BLASTX nr result

ID: Bupleurum21_contig00016497 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016497
         (1906 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64891.1| hypothetical protein VITISV_016440 [Vitis vinifera]   229   3e-57
emb|CBI30061.3| unnamed protein product [Vitis vinifera]              225   3e-56
ref|XP_002530101.1| conserved hypothetical protein [Ricinus comm...   189   3e-45
ref|XP_002308920.1| predicted protein [Populus trichocarpa] gi|2...   188   5e-45
ref|XP_003554150.1| PREDICTED: uncharacterized protein LOC100775...   171   6e-40

>emb|CAN64891.1| hypothetical protein VITISV_016440 [Vitis vinifera]
          Length = 1088

 Score =  229 bits (583), Expect = 3e-57
 Identities = 156/469 (33%), Positives = 212/469 (45%), Gaps = 13/469 (2%)
 Frame = -2

Query: 1647 GRRRYRADNHNQEDSK---VNRKPSVGDWQQTVPSWEKKFCTSICKVPWKKIVDAKKYMP 1477
            G RR + D H+QE  K   +NRKP +G+WQ TVPSWEKKFC+S+    W+++++ K+++ 
Sbjct: 2    GGRRRQGDYHHQESQKTRSLNRKPPLGNWQPTVPSWEKKFCSSVGSFSWQRLLENKRFIY 61

Query: 1476 CHDNVVNWDDSAAKEAFDNAKRRYYAKIHGLPCEIEVPDPDIYIDEIGWNTQADNHLILD 1297
             +DNV+ W+DSA +EAF NAK R++A+I+GLPC+I +PDPDIYIDEI WN   D  +ILD
Sbjct: 62   LYDNVLQWNDSAGEEAFHNAKNRFWAQINGLPCDISLPDPDIYIDEIDWNCSIDPEMILD 121

Query: 1296 LARKPVDL--TVKKRDNIVIFGDTFLQDQGFSSTGWGDGAEELKENPDSSHANKEHPKAS 1123
            L R+PVD    VK      +     L +Q FS TGWGD  E++ +  D            
Sbjct: 122  LEREPVDPDDCVKSEKVSSLGNSLLLLNQSFSCTGWGDAEEDIGKXADIPSG-------- 173

Query: 1122 NVNKEIPNL--YNVNEDKPWEQKPGQSIGPIEGSAWTNSGYEDKPWEQKP-GQCKGPVEG 952
                  P L  +N N D PWE    Q+ G ++ + W   G  ++P E    G C  PVE 
Sbjct: 174  ------PGLWHHNQNVDNPWELSCTQNKGAVKATGW---GDSEEPVEATGWGDCGEPVEA 224

Query: 951  NVWRKSGYEDKPWDQISGQNNGPVDGHAWTKSDYKDKPWEQKPFQYNGPVEGNA---WTN 781
              W              G  N PV    W  S              N PV+      W +
Sbjct: 225  TGW--------------GNTNEPVKATGWGNS--------------NEPVKATGWGDWDH 256

Query: 780  SGYNSWGWDDNXXXXXXXXXXXXXXXXXXXXXGDGWNDSRGWYQYGNNYAQDYVQDDPNA 601
                + GW D                       DGWN+S GW QY N Y       D  A
Sbjct: 257  QPVEATGWGD------------YYGTMEVPIWKDGWNNSSGWNQYENKYNDLENLKDRRA 304

Query: 600  FYGGAWYFSDRHKEDSSNFVPGYISYMPGHFDYMAGDDNYRPSNNSYMPGHETSRFLDNN 421
              GG W                             G+ N R     YM  + +SRF DN 
Sbjct: 305  --GGVW---------------------------GTGNGNSRGEEVGYMSRYRSSRFHDNE 335

Query: 420  YQKNQSRTNVDGAITRGNFLSEQPT-TDKWTPSRAQLTT-SCAPLTSQV 280
            YQ ++   +  G   R NFL ++ +  DK   S+ + T   C PL  ++
Sbjct: 336  YQADRGWRS--GGRKRANFLFDEGSFLDKKAASQPRNTIHHCGPLLQKI 382


>emb|CBI30061.3| unnamed protein product [Vitis vinifera]
          Length = 381

 Score =  225 bits (574), Expect = 3e-56
 Identities = 156/479 (32%), Positives = 216/479 (45%), Gaps = 10/479 (2%)
 Frame = -2

Query: 1647 GRRRYRADNHNQEDSK---VNRKPSVGDWQQTVPSWEKKFCTSICKVPWKKIVDAKKYMP 1477
            G RR + D H+QE  K   +NRKP +G+WQ TVPSWEKKFC+S+    W+++++ K+++ 
Sbjct: 2    GGRRRQGDYHHQESQKTRSLNRKPPLGNWQPTVPSWEKKFCSSVGSFSWQRLLENKRFIY 61

