BLASTX nr result

ID: Bupleurum21_contig00016562 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016562
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517749.1| conserved hypothetical protein [Ricinus comm...    88   6e-16
ref|XP_003537327.1| PREDICTED: uncharacterized protein LOC100793...    85   7e-15
ref|XP_003519276.1| PREDICTED: uncharacterized protein LOC100808...    84   2e-14
ref|XP_002319404.1| predicted protein [Populus trichocarpa] gi|2...    83   2e-14
ref|XP_003552926.1| PREDICTED: uncharacterized protein LOC100800...    82   4e-14

>ref|XP_002517749.1| conserved hypothetical protein [Ricinus communis]
           gi|223543147|gb|EEF44681.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 521

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 51/102 (50%), Positives = 60/102 (58%)
 Frame = -2

Query: 422 STAIISLSTGAISSIAVSTTTELFGAKWXXXXXXXXXXXXXXXXXXXGDLAAVLYQHNNG 243
           STAII + TGAI+SI+VSTTTELFG K                    G LAAV+Y H  G
Sbjct: 418 STAIIGVCTGAITSISVSTTTELFGTKNFSINHNVVVANIPIGSFIFGSLAAVIY-HREG 476

Query: 242 RGGVERCIGMKCYQTSFITWGSLCCVGTLLALTLHSRTNKSC 117
             G  +CIG++CY  +FI WGSLC +G  LAL LH R  K C
Sbjct: 477 -DGEGKCIGLRCYTNTFIIWGSLCFLGAFLALILHVRIRKFC 517


>ref|XP_003537327.1| PREDICTED: uncharacterized protein LOC100793370 [Glycine max]
          Length = 512

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 47/100 (47%), Positives = 59/100 (59%)
 Frame = -2

Query: 422 STAIISLSTGAISSIAVSTTTELFGAKWXXXXXXXXXXXXXXXXXXXGDLAAVLYQHNNG 243
           STA+I + TGAI+SIAVSTTTELFG K                    G  AA++Y     
Sbjct: 409 STAVIGVCTGAITSIAVSTTTELFGTKNFSVNHNVVVANIPIGSFIFGYSAALIYHKEGN 468

Query: 242 RGGVERCIGMKCYQTSFITWGSLCCVGTLLALTLHSRTNK 123
             G  +C+GM+CY+ +FI WG  C +GTLLAL LH+RT K
Sbjct: 469 EHG--KCMGMECYRNTFIMWGFFCFLGTLLALILHARTRK 506


>ref|XP_003519276.1| PREDICTED: uncharacterized protein LOC100808034 [Glycine max]
          Length = 525

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 48/99 (48%), Positives = 57/99 (57%)
 Frame = -2

Query: 419 TAIISLSTGAISSIAVSTTTELFGAKWXXXXXXXXXXXXXXXXXXXGDLAAVLYQHNNGR 240
           TAII + TGAI+SI+VSTTTELFG K                    G LAA +Y H  G 
Sbjct: 422 TAIIGVCTGAITSISVSTTTELFGTKNFSVNHNVVVANIPVGSFLFGYLAAFVY-HKGGH 480

Query: 239 GGVERCIGMKCYQTSFITWGSLCCVGTLLALTLHSRTNK 123
               +C+GM+CY+ +FI WGSLC  GT LA  LH RT K
Sbjct: 481 HEHGKCMGMECYRDTFIIWGSLCFFGTFLAFVLHVRTRK 519


>ref|XP_002319404.1| predicted protein [Populus trichocarpa] gi|222857780|gb|EEE95327.1|
           predicted protein [Populus trichocarpa]
          Length = 511

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 46/100 (46%), Positives = 59/100 (59%)
 Frame = -2

Query: 422 STAIISLSTGAISSIAVSTTTELFGAKWXXXXXXXXXXXXXXXXXXXGDLAAVLYQHNNG 243
           STAII + TGAI+SI+VSTTTELFG K                    G  AA+LY     
Sbjct: 409 STAIIGVCTGAITSISVSTTTELFGTKNFSINHNVVVANIPIGSFLFGYSAALLYHREGN 468

Query: 242 RGGVERCIGMKCYQTSFITWGSLCCVGTLLALTLHSRTNK 123
             G  +C+GM+CY+++F+ WGSLC  G+ LAL LH+R  K
Sbjct: 469 EDG--KCMGMECYRSTFMIWGSLCLFGSFLALVLHARLRK 506


>ref|XP_003552926.1| PREDICTED: uncharacterized protein LOC100800763 [Glycine max]
          Length = 510

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 46/101 (45%), Positives = 59/101 (58%), Gaps = 1/101 (0%)
 Frame = -2

Query: 422 STAIISLSTGAISSIAVSTTTELFGAKWXXXXXXXXXXXXXXXXXXXGDLAAVLYQHNNG 243
           STA+I + TGAI+SIAVSTTTELFG                      G  AA++Y+    
Sbjct: 404 STAVIGVCTGAITSIAVSTTTELFGTNHFSVNHNVVVANIPIGSLIFGYSAALIYRKEGH 463

Query: 242 RGGVE-RCIGMKCYQTSFITWGSLCCVGTLLALTLHSRTNK 123
                 +C+GM+CY+ +FI WGS C +GTLLAL LH+RT K
Sbjct: 464 EHDEHVKCMGMECYRNTFIMWGSFCFLGTLLALILHARTRK 504


Top