BLASTX nr result

ID: Bupleurum21_contig00016548 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016548
         (982 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528188.1| ran-binding protein, putative [Ricinus commu...   127   5e-27
emb|CAN59845.1| hypothetical protein VITISV_004512 [Vitis vinifera]   122   1e-25
ref|XP_003632864.1| PREDICTED: uncharacterized protein LOC100265...   109   9e-22
ref|XP_002299634.1| predicted protein [Populus trichocarpa] gi|2...   107   6e-21
ref|XP_002304181.1| predicted protein [Populus trichocarpa] gi|2...   106   1e-20

>ref|XP_002528188.1| ran-binding protein, putative [Ricinus communis]
           gi|223532400|gb|EEF34195.1| ran-binding protein,
           putative [Ricinus communis]
          Length = 445

 Score =  127 bits (318), Expect = 5e-27
 Identities = 104/285 (36%), Positives = 132/285 (46%), Gaps = 8/285 (2%)
 Frame = +2

Query: 137 MGDAEDTLAPSKKRTAVRQITKENPGLXXXXXXXXXXXXXFKKASDDVLASRRIVKVRRQ 316
           MGDAE+TL  SKKR A R+I+++NPGL             FK+ASD+VLA RRIVKVRR 
Sbjct: 1   MGDAENTLPSSKKRAAGREISRDNPGLDDEEDTLEQETGTFKRASDEVLAGRRIVKVRRS 60

Query: 317 QPSATPSAASNPFAGIRXXXXXXXXXXXXXXXXXXESVNLVSDDIREKNGVNMETEKGKD 496
           Q S+TPS  SNPFAGIR                   + N  + + R KN    +TE+GKD
Sbjct: 61  QTSSTPS--SNPFAGIRLVPPPEPTTVLAAAATEAVTSNEKASEDR-KNDAVKDTEEGKD 117

Query: 497 YSDKKSECKVEEEGTESILEDERTETAGKVEDDKKLQSFAEPDTESMVSQGK----DNTI 664
            + K+ E K EE+  E++        A ++ +DK+     +  TES V        D T 
Sbjct: 118 ETGKQLESKSEEQVAETV--------AKEIAEDKENNGVVDEGTESKVDNENPAEDDKTE 169

Query: 665 GVTT----NLEQADVKIDELNETKNEAETHTDXXXXXXXXXXXGGSVDVQKNEVTPFGSF 832
             T      +E      DE  ET+NE     D             +VD    E  P  SF
Sbjct: 170 NETAEGGEKIENEKAAGDE--ETENEKAVEGDKTETEEKKDNGSENVD-PSAESKPLSSF 226

Query: 833 QQLSSSQNXXXXXXXXXXXXXXXXXXPISKDGSTIDSGFSKSTLF 967
           QQLSSSQN                   +SKDGS   SG S  +LF
Sbjct: 227 QQLSSSQNAFTGLAGTGFSTASFTFGSVSKDGS---SGTSTGSLF 268


>emb|CAN59845.1| hypothetical protein VITISV_004512 [Vitis vinifera]
          Length = 449

 Score =  122 bits (307), Expect = 1e-25
 Identities = 104/287 (36%), Positives = 135/287 (47%), Gaps = 6/287 (2%)
 Frame = +2

Query: 137 MGDAEDTLAPSKKRTAVRQITKENPGLXXXXXXXXXXXXXFKKASDDVLASRRIVKVRRQ 316
           MGDAE+ + PSKKR A R+++++NPGL             FKKAS +V+A+RRIVKVRRQ
Sbjct: 1   MGDAENAVPPSKKRAAGRELSRDNPGLDDEESPEQEGET-FKKASHEVMANRRIVKVRRQ 59

Query: 317 QPSATPSAASNPFAGIRXXXXXXXXXXXXXXXXXXE--SVNLVSDDIREKNGVNMETEKG 490
           Q ++TPS  SNPFAGIR                  +  S   VS D  EK+  +  TE  
Sbjct: 60  QTASTPS--SNPFAGIRLVPPTEPISAPAEVSTEAQAASEKTVSRDKDEKDDESKGTEND 117

