNEKSKDVTTLDWN 252


>emb|CBI33743.3| unnamed protein product [Vitis vinifera]
          Length = 725

 Score =  169 bits (428), Expect(2) = 2e-56
 Identities = 83/128 (64%), Positives = 92/128 (71%)
 Frame = -2

Query: 386 VTTLDWNGEGTLLATGSYDGQARIWSRDGELVNTLSKHKGPIFSLKWNKXXXXXXXXXXX 207
           VTTLDWNG+GTLLATGSYDGQARIWS +GEL +TLSKHKGPIFSLKWN+           
Sbjct: 439 VTTLDWNGDGTLLATGSYDGQARIWSTNGELRSTLSKHKGPIFSLKWNR----------- 487

Query: 206 XXXXXXXXXXXXXXXXXXXXTAIVWDIKTGEWKQQFEFHSAPTLDVDWRNDVSFATCSTD 27
                               TAIVWD+KT EWKQQFEFH+ PTLDVDWRN+VSFAT STD
Sbjct: 488 --------KGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHAGPTLDVDWRNNVSFATSSTD 539

Query: 26  SMIYVCKV 3
           +MIYVCK+
Sbjct: 540 NMIYVCKI 547



 Score = 77.0 bits (188), Expect(2) = 2e-56
 Identities = 53/134 (39%), Positives = 59/134 (44%), Gaps = 2/134 (1%)
 Frame = -1

Query: 852 PEPMDIETVDISLKSSAIPCIIPDSDVTILEGHVSEVFVCAWSXXXXXXXXXXXXXXXXX 673
           PEPMDI T      S+   C IP SDVTILEGH SEV  CAWS                 
Sbjct: 349 PEPMDIST-----SSTFQACEIPSSDVTILEGHTSEVCACAWSPAGSLLASGSGDSTAR- 402

Query: 672 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIWTIGEGHSSSNMQAVPYNSAVLKHSRGR 493
                                          IWTI +G   S++Q  P N  VLKH +GR
Sbjct: 403 -------------------------------IWTIADGTCRSSVQNGPSNVLVLKHVKGR 431

Query: 492 T--QSKDVTTLDWN 457
           T  +SKDVTTLDWN
Sbjct: 432 TNEKSKDVTTLDWN 445


>ref|XP_003550027.1| PREDICTED: F-box-like/WD repeat-containing protein TBL1XR1-like
           [Glycine max]
          Length = 614

 Score =  170 bits (430), Expect(2) = 2e-56
 Identities = 84/128 (65%), Positives = 91/128 (71%)
 Frame = -2

Query: 386 VTTLDWNGEGTLLATGSYDGQARIWSRDGELVNTLSKHKGPIFSLKWNKXXXXXXXXXXX 207
           VTTLDWNGEGTLLATGSYDGQARIW+ +GEL +TLSKHKGPIFSLKWNK           
Sbjct: 328 VTTLDWNGEGTLLATGSYDGQARIWTTNGELKSTLSKHKGPIFSLKWNK----------- 376

Query: 206 XXXXXXXXXXXXXXXXXXXXTAIVWDIKTGEWKQQFEFHSAPTLDVDWRNDVSFATCSTD 27
                               TAIVWD+K  EWKQQFEFHS PTLDVDWRN+VSFAT STD
Sbjct: 377 --------KGDYLLTGSCDQTAIVWDVKAEEWKQQFEFHSGPTLDVDWRNNVSFATSSTD 428

Query: 26  SMIYVCKV 3
           +MIYVCK+
Sbjct: 429 NMIYVCKI 436



 Score = 76.3 bits (186), Expect(2) = 2e-56
 Identities = 55/140 (39%), Positives = 61/140 (43%), Gaps = 2/140 (1%)
 Frame = -1

Query: 870 EENGARPEPMDIETVDISLKSSAIPCIIPDSDVTILEGHVSEVFVCAWSXXXXXXXXXXX 691
           EENGA   P   E++DIS  S++    IP SDVTILEGH SEV  CAWS           
Sbjct: 230 EENGAVGGP---ESMDISTTSTSQLFEIPSSDVTILEGHTSEVCACAWSPTGSLLASGSG 286

Query: 690 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIWTIGEGHSSSNMQAVPYNSAVL 511
                                                IWTI EG      Q  P N  VL
Sbjct: 287 DSTAR--------------------------------IWTIAEGRCKPGSQNSPLNVLVL 314

Query: 510 KHSRGRT--QSKDVTTLDWN 457
           KH RG+T  +SKDVTTLDWN
Sbjct: 315 KHVRGKTNEKSKDVTTLDWN 334


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