BLASTX nr result
ID: Bupleurum21_contig00016438
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00016438
(1659 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002520881.1| conserved hypothetical protein [Ricinus comm... 187 2e-83
ref|XP_002275253.1| PREDICTED: U-box domain-containing protein 6... 177 9e-83
emb|CBI25354.3| unnamed protein product [Vitis vinifera] 177 9e-83
emb|CAN61689.1| hypothetical protein VITISV_024206 [Vitis vinifera] 177 3e-80
ref|XP_003528015.1| PREDICTED: U-box domain-containing protein 6... 180 3e-79
>ref|XP_002520881.1| conserved hypothetical protein [Ricinus communis]
gi|223540012|gb|EEF41590.1| conserved hypothetical
protein [Ricinus communis]
Length = 394
Score = 187 bits (476), Expect(2) = 2e-83
Identities = 121/290 (41%), Positives = 156/290 (53%), Gaps = 13/290 (4%)
Frame = +3
Query: 441 QLLFHDNTGSIHRFPPFQRHSGDPGPKTTREFTAGFIDD--------SRRFYQPQHGPEF 596
Q +F D+ + P +R GDPGPKTT AGFIDD + Y P GPEF
Sbjct: 14 QFVFQDDPLRFNCGPTNRRVGGDPGPKTTTRELAGFIDDKLFSSSAATNDRYFPS-GPEF 72
Query: 597 RHAIYATPIHTWNVNGRPSDSHGSXXXXXXXXXXXXXXXXXXXLNEGINRGSLLVKEKND 776
+Y WN NG + + G EG + S +K++
Sbjct: 73 PRNMY----RNWNGNGNGNGTSGEESDGDDVEDEDMDDDDEDDDVEGGDDNSNSNNDKSN 128
Query: 777 VS----TRXXXXXXXXXXXXXVGVSACDNPYHSAGVTVAGTAGNLYQLQHYLLEGSTSAR 944
++ T +G HS+ G +Y Q+ +
Sbjct: 129 INKATTTTTSTTTGNNNVDKIIGNGNGKPKQHSS----FEADGEIYYSQYLQANEGSGNG 184
Query: 945 HKDVSAVENGCSVSGRKDVL-YSSVSGESLRKVFSDPITGSLMDDAMILPCGHSFGSGGM 1121
KD+ A+ENGC SGRK+ +SS SG+SLR + SDP+TG+LMDDAMILPCGHSFG GG+
Sbjct: 185 GKDM-ALENGCGFSGRKEASSFSSDSGDSLRAILSDPVTGALMDDAMILPCGHSFGVGGI 243
Query: 1122 QHVIKTKACYTCSQPVSEDSVATNLSLQAAVQAFRREEEMQVYRTSKRKK 1271
QH+I+TKACYTCSQ +EDSVA NLSL+AAVQAFRREEE+Q YR+SKRK+
Sbjct: 244 QHIIRTKACYTCSQSTTEDSVAPNLSLRAAVQAFRREEELQFYRSSKRKR 293
Score = 149 bits (377), Expect(2) = 2e-83
Identities = 74/91 (81%), Positives = 81/91 (89%), Gaps = 1/91 (1%)
Frame = +1
Query: 1300 YGDISLSD-PRSKGVQFPFSVTDRVIIKGNKRTPQRFVGREAVVTTQCLNGWYVVKTLDN 1476
+GD + D PR +GVQFPF+VTDRVIIKGNKRTPQRFVGREAVVTTQCLNGWYVVKTLDN
Sbjct: 303 FGDSTAMDAPRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAVVTTQCLNGWYVVKTLDN 362
Query: 1477 AESVKLQYRSLAKVSDEVTTKPLSTKMMPNW 1569
AESVKLQYRSLAKVSD + K LS+K+ PNW
Sbjct: 363 AESVKLQYRSLAKVSDAPSGKALSSKIPPNW 393
>ref|XP_002275253.1| PREDICTED: U-box domain-containing protein 62-like [Vitis vinifera]
Length = 441
Score = 177 bits (448), Expect(2) = 9e-83
Identities = 91/139 (65%), Positives = 107/139 (76%)
Frame = +3
Query: 855 YHSAGVTVAGTAGNLYQLQHYLLEGSTSARHKDVSAVENGCSVSGRKDVLYSSVSGESLR 1034