Query: 491 KDYSDKKSECKVEE-EGTESILEDERTETAGKVEDDKKLQSFAEPD---TESMVSQGKDN 658
           KD   K +E + +E  GT++  +DE   T  K +D+   Q  +E D    ES   + K +
Sbjct: 118 KDDESKGTEKENDESRGTKNEKDDESKGTE-KEKDENVKQPESETDESVAESAADKEKSD 176

Query: 659 TIGVTTNLEQADVKIDELNETKNEAETHTDXXXXXXXXXXXGGSVDVQKNEVTPFGSFQQ 838
            I   +  E  D K  E  +T NE +               GG       E  PF SFQQ
Sbjct: 177 IINEASKTEGNDEKAAEDEKTGNEGK------------EDKGGENADSSAEAPPFSSFQQ 224

Query: 839 LSSSQNXXXXXXXXXXXXXXXXXXPISKDGSTIDSGFSKSTLFSNLG 979
           LSSSQN                   ISKDGS +  G S  +LF   G
Sbjct: 225 LSSSQNAFTGLAGTGFSSSTFSFGSISKDGSGL--GGSSGSLFGPKG 269


>ref|XP_003632864.1| PREDICTED: uncharacterized protein LOC100265296 [Vitis vinifera]
          Length = 417

 Score =  109 bits (273), Expect = 9e-22
 Identities = 94/281 (33%), Positives = 127/281 (45%)
 Frame = +2

Query: 137 MGDAEDTLAPSKKRTAVRQITKENPGLXXXXXXXXXXXXXFKKASDDVLASRRIVKVRRQ 316
           MGDAE+ + PSKKR A R+++++NPGL             FKKAS++V+A+RRIVKVRRQ
Sbjct: 1   MGDAENAVPPSKKRAAGRELSRDNPGLDDEESPEQEGET-FKKASNEVMANRRIVKVRRQ 59

Query: 317 QPSATPSAASNPFAGIRXXXXXXXXXXXXXXXXXXESVNLVSDDIREKNGVNMETEKGKD 496
           Q ++TPS  SNPFAGIR                  E ++  ++   E    + +  +G  
Sbjct: 60  QTASTPS--SNPFAGIR-------------LVPPTEPISAPAEVSTEAQAASEKISRG-- 102

Query: 497 YSDKKSECKVEEEGTESILEDERTETAGKVEDDKKLQSFAEPDTESMVSQGKDNTIGVTT 676
               K+E   E +GTE     E+ E   + E +       E   ES   + K + I   +
Sbjct: 103 ---TKNEKDDESKGTEK----EKDENVKQPESETD-----ESVAESAADKEKSDIINEAS 150

Query: 677 NLEQADVKIDELNETKNEAETHTDXXXXXXXXXXXGGSVDVQKNEVTPFGSFQQLSSSQN 856
             E  D K  E  +T+NE +               GG       E  PF SFQQLSSSQN
Sbjct: 151 KTEGNDEKAAEDEKTRNEGK------------EDKGGENADSSAEAPPFSSFQQLSSSQN 198

Query: 857 XXXXXXXXXXXXXXXXXXPISKDGSTIDSGFSKSTLFSNLG 979
                              ISKDGS +  G S  +LF   G
Sbjct: 199 AFTGLAGTGFSSSAFSFGSISKDGSGL--GGSSGSLFGPKG 237


>ref|XP_002299634.1| predicted protein [Populus trichocarpa] gi|222846892|gb|EEE84439.1|
           predicted protein [Populus trichocarpa]
          Length = 469

 Score =  107 bits (266), Expect = 6e-21
 Identities = 93/293 (31%), Positives = 126/293 (43%), Gaps = 23/293 (7%)
 Frame = +2

Query: 137 MGDAEDTLAPSKKRTAVRQITKENPGLXXXXXXXXXXXXXFKKASDDVLASRRIVKVRRQ 316
           MGDAE++L PSKKR A R+I+++NPGL             FK+AS++VLA RRIVKVRR 
Sbjct: 1   MGDAENSLPPSKKRAAGREISRDNPGL-DDDDSVEQETGTFKRASEEVLAGRRIVKVRRN 59

