BLASTX nr result

ID: Bupleurum21_contig00016429 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016429
         (478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527423.1| multidrug resistance-associated protein 1, 3...   209   1e-52
ref|XP_002327533.1| multidrug resistance protein ABC transporter...   206   2e-51
ref|XP_002276212.2| PREDICTED: ABC transporter C family member 8...   199   2e-49
ref|XP_004155974.1| PREDICTED: LOW QUALITY PROTEIN: ABC transpor...   197   7e-49
ref|XP_004141803.1| PREDICTED: ABC transporter C family member 8...   197   7e-49

>ref|XP_002527423.1| multidrug resistance-associated protein 1, 3 (mrp1, 3),
           abc-transoprter, putative [Ricinus communis]
           gi|223533233|gb|EEF34989.1| multidrug
           resistance-associated protein 1, 3 (mrp1, 3),
           abc-transoprter, putative [Ricinus communis]
          Length = 1475

 Score =  209 bits (533), Expect = 1e-52
 Identities = 105/158 (66%), Positives = 127/158 (80%), Gaps = 1/158 (0%)
 Frame = -3

Query: 476 KKVYGTLLYWMSPTIVSSVVFIGCALFKSVSFNAGTIFTILAALRTMAEPVRMIPEALSM 297
           KK YGT+LYW+SPTI+SSVVF+GCALF+S   N+ TIFT+LA LR+MAEPVRMIPEALS+
Sbjct: 510 KKTYGTILYWLSPTIISSVVFVGCALFRSAPLNSSTIFTVLATLRSMAEPVRMIPEALSI 569

Query: 296 LIQVKVSFDRINSFLLDDDLIRID-NTKKSWDSQICTRILNGDFSWDPDSGSLTLSNINL 120
           LIQVKVSFDRIN+FLLDD+L     +T  S++S     +  G FSWDP+    TL  +NL
Sbjct: 570 LIQVKVSFDRINNFLLDDELKNESISTNSSYNSGESITVEGGKFSWDPELSMPTLREVNL 629

Query: 119 EVERRNKVAVCGPVGAGKSSLLYALLGEISKISGTVDV 6
           +++R  K AVCGPVGAGKSSLLYA+LGEI KISGTV+V
Sbjct: 630 DIKRGQKFAVCGPVGAGKSSLLYAMLGEIPKISGTVNV 667


>ref|XP_002327533.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222836087|gb|EEE74508.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1253

 Score =  206 bits (524), Expect = 2e-51
 Identities = 107/159 (67%), Positives = 125/159 (78%), Gaps = 2/159 (1%)
 Frame = -3

Query: 476 KKVYGTLLYWMSPTIVSSVVFIGCALFKSVSFNAGTIFTILAALRTMAEPVRMIPEALSM 297
           KK YGTL+YWMSPTI+SSVVF+GCALF S   NA TIFT+LA LR M EPVRMIPEALS+
Sbjct: 316 KKAYGTLMYWMSPTIISSVVFLGCALFGSAPLNASTIFTVLATLRGMGEPVRMIPEALSV 375

Query: 296 LIQVKVSFDRINSFLLDDDLIRIDNTKK--SWDSQICTRILNGDFSWDPDSGSLTLSNIN 123
           +IQVKVSFDRIN+FLLDD+L + DN KK  + +S     I  G FSWDP+    TL  +N
Sbjct: 376 MIQVKVSFDRINNFLLDDEL-KDDNIKKTQTLNSDRSVTIQEGKFSWDPELNMPTLREVN 434

Query: 122 LEVERRNKVAVCGPVGAGKSSLLYALLGEISKISGTVDV 6
           L+V+   K+AVCGPVGAGKSSLLYA+LGEI K+S TVDV
Sbjct: 435 LDVKSGQKIAVCGPVGAGKSSLLYAILGEIPKLSETVDV 473


>ref|XP_002276212.2| PREDICTED: ABC transporter C family member 8-like [Vitis vinifera]
          Length = 1469

 Score =  199 bits (506), Expect = 2e-49
 Identities = 103/158 (65%), Positives = 124/158 (78%), Gaps = 1/158 (0%)
 Frame = -3

Query: 476 KKVYGTLLYWMSPTIVSSVVFIGCALFKSVSFNAGTIFTILAALRTMAEPVRMIPEALSM 297
           KK Y T+LYW+SPTI+SSV+F+GCAL      NA TIFTILAALR M EPVRMIPEALS 
Sbjct: 504 KKCYNTVLYWLSPTIISSVIFVGCALL-GAPLNASTIFTILAALRCMGEPVRMIPEALSA 562

Query: 296 LIQVKVSFDRINSFLLDDDLIRIDNTKKSW-DSQICTRILNGDFSWDPDSGSLTLSNINL 120
           LIQVKVSFDR+N+FLLDD+L   +    +W +S    +I  G FSW+P+S  LTL  +NL
Sbjct: 563 LIQVKVSFDRLNAFLLDDELKSEEIRHVTWPNSGHSVKINAGKFSWEPESAILTLREVNL 622

Query: 119 EVERRNKVAVCGPVGAGKSSLLYALLGEISKISGTVDV 6
            V+R +K+A+CGPVGAGKSSLL+A+LGEI KISGTVDV
Sbjct: 623 TVQRGHKIAICGPVGAGKSSLLHAILGEIPKISGTVDV 660


>ref|XP_004155974.1| PREDICTED: LOW QUALITY PROTEIN: ABC transporter C family member
           8-like [Cucumis sativus]
          Length = 1270

 Score =  197 bits (501), Expect = 7e-49
 Identities = 100/157 (63%), Positives = 124/157 (78%)
 Frame = -3

Query: 476 KKVYGTLLYWMSPTIVSSVVFIGCALFKSVSFNAGTIFTILAALRTMAEPVRMIPEALSM 297
           KK  G+LLYWM+PTIVS+VVF GC LF+S   NA TIFT+LA LR M+EPVRMIPEALS+
Sbjct: 318 KKADGSLLYWMAPTIVSAVVFFGCVLFQSAPLNASTIFTVLATLRMMSEPVRMIPEALSI 377

Query: 296 LIQVKVSFDRINSFLLDDDLIRIDNTKKSWDSQICTRILNGDFSWDPDSGSLTLSNINLE 117
           LIQVKVSFDR+N+FLLDD+L + D   ++        I NG+F WDP+S  LTL +++L+
Sbjct: 378 LIQVKVSFDRLNAFLLDDEL-KNDEVIENPSMDKMIEIHNGNFRWDPESVILTLKDVDLD 436

Query: 116 VERRNKVAVCGPVGAGKSSLLYALLGEISKISGTVDV 6
           VER  KVA+CGPVGAGKSSLL+A+LGEI K++G V V
Sbjct: 437 VERGQKVAICGPVGAGKSSLLHAILGEIPKLTGNVQV 473


>ref|XP_004141803.1| PREDICTED: ABC transporter C family member 8-like [Cucumis sativus]
          Length = 1270

 Score =  197 bits (501), Expect = 7e-49
 Identities = 100/157 (63%), Positives = 124/157 (78%)
 Frame = -3

Query: 476 KKVYGTLLYWMSPTIVSSVVFIGCALFKSVSFNAGTIFTILAALRTMAEPVRMIPEALSM 297
           KK  G+LLYWM+PTIVS+VVF GC LF+S   NA TIFT+LA LR M+EPVRMIPEALS+
Sbjct: 318 KKADGSLLYWMAPTIVSAVVFFGCVLFQSAPLNASTIFTVLATLRMMSEPVRMIPEALSI 