++ VT+A G++Y Q +L SA + AVENGC SGRKDV S+ SGESL+
Sbjct: 203 HYQNAVTIAEPDGDMYYSQ-FLQGPEGSAPGQKELAVENGCGFSGRKDVSLSTESGESLK 261
Query: 1035 KVFSDPITGSLMDDAMILPCGHSFGSGGMQHVIKTKACYTCSQPVSEDSVATNLSLQAAV 1214
+ SDP+TG+LMDDAMILPCGHSFG GGMQHVIK KAC TCSQP SEDSV NLSL+AAV
Sbjct: 262 AILSDPLTGALMDDAMILPCGHSFGGGGMQHVIKMKACSTCSQPFSEDSVQPNLSLRAAV 321
Query: 1215 QAFRREEEMQVYRTSKRKK 1271
QAFRREEE+QVYRTSKR++
Sbjct: 322 QAFRREEELQVYRTSKRRR 340
Score = 158 bits (400), Expect(2) = 9e-83
Identities = 76/93 (81%), Positives = 84/93 (90%), Gaps = 1/93 (1%)
Frame = +1
Query: 1294 CNYGDISLSD-PRSKGVQFPFSVTDRVIIKGNKRTPQRFVGREAVVTTQCLNGWYVVKTL 1470
C+YGD +L D PR +GVQFPF+VTDRVIIKGNKRTPQRFVGREAVVTTQCLNGWYVVKTL
Sbjct: 348 CSYGDSTLMDTPRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAVVTTQCLNGWYVVKTL 407
Query: 1471 DNAESVKLQYRSLAKVSDEVTTKPLSTKMMPNW 1569
DNAESVKLQYRSLAKV D ++KP+ +KM PNW
Sbjct: 408 DNAESVKLQYRSLAKVPDNPSSKPMLSKMTPNW 440
>emb|CBI25354.3| unnamed protein product [Vitis vinifera]
Length = 384
Score = 177 bits (448), Expect(2) = 9e-83
Identities = 91/139 (65%), Positives = 107/139 (76%)
Frame = +3
Query: 855 YHSAGVTVAGTAGNLYQLQHYLLEGSTSARHKDVSAVENGCSVSGRKDVLYSSVSGESLR 1034
++ VT+A G++Y Q +L SA + AVENGC SGRKDV S+ SGESL+
Sbjct: 146 HYQNAVTIAEPDGDMYYSQ-FLQGPEGSAPGQKELAVENGCGFSGRKDVSLSTESGESLK 204
Query: 1035 KVFSDPITGSLMDDAMILPCGHSFGSGGMQHVIKTKACYTCSQPVSEDSVATNLSLQAAV 1214
+ SDP+TG+LMDDAMILPCGHSFG GGMQHVIK KAC TCSQP SEDSV NLSL+AAV
Sbjct: 205 AILSDPLTGALMDDAMILPCGHSFGGGGMQHVIKMKACSTCSQPFSEDSVQPNLSLRAAV 264
Query: 1215 QAFRREEEMQVYRTSKRKK 1271
QAFRREEE+QVYRTSKR++
Sbjct: 265 QAFRREEELQVYRTSKRRR 283
Score = 158 bits (400), Expect(2) = 9e-83
Identities = 76/93 (81%), Positives = 84/93 (90%), Gaps = 1/93 (1%)
Frame = +1
Query: 1294 CNYGDISLSD-PRSKGVQFPFSVTDRVIIKGNKRTPQRFVGREAVVTTQCLNGWYVVKTL 1470
C+YGD +L D PR +GVQFPF+VTDRVIIKGNKRTPQRFVGREAVVTTQCLNGWYVVKTL
Sbjct: 291 CSYGDSTLMDTPRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAVVTTQCLNGWYVVKTL 350
Query: 1471 DNAESVKLQYRSLAKVSDEVTTKPLSTKMMPNW 1569
DNAESVKLQYRSLAKV D ++KP+ +KM PNW
Sbjct: 351 DNAESVKLQYRSLAKVPDNPSSKPMLSKMTPNW 383
>emb|CAN61689.1| hypothetical protein VITISV_024206 [Vitis vinifera]
Length = 452
Score = 177 bits (448), Expect(2) = 3e-80
Identities = 91/139 (65%), Positives = 107/139 (76%)
Frame = +3
Query: 855 YHSAGVTVAGTAGNLYQLQHYLLEGSTSARHKDVSAVENGCSVSGRKDVLYSSVSGESLR 1034
++ VT+A G++Y Q +L SA + AVENGC SGRKDV S+ SGESL+
Sbjct: 203 HYQNAVTIAEPDGDMYYSQ-FLQGPEGSAPGQKELAVENGCGFSGRKDVSLSTESGESLK 261
Query: 1035 KVFSDPITGSLMDDAMILPCGHSFGSGGMQHVIKTKACYTCSQPVSEDSVATNLSLQAAV 1214
+ SDP+TG+LMDDAMILPCGHSFG GGMQHVIK KAC TCSQP SEDSV NLSL+AAV
Sbjct: 262 AILSDPLTGALMDDAMILPCGHSFGGGGMQHVIKMKACSTCSQPFSEDSVQPNLSLRAAV 321
Query: 1215 QAFRREEEMQVYRTSKRKK 1271
QAFRREEE+QVYRTSKR++
Sbjct: 322 QAFRREEELQVYRTSKRRR 340
Score = 150 bits (378), Expect(2) = 3e-80
Identities = 76/104 (73%), Positives = 84/104 (80%), Gaps = 12/104 (11%)
Frame = +1
Query: 1294 CNYGDISLSD-PRSKGVQFPFSVTDRVIIK-----------GNKRTPQRFVGREAVVTTQ 1437
C+YGD +L D PR +GVQFPF+VTDRVIIK GNKRTPQRFVGREAVVTTQ
Sbjct: 348 CSYGDSTLMDTPRGRGVQFPFAVTDRVIIKLQLTIREKMDQGNKRTPQRFVGREAVVTTQ 407
Query: 1438 CLNGWYVVKTLDNAESVKLQYRSLAKVSDEVTTKPLSTKMMPNW 1569
CLNGWYVVKTLDNAESVKLQYRSLAKV D ++KP+ +KM PNW
Sbjct: 408 CLNGWYVVKTLDNAESVKLQYRSLAKVPDNPSSKPMLSKMTPNW 451
>ref|XP_003528015.1| PREDICTED: U-box domain-containing protein 62-like [Glycine max]
Length = 428
Score = 180 bits (457), Expect(2) = 3e-79
Identities = 131/353 (37%), Positives = 172/353 (48%), Gaps = 36/353 (10%)
Frame = +3
Query: 339 MAAEEMSLLPTSTAPVATTHHRHDNGGAINPPPHQLLFHDNTGSIHRFPPFQRHSGDPGP 518
M++E+++L+P R +NG +N P L+F D+ + P R GDP P
Sbjct: 1 MSSEDITLVPDQ---------RIENG--LNSP---LVFQDDPLRFNCPTPHHRRVGDPPP 46
Query: 519 KTTREFTAGFIDDSR------RFYQPQHGPEFRHAIYATPIH---TWNVNGRPSDSHGSX 671
KT RE FIDD++ RF+ H PEFR + WN NG ++ S
Sbjct: 47 KT-REL-GSFIDDNKMFIDRDRFFAAAHNPEFRRYADCSARRDPRNWNTNGSATEDDDSD 104
Query: 672 XXXXXXXXXXXXXXXXXXL-------------NEGINRGSLLVKEKND-----VSTRXXX 797
L N G G L N V+ R
Sbjct: 105 DDDEDDDDDEEDDTEVEGLVGDGTKSELKINNNNGAGGGGNLPAVANGKAHSYVAGRQLL 164
Query: 798 XXXXXXXXXXV--GVSACDNPYHSAG-------VTVAGTAGNLYQLQHYLLEGSTSARHK 950
V VS D + G VTVA T Y + L+G A +
Sbjct: 165 VKDGGDIGQLVHSNVSGGDEDHRQEGLGKSQNSVTVAETDCEEYY--SHFLQGGEGASGQ 222
Query: 951 DVSAVENGCSVSGRKDVLYSSVSGESLRKVFSDPITGSLMDDAMILPCGHSFGSGGMQHV 1130
V ++GC SGRKD +YSS SGESLR + SDP+TG+LMDDA+ILPCGHSFG GG+QHV
Sbjct: 223 KVMVDDSGCGFSGRKDAMYSSESGESLRAILSDPVTGALMDDAVILPCGHSFGGGGIQHV 282
Query: 1131 IKTKACYTCSQPVSEDSVATNLSLQAAVQAFRREEEMQVYRTSKRKKREI*RG 1289
I+ KAC TCSQP +E+S++ NLSL+ AVQA+RREEE Q YR+ KR++ +G
Sbjct: 283 IRMKACCTCSQPTTEESISPNLSLRIAVQAYRREEESQFYRSPKRRRERFDQG 335
Score = 143 bits (361), Expect(2) = 3e-79
Identities = 70/91 (76%), Positives = 79/91 (86%), Gaps = 1/91 (1%)
Frame = +1
Query: 1300 YGDISLSDP-RSKGVQFPFSVTDRVIIKGNKRTPQRFVGREAVVTTQCLNGWYVVKTLDN 1476
+GD + +P RS+GVQFPF+V DRVIIKGNKRTPQRFVGREA+VTTQCLNGWYVVKTLDN
Sbjct: 337 FGDSVVMEPSRSRGVQFPFAVMDRVIIKGNKRTPQRFVGREAIVTTQCLNGWYVVKTLDN 396
Query: 1477 AESVKLQYRSLAKVSDEVTTKPLSTKMMPNW 1569
AESVKLQYRSLAKV D+ + S+KM PNW
Sbjct: 397 AESVKLQYRSLAKVMDDPSKPAASSKMPPNW 427