BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016661
         (586 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004168675.1| PREDICTED: pentatricopeptide repeat-containi...   202   3e-50
ref|XP_004152769.1| PREDICTED: pentatricopeptide repeat-containi...   202   3e-50
ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containi...   195   4e-48
ref|XP_003544296.1| PREDICTED: pentatricopeptide repeat-containi...   185   4e-45
ref|XP_002893064.1| hypothetical protein ARALYDRAFT_472198 [Arab...   179   4e-43

>ref|XP_004168675.1| PREDICTED: pentatricopeptide repeat-containing protein
            At1g19720-like, partial [Cucumis sativus]
          Length = 1090

 Score =  202 bits (515), Expect = 3e-50
 Identities = 97/191 (50%), Positives = 136/191 (71%)
 Frame = -3

Query: 575  TKDIISWNTMMAGSLLHGYSTAALDLFEQMRGYGLEPNRGTFISIISAYGLAKMVDEGEH 396
            +KDII+WN+++AG +LHG S +A  LF+QMR  G+ PNRGT  SII AYG+A MVD+G H
Sbjct: 586  SKDIITWNSIIAGYILHGCSDSAFQLFDQMRNLGIRPNRGTLASIIHAYGIAGMVDKGRH 645

Query: 395  TLSSMIKDFNILPSLDHCKAMINLYGRSGKLKEAVKFIEDMVVQPDLSIWNTLLTACRNK 216
              SS+ ++  ILP+LDH  AM++LYGRSG+L +A++FIEDM ++PD+SIW +LLTACR  
Sbjct: 646  VFSSITEEHQILPTLDHYLAMVDLYGRSGRLADAIEFIEDMPIEPDVSIWTSLLTACRFH 705

Query: 215  GNARIARHAVERLLKLDPGNALMQRLVLQVFGLCGINDKYPKITKTQMSDKAKKSIGESW 36
            GN  +A  A +RL +L+P N ++ RL++Q + L G  ++  K+ K       KK   + W
Sbjct: 706  GNLNLAVLAAKRLHELEPDNHVIYRLLVQAYALYGKFEQTLKVRKLGKESAMKKCTAQCW 765

Query: 35   VEIRNTVHHFV 3
            VE+RN VH FV
Sbjct: 766  VEVRNKVHLFV 776


>ref|XP_004152769.1| PREDICTED: pentatricopeptide repeat-containing protein At1g19720-like
            [Cucumis sativus]
          Length = 1463

 Score =  202 bits (515), Expect = 3e-50
 Identities = 97/191 (50%), Positives = 136/191 (71%)
 Frame = -3

Query: 575  TKDIISWNTMMAGSLLHGYSTAALDLFEQMRGYGLEPNRGTFISIISAYGLAKMVDEGEH 396
            +KDII+WN+++AG +LHG S +A  LF+QMR  G+ PNRGT  SII AYG+A MVD+G H
Sbjct: 586  SKDIITWNSIIAGYILHGCSDSAFQLFDQMRNLGIRPNRGTLASIIHAYGIAGMVDKGRH 645

Query: 395  TLSSMIKDFNILPSLDHCKAMINLYGRSGKLKEAVKFIEDMVVQPDLSIWNTLLTACRNK 216
              SS+ ++  ILP+LDH  AM++LYGRSG+L +A++FIEDM ++PD+SIW +LLTACR  
Sbjct: 646  VFSSITEEHQILPTLDHYLAMVDLYGRSGRLADAIEFIEDMPIEPDVSIWTSLLTACRFH 705

Query: 215  GNARIARHAVERLLKLDPGNALMQRLVLQVFGLCGINDKYPKITKTQMSDKAKKSIGESW 36
            GN  +A  A +RL +L+P N ++ RL++Q + L G  ++  K+ K       KK   + W
Sbjct: 706  GNLNLAVLAAKRLHELEPDNHVIYRLLVQAYALYGKFEQTLKVRKLGKESAMKKCTAQCW 765

Query: 35   VEIRNTVHHFV 3
            VE+RN VH FV
Sbjct: 766  VEVRNKVHLFV 776


>ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containing protein At1g19720-like
            [Vitis vinifera]
          Length = 1545

 Score =  195 bits (496), Expect = 4e-48
 Identities = 96/193 (49%), Positives = 138/193 (71%)
 Frame = -3

Query: 581  IPTKDIISWNTMMAGSLLHGYSTAALDLFEQMRGYGLEPNRGTFISIISAYGLAKMVDEG 402
            I +KDIISWN+++AG +LHG S +ALDLF+QM   G++P+RGTF+SII A+ L+ MVD+G
Sbjct: 589  ISSKDIISWNSLIAGYVLHGCSDSALDLFDQMTKMGVKPSRGTFLSIIYAFSLSGMVDKG 648