Query: 1476 CHDNVVNWDDSAAKEAFDNAKRRYYAKIHGLPCEIEVPDPDIYIDEIGWNTQADNHLILD 1297
             +DNV+ W+DSA +EAF NAK R++A+I+GLPC+I +PDPDIYIDEI WN   D  +ILD
Sbjct: 62   LYDNVLQWNDSAGEEAFHNAKNRFWAQINGLPCDISLPDPDIYIDEIDWNCSIDPEMILD 121

Query: 1296 LARKPVDL--TVKKRDNIVIFGDTFLQDQGFSSTGWGDGAEELKENPDSSHANKEHPKAS 1123
            L R+PVD    VK      +     L +Q FS TGWGD  E++ +  D            
Sbjct: 122  LEREPVDPDDCVKSEKVSSLGNSLLLLNQSFSCTGWGDAEEDIGKAADIPSG-------- 173

Query: 1122 NVNKEIPNL--YNVNEDKPWEQKPGQSIGPIEGSAWTNSGYEDKPWEQKPGQCKGPVEGN 949
                  P L  +N N D PWE    Q+ GP+E + W              G    PV+  
Sbjct: 174  ------PGLWHHNQNVDNPWELSCTQNKGPVEATGW--------------GNTNEPVKAT 213

Query: 948  VWRKSGYEDKPWDQISGQNNGPVDGHAWTKSDYKDKPWEQKPF-QYNGPVEGNAWTNSGY 772
             W              G +N PV    W   D+  +P E   +  Y G +E   W +   
Sbjct: 214  GW--------------GNSNEPVKATGW--GDWDHQPVEATGWGDYYGAMEVPIWKD--- 254

Query: 771  NSWGWDDNXXXXXXXXXXXXXXXXXXXXXGDGWNDSRGWYQYGNNYAQDYVQDDPNAFYG 592
               GW                            N+S GW QY N Y       D  A  G
Sbjct: 255  ---GW----------------------------NNSSGWNQYENKYNDLENLKDRRA--G 281

Query: 591  GAWYFSDRHKEDSSNFVPGYISYMPGHFDYMAGDDNYRPSNNSYMPGHETSRFLDNNYQK 412
            G W                             G+ N R     YM  + +SRF DN YQ 
Sbjct: 282  GVW---------------------------GTGNGNSRGEEVGYMSRYRSSRFHDNEYQA 314

Query: 411  NQSRTNVDGAITRGNFLSEQPT-TDKWTPSRAQLTT-SCAPLTSQVSGKSQGRWTMEKP 241
            ++   +  G   R NFL ++ +  DK   S+ + T   C P++   SGK+   W+ +KP
Sbjct: 315  DRGWRS--GGRKRANFLFDEGSFLDKKAASQPRNTIHHCGPVSHHGSGKAGNSWSWKKP 371


>ref|XP_002530101.1| conserved hypothetical protein [Ricinus communis]
            gi|223530412|gb|EEF32300.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 291

 Score =  189 bits (479), Expect = 3e-45
 Identities = 114/310 (36%), Positives = 166/310 (53%), Gaps = 19/310 (6%)
 Frame = -2

Query: 1653 MEGRRRYRADNHNQE----DSKVNRKPSVGDWQQTVPSWEKKFCTSICKVPWKKIVDAKK 1486
            M  RRR++ + HNQE     S+  + P  G+WQ TVPSWEK+FC ++  VPW+K+++ KK
Sbjct: 1    MSNRRRHKGEIHNQEVQGTRSQHRKPPFHGNWQPTVPSWEKRFCYAVGLVPWRKLLETKK 60

Query: 1485 YMPCHDNVVNWDDSAAKEAFDNAKRRYYAKIHGLPCEIEVPDPDIYIDEIGWNTQADNHL 1306
             M  ++NVV W+DSA +EAF NAK R++A+I+GL C+I +PDPDIYIDEI W++  D+ L
Sbjct: 61   SMYLYENVVQWNDSAGEEAFHNAKNRFWAEINGLHCDISLPDPDIYIDEIDWSSNIDSEL 120

Query: 1305 ILDLARKPVDLTVK-KRDNIVIFGDTFLQDQGFSSTGWGDGAEELKENP----DSSH--- 1150
             LDL R+P     K K + +VIFG + L +Q FS TGWG+  EEL++      DS +   
Sbjct: 121  YLDLEREPKYPAEKDKGEEVVIFGSSLL-NQSFSCTGWGEAEEELQKAGTRALDSGYRDC 179

Query: 1149 ---ANKEHPKASNVNKEIPNLYNVNEDKPWEQKPGQSIGPIEGSAWTNSGYEDKPWEQKP 979
                N E+P+ASN                    P Q+ G +  + W N   +   W+   
Sbjct: 180  GQKGNNENPQASN--------------------PYQADGAMINNEWGNRWNDPYEWKNSY 219