Query: 317 QPSATPSAASNPFAGIRXXXXXXXXXXXXXXXXXXESVNLVSDDIREKNGVNMETEKGKD 496
           Q ++TPS  SNPFA IR                  +       +      V    E  K+
Sbjct: 60  QTTSTPS--SNPFASIRLVPPTEPIAGTAVATTEGQGEKTEQSESEIDKPVAESAEDKKN 117

Query: 497 YSDKKS----ECKVEEEGTESILEDERTETAGKVED--------DKKLQSFAEP------ 622
             DK+     E K +E   E+ ++ E  E  G  +D        DK+    +E       
Sbjct: 118 AVDKEKSKEPEGKTDEPVAETAMDKESVEDKGNTKDEPVTEIATDKEKGEESEGKVDEPV 177

Query: 623 -----DTESMVSQGKDNTIGVTTNLEQADVKIDELNETKNEAETHTDXXXXXXXXXXXGG 787
                D ES   +G ++T+   T L+  + K  E +ET+ E  T  D             
Sbjct: 178 AGTAIDKESAEDKGNNSTVNEATELKVDNEKPLE-DETEKEKATGDDDAENQDKKDNGSE 236

Query: 788 SVDVQKNEVTPFGSFQQLSSSQNXXXXXXXXXXXXXXXXXXPISKDGSTIDSG 946
           +VD   +E  P  SFQQLSSSQN                     KDGS +  G
Sbjct: 237 NVD-PSSEGAPLNSFQQLSSSQNAFTGLAGTGFSTTSFTFGSFPKDGSVMGGG 288


>ref|XP_002304181.1| predicted protein [Populus trichocarpa] gi|222841613|gb|EEE79160.1|
           predicted protein [Populus trichocarpa]
          Length = 437

 Score =  106 bits (264), Expect = 1e-20
 Identities = 89/275 (32%), Positives = 125/275 (45%), Gaps = 5/275 (1%)
 Frame = +2

Query: 137 MGDAEDTLAPSKKRTAVRQITKENPGLXXXXXXXXXXXXXFKKASDDVLASRRIVKVRRQ 316
           MGDAE+ L  SKKR A  +I+++NPGL             FKKASD+VLA R+IVKVRR 
Sbjct: 1   MGDAENALTSSKKRAASSEISRDNPGLDDDGSVEQETGT-FKKASDEVLARRKIVKVRRS 59

Query: 317 QPSATPSAASNPFAGIRXXXXXXXXXXXXXXXXXXESV-NLVSDDIREKNGVNMETEKGK 493
           Q ++TPS  SNPFAGIR                   S    VS++   ++    E EKGK
Sbjct: 60  QTTSTPS--SNPFAGIRLVPPTEPIAAPAVATIEVVSARQQVSEE--GQSDTCEEVEKGK 115

Query: 494 DYSDKKSECKVEEEGTESILEDERTETAGKVEDDKKLQSFAEPDTESMVSQGKDNTIGVT 673
               + SE +++    + + E++  E+ GK +         EP  E+ + +      G+ 
Sbjct: 116 GEKSELSESEID----KPVAEEKSKESEGKTD---------EPVAENAIEKESSEDKGIN 162

Query: 674 TNLEQA-DVKIDELNETKNEAET---HTDXXXXXXXXXXXGGSVDVQKNEVTPFGSFQQL 841
           + + +A + K+D  NE   E ET   +             G  +     E  P  SFQQL
Sbjct: 163 SAVNEATESKVD--NEKPAEDETDKENAGGDAENQDKKDNGNEIVYPSTEGAPLNSFQQL 220

Query: 842 SSSQNXXXXXXXXXXXXXXXXXXPISKDGSTIDSG 946
           SSSQN                   + KDGS + SG
Sbjct: 221 SSSQNAFTGLAGTGFSTSTFTFGSVPKDGSVLGSG 255


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