Query: 401  EHTLSSMIKDFNILPSLDHCKAMINLYGRSGKLKEAVKFIEDMVVQPDLSIWNTLLTACR 222
            +   SSM++D+ ILP L+H  AMI+L GRSGKL EA++FIEDM ++PD  IW  LLTA +
Sbjct: 649  KQVFSSMMEDYQILPGLEHHSAMIDLLGRSGKLGEAIEFIEDMAIEPDSCIWAALLTASK 708

Query: 221  NKGNARIARHAVERLLKLDPGNALMQRLVLQVFGLCGINDKYPKITKTQMSDKAKKSIGE 42
              GN  +A  A E LL+L+P N  + + +LQ++ L G  +   K+ K++   + K+ +G 
Sbjct: 709  IHGNIGLAIRAGECLLELEPSNFSIHQQILQMYALSGKFEDVSKLRKSEKRSETKQPLGC 768

Query: 41   SWVEIRNTVHHFV 3
            SW+E +N VH FV
Sbjct: 769  SWIEAKNIVHTFV 781



 Score = 61.6 bits (148), Expect = 9e-08
 Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 5/174 (2%)
 Frame = -3

Query: 572 KDIISWNTMMAGSLLHGYSTAALDLFEQMRGYGLEPNRGTFISIISAYG---LAKMVDEG 402
           +D  SWN+++AG L +G+   AL +F QM+ + + PN  T +SI+ A      AK V E 
Sbjct: 491 RDTASWNSLIAGYLQNGHKNKALGIFRQMQSFCIRPNSVTMLSILPACANLVAAKKVKE- 549

Query: 401 EHTLSSMIKDFNILPSLDHCKAMINLYGRSGKLKEAVKFIEDMVVQPDLSIWNTLLTACR 222
              +   I   N+   L     +I+ Y +SG +  A    +  +   D+  WN+L+    
Sbjct: 550 ---IHGCILRRNLGSELSVANCLIDTYAKSGNIVYAQTIFQG-ISSKDIISWNSLIAGYV 605

Query: 221 NKGNARIARHAVERLLKL--DPGNALMQRLVLQVFGLCGINDKYPKITKTQMSD 66
             G +  A    +++ K+   P        ++  F L G+ DK  ++  + M D
Sbjct: 606 LHGCSDSALDLFDQMTKMGVKPSRGTFLS-IIYAFSLSGMVDKGKQVFSSMMED 658



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 34/112 (30%), Positives = 65/112 (58%)
 Frame = -3

Query: 569 DIISWNTMMAGSLLHGYSTAALDLFEQMRGYGLEPNRGTFISIISAYGLAKMVDEGEHTL 390
           D+ +W +M++G   +   + AL+LF +M   G+EPN  T  S ISA    K + +G    
Sbjct: 320 DVFTWTSMISGFAQNNRRSQALELFREMLLAGIEPNGVTVTSGISACASLKALKKGMELH 379

Query: 389 SSMIKDFNILPSLDHCKAMINLYGRSGKLKEAVKFIEDMVVQPDLSIWNTLL 234
           S  +K    +  L    ++I++Y +SG+L++A + + DM+++ D+  WN+++
Sbjct: 380 SVAVK-IGCVEDLLVGNSLIDMYSKSGELEDA-RRVFDMILKKDVYTWNSMI 429


>ref|XP_003544296.1| PREDICTED: pentatricopeptide repeat-containing protein At1g19720-like
            [Glycine max]
          Length = 945

 Score =  185 bits (470), Expect = 4e-45
 Identities = 92/190 (48%), Positives = 132/190 (69%)
 Frame = -3

Query: 572  KDIISWNTMMAGSLLHGYSTAALDLFEQMRGYGLEPNRGTFISIISAYGLAKMVDEGEHT 393
            KDIISWN++++G +LHG S +ALDLF+QMR  GL P+R T  SIISAY  A+MVDEG+H 
Sbjct: 591  KDIISWNSLLSGYVLHGCSESALDLFDQMRKDGLHPSRVTLTSIISAYSHAEMVDEGKHA 650

Query: 392  LSSMIKDFNILPSLDHCKAMINLYGRSGKLKEAVKFIEDMVVQPDLSIWNTLLTACRNKG 213
             S++ +++ I   L+H  AM+ L GRSGKL +A++FI++M V+P+ S+W  LLTACR   
Sbjct: 651  FSNISEEYQIRLDLEHYSAMVYLLGRSGKLAKALEFIQNMPVEPNSSVWAALLTACRIHK 710

Query: 212  NARIARHAVERLLKLDPGNALMQRLVLQVFGLCGINDKYPKITKTQMSDKAKKSIGESWV 33
            N  +A  A E +L+LDP N + Q L+ Q + +CG + +  K+TK +     K  +G+SW+
Sbjct: 711  NFGMAIFAGEHMLELDPENIITQHLLSQAYSVCGKSWEAQKMTKLEKEKFVKMPVGQSWI 770

Query: 32   EIRNTVHHFV 3
            E+ N VH FV
Sbjct: 771  EMNNMVHTFV 780



 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 1/160 (0%)
 Frame = -3

Query: 575 TKDIISWNTMMAGSLLHGYSTAALDLFEQMRGYGLEPNRGTFISIISAYGLAKMVDEGEH 396
           T D+ +W +M++G    G    A DL   M   G+EPN  T  S  SA    K +  G  
Sbjct: 317 TPDVYTWTSMISGFTQKGRINEAFDLLRDMLIVGVEPNSITIASAASACASVKSLSMGSE 376

Query: 395 TLSSMIKDFNILPSLDHCKAMINLYGRSGKLKEAVKFIEDMVVQPDLSIWNTLLTACRNK 216
             S  +K  +++  +    ++I++Y + G L EA + I D++++ D+  WN+++      
Sbjct: 377 IHSIAVKT-SMVDDILIGNSLIDMYAKGGDL-EAAQSIFDVMLERDVYSWNSIIGGYCQA 434

Query: 215 GNARIARHAVERLLKLD-PGNALMQRLVLQVFGLCGINDK 99
           G    A     ++ + D P N +   +++  F   G  D+
Sbjct: 435 GFCGKAHELFMKMQESDSPPNVVTWNVMITGFMQNGDEDE 474


>ref|XP_002893064.1| hypothetical protein ARALYDRAFT_472198 [Arabidopsis lyrata subsp.
            lyrata] gi|297338906|gb|EFH69323.1| hypothetical protein
            ARALYDRAFT_472198 [Arabidopsis lyrata subsp. lyrata]
          Length = 1490

 Score =  179 bits (453), Expect = 4e-43
 Identities = 83/190 (43%), Positives = 128/190 (67%)
 Frame = -3

Query: 575  TKDIISWNTMMAGSLLHGYSTAALDLFEQMRGYGLEPNRGTFISIISAYGLAKMVDEGEH 396
            TKDII+WN+++ G +LHG    AL+LF QM+  G++PNRGT  SII A+GL   VDEG+ 
Sbjct: 587  TKDIITWNSLIGGYVLHGSYGPALELFNQMKTQGIKPNRGTLSSIILAHGLMGNVDEGKK 646

Query: 395  TLSSMIKDFNILPSLDHCKAMINLYGRSGKLKEAVKFIEDMVVQPDLSIWNTLLTACRNK 216
               S+  D++I+P+L+HC AM++LYGRS +L+EA++FI++M +Q +  IW + LT CR  
Sbjct: 647  VFYSIANDYHIIPALEHCSAMVSLYGRSNRLEEALQFIQEMNIQSETPIWESFLTGCRIH 706

Query: 215  GNARIARHAVERLLKLDPGNALMQRLVLQVFGLCGINDKYPKITKTQMSDKAKKSIGESW 36
            G+  +A HA E L  L+P N + + +V Q++ L     +  +  K +  +  KK +G+SW
Sbjct: 707  GDIDMAIHAAENLFSLEPENTVTENIVSQIYALGAKLGRSLEGKKPRRDNLLKKPLGQSW 766

Query: 35   VEIRNTVHHF 6
            +E+RN +H F
Sbjct: 767  IEVRNLIHTF 776



 Score = 62.8 bits (151), Expect = 4e-08
 Identities = 34/115 (29%), Positives = 64/115 (55%)
 Frame = -3

Query: 575 TKDIISWNTMMAGSLLHGYSTAALDLFEQMRGYGLEPNRGTFISIISAYGLAKMVDEGEH 396
           T D+ +W  M++G + +G    ALD+F +M   G+ PN  T +S +SA    K+++ G  
Sbjct: 314 TADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSYLKVINLGSE 373

Query: 395 TLSSMIKDFNILPSLDHCKAMINLYGRSGKLKEAVKFIEDMVVQPDLSIWNTLLT 231
             S  +K    +  +    +++++Y + GKL++A K + D V   D+  WN+++T
Sbjct: 374 VHSIAVK-MGFIDDVLVGNSLVDMYSKCGKLEDARK-VFDSVKNKDVYTWNSMIT 426