Query: 978  GQCKGPVEGNVWR----KSGYEDKPWDQISGQNNGPVDGHAWTKSDYKDKPWEQKPFQYN 811
             +  G  + N W     ++G +   WD    +N+   +G  W  S YK   +     Q +
Sbjct: 220  NERGG--DNNEWNEVGDRTGGDWGTWD----ENSRKREGAGWNMSRYKTSRFHNDEHQMD 273

Query: 810  GPVEGNAWTN 781
                G  W N
Sbjct: 274  ---RGGWWRN 280


>ref|XP_002308920.1| predicted protein [Populus trichocarpa] gi|222854896|gb|EEE92443.1|
            predicted protein [Populus trichocarpa]
          Length = 267

 Score =  188 bits (477), Expect = 5e-45
 Identities = 108/286 (37%), Positives = 157/286 (54%), Gaps = 16/286 (5%)
 Frame = -2

Query: 1653 MEGRRRYRADNHNQED------SKVNRKPSVGDWQQTVPSWEKKFCTSICKVPWKKIVDA 1492
            M  RRR+R + +  ++      S+  + P  G WQ TVPSWEK+FC S+  +PW+K+++ 
Sbjct: 1    MNNRRRHRGEIYQHQEVQRTTRSRSRKPPHHGSWQPTVPSWEKRFCYSVGSIPWRKLLET 60

Query: 1491 KKYMPCHDNVVNWDDSAAKEAFDNAKRRYYAKIHGLPCEIEVPDPDIYIDEIGWNTQADN 1312
            KK M  ++NVV W+DSA +EAF NAK R++A+I+GLPC I +PDPDIYIDEI WN+  D 
Sbjct: 61   KKLMYLYENVVKWNDSAGEEAFHNAKNRFWAEINGLPCNISLPDPDIYIDEIDWNSSVDP 120

Query: 1311 HLILDLARKPVDL-TVKKRDNIVIFGDTFLQDQGFSSTGWGDGAEELKENPDSS----HA 1147
             L+LDL R+P D   + K + +VI G + L +Q FS  GWG   EE ++ PDS+    H 
Sbjct: 121  ELLLDLEREPKDHDEITKGEEVVIIGSSLLLNQSFSCAGWGGAEEEFQKVPDSALDPGHW 180

Query: 1146 NKEHPKASNVNKEIPNLYNVNE---DKPWEQKPGQSIGPIEGSAWTNS-GYEDKPWE-QK 982
            +  H   S+ N    N+ + NE   D  W+              W +S G+ +  W+   
Sbjct: 181  DFNHKVTSDENPCRRNVTHPNEAMNDDGWD-------------CWNDSFGWGNNEWDVNN 227

Query: 981  PGQCKGPVEGNVWRKSGYEDKPWDQISGQNNGPVDGHAWTKSDYKD 844
             G+       NV   +G +   W  + G N    +G  W  S YK+
Sbjct: 228  DGK-------NVNDGTGGD---WGTLDGYNQSR-EGTGWQMSSYKN 262


>ref|XP_003554150.1| PREDICTED: uncharacterized protein LOC100775807 [Glycine max]
          Length = 326

 Score =  171 bits (433), Expect = 6e-40
 Identities = 85/175 (48%), Positives = 114/175 (65%), Gaps = 8/175 (4%)
 Frame = -2

Query: 1653 MEGRRRYRADNHNQED---SKVNRKPSVGD-WQQTVPSWEKKFCTSICKVPWKKIVDAKK 1486
            M   R+ + ++H+Q     S  NRKP +GD W  TVP+WE+KFCTSI  VPW+K+V++KK
Sbjct: 1    MANWRKQQGESHHQVGQWRSSYNRKPPLGDKWHSTVPAWERKFCTSIGSVPWRKLVESKK 60

Query: 1485 YMPCHDNVVNWDDSAAKEAFDNAKRRYYAKIHGLPCEIEVPDPDIYIDEIGWNTQADNHL 1306
            YM   ++VVNWDDSA KEAFDNAK RY+A+I+G+PC I +PDP+IY DE+ WN   D  L
Sbjct: 61   YMHLFEHVVNWDDSAGKEAFDNAKMRYWAEINGVPCNISLPDPNIYTDEVDWNAIVDPQL 120

Query: 1305 ILD----LARKPVDLTVKKRDNIVIFGDTFLQDQGFSSTGWGDGAEELKENPDSS 1153
            ILD    LA+ P +      + ++I G  FL +Q    TGW D       NP+S+
Sbjct: 121  ILDMEMELAKVPNEELRNDHEIVMIGGALFLNEQQLPCTGWDDDYAAEAPNPNSA 175


Top