BLASTX nr result

ID: Bupleurum21_contig00016493 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016493
         (1248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274348.2| PREDICTED: uncharacterized protein LOC100243...    94   6e-17
emb|CBI28328.3| unnamed protein product [Vitis vinifera]               94   6e-17
emb|CAN76792.1| hypothetical protein VITISV_026679 [Vitis vinifera]    87   9e-15
ref|XP_002523795.1| conserved hypothetical protein [Ricinus comm...    86   2e-14
ref|XP_002311946.1| predicted protein [Populus trichocarpa] gi|2...    86   3e-14

>ref|XP_002274348.2| PREDICTED: uncharacterized protein LOC100243326 [Vitis vinifera]
          Length = 1190

 Score = 94.4 bits (233), Expect = 6e-17
 Identities = 60/138 (43%), Positives = 84/138 (60%), Gaps = 2/138 (1%)
 Frame = -3

Query: 1105 MLSSVRSVNRASTT--SDISPVSQKLSLEQIAFEYQEYAHSPDLKQILGVSLGNSFEGHC 932
            M+SS  + NR S+   +D+ P+   L LE I     +Y  S +L+++LGVSLG++ E H 
Sbjct: 1    MVSSGNNSNRGSSMLPADMPPLPHCLPLEPITLGNPKYTRSGELRKVLGVSLGSTSEDHS 60

Query: 931  IGVSELKPIPPSLFENLKMFKYTSM*DTLGSARDRVIFWQKSIYKLDKFVETARSRN*QR 752
             GV+  KP PP   E LK FK  S+ DT   ARDRV  ++ SI+KLDK+ E   S+  QR
Sbjct: 61   FGVAHSKPSPPVATEELKHFK-ESIIDTRKKARDRVKTFRDSIFKLDKYREALGSKKRQR 119

Query: 751  TDHLSNKRFGHRNILKMG 698
            TD   ++R G  N+LK+G
Sbjct: 120  TD--LSERSGGANLLKVG 135



 Score = 57.8 bits (138), Expect = 6e-06
 Identities = 44/141 (31%), Positives = 73/141 (51%), Gaps = 9/141 (6%)
 Frame = -2

Query: 596 VGEDIHIEEKVATLPVXXXXXXXXXXXXRSFRSAGNRLVSVEKNRKQAVHGKLSAESMLQ 417
           VG  + IEEKV  LP             RS  +  +R+++ +++ K+A+H +L+AES L+
Sbjct: 197 VGASVQIEEKVNRLPAGGEGWDKKMKRKRSVGAVVSRVLNGDRDTKRAIHPRLNAESKLR 256

Query: 416 PLPAQSFVSRASSKMVRIHNSVKSSLITHLDSSTESKIENEDAPQLRDSSTIAE--IASE 243
              A SF SR+S  +  ++ S  SS     ++ T  + E +  P  R+ +T  E  I ++
Sbjct: 257 SGDAHSFRSRSSPGVSGMNKSEDSSEPASSNACTVRRNELDSVPLPRERTTAMEQRIVAK 316

Query: 242 GKNKAD-------GSVNRVVK 201
           G NK +       GS +RV+K
Sbjct: 317 GNNKPNIHEDNPGGSPSRVIK 337


>emb|CBI28328.3| unnamed protein product [Vitis vinifera]
          Length = 1146

 Score = 94.4 bits (233), Expect = 6e-17
 Identities = 60/138 (43%), Positives = 84/138 (60%), Gaps = 2/138 (1%)
 Frame = -3

Query: 1105 MLSSVRSVNRASTT--SDISPVSQKLSLEQIAFEYQEYAHSPDLKQILGVSLGNSFEGHC 932
            M+SS  + NR S+   +D+ P+   L LE I     +Y  S +L+++LGVSLG++ E H 
Sbjct: 1    MVSSGNNSNRGSSMLPADMPPLPHCLPLEPITLGNPKYTRSGELRKVLGVSLGSTSEDHS 60

Query: 931  IGVSELKPIPPSLFENLKMFKYTSM*DTLGSARDRVIFWQKSIYKLDKFVETARSRN*QR 752
             GV+  KP PP   E LK FK  S+ DT   ARDRV  ++ SI+KLDK+ E   S+  QR
Sbjct: 61   FGVAHSKPSPPVATEELKHFK-ESIIDTRKKARDRVKTFRDSIFKLDKYREALGSKKRQR 119

Query: 751  TDHLSNKRFGHRNILKMG 698
            TD   ++R G  N+LK+G
Sbjct: 120  TD--LSERSGGANLLKVG 135



 Score = 57.8 bits (138), Expect = 6e-06
 Identities = 44/141 (31%), Positives = 73/141 (51%), Gaps = 9/141 (6%)
 Frame = -2

Query: 596 VGEDIHIEEKVATLPVXXXXXXXXXXXXRSFRSAGNRLVSVEKNRKQAVHGKLSAESMLQ 417
           VG  + IEEKV  LP             RS  +  +R+++ +++ K+A+H +L+AES L+
Sbjct: 197 VGASVQIEEKVNRLPAGGEGWDKKMKRKRSVGAVVSRVLNGDRDTKRAIHPRLNAESKLR 256

Query: 416 PLPAQSFVSRASSKMVRIHNSVKSSLITHLDSSTESKIENEDAPQLRDSSTIAE--IASE 243
              A SF SR+S  +  ++ S  SS     ++ T  + E +  P  R+ +T  E  I ++
Sbjct: 257 SGDAHSFRSRSSPGVSGMNKSEDSSEPASSNACTVRRNELDSVPLPRERTTAMEQRIVAK 316

Query: 242 GKNKAD-------GSVNRVVK 201
           G NK +       GS +RV+K
Sbjct: 317 GNNKPNIHEDNPGGSPSRVIK 337


>emb|CAN76792.1| hypothetical protein VITISV_026679 [Vitis vinifera]
          Length = 493

 Score = 87.0 bits (214), Expect = 9e-15
 Identities = 53/118 (44%), Positives = 72/118 (61%)
 Frame = -3

Query: 1051 PVSQKLSLEQIAFEYQEYAHSPDLKQILGVSLGNSFEGHCIGVSELKPIPPSLFENLKMF 872
            P+   L LE I     +Y  S +L+++LGVSLG++ E H  GV+  KP PP   E LK F
Sbjct: 3    PLPHCLPLEPITLGNPKYTRSGELRKVLGVSLGSTSEDHSFGVAHSKPSPPVATEELKHF 62

Query: 871  KYTSM*DTLGSARDRVIFWQKSIYKLDKFVETARSRN*QRTDHLSNKRFGHRNILKMG 698
            K  S+ DT   ARDRV  ++ SI+KLDK+ E   S+  QRTD   ++R G  N+LK+G
Sbjct: 63   K-ESIIDTRKKARDRVKTFRDSIFKLDKYREALGSKKRQRTD--LSERSGGANLLKVG 117


>ref|XP_002523795.1| conserved hypothetical protein [Ricinus communis]
            gi|223536883|gb|EEF38521.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1237

 Score = 85.9 bits (211), Expect = 2e-14
 Identities = 54/139 (38%), Positives = 80/139 (57%), Gaps = 2/139 (1%)
 Frame = -3

Query: 1108 MMLSSVRSVNRAST--TSDISPVSQKLSLEQIAFEYQEYAHSPDLKQILGVSLGNSFEGH 935
            M+ S   +++R S   +SD+ P++Q L LEQI    Q+Y    +L++ LGV LG++ E +
Sbjct: 1    MLSSGNNNLSRGSAAISSDLPPLTQCLPLEQITLGNQKYTRCGELRRALGVPLGSASEDY 60

Query: 934  CIGVSELKPIPPSLFENLKMFKYTSM*DTLGSARDRVIFWQKSIYKLDKFVETARSRN*Q 755
              GVS  KP   +  E LK FK  S+ DT   ARDR   W+ S++KLDK+ E   S+  Q
Sbjct: 61   SFGVSHPKPQSLAGTEELKHFK-ESVQDTSRKARDRAKMWRDSLFKLDKYREALSSKKRQ 119

Query: 754  RTDHLSNKRFGHRNILKMG 698
            R++   N+R     + KMG
Sbjct: 120  RSELPLNERSNGATLAKMG 138


>ref|XP_002311946.1| predicted protein [Populus trichocarpa] gi|222851766|gb|EEE89313.1|
            predicted protein [Populus trichocarpa]
          Length = 1306

 Score = 85.5 bits (210), Expect = 3e-14
 Identities = 52/154 (33%), Positives = 83/154 (53%), Gaps = 2/154 (1%)
 Frame = -3

Query: 1153 ATFIDLGTYCKGLECMMLSSVRSVNRASTTS--DISPVSQKLSLEQIAFEYQEYAHSPDL 980
            A+F   G++ +  E  M SS  S  RAS +    + P++Q LSL+ +     +Y  + +L
Sbjct: 34   ASFDRSGSFRESSESRMFSSGASTPRASASPARSMGPLTQHLSLDPVTMGDPKYTRTGEL 93

Query: 979  KQILGVSLGNSFEGHCIGVSELKPIPPSLFENLKMFKYTSM*DTLGSARDRVIFWQKSIY 800
            K+  G+SLG++ E +  G +  KP P    E LK  +   + D    +R+R   W +++ 
Sbjct: 94   KRAFGISLGSATEDNSFGAAHSKPPPAVDVEELKRIR-AGVLDDYRKSRNRAKMWNENLL 152

Query: 799  KLDKFVETARSRN*QRTDHLSNKRFGHRNILKMG 698
            +L KF E   S+N QR++ L N+R G  N LKMG
Sbjct: 153  RLQKFPEDLNSKNQQRSEMLMNERSGGSNFLKMG 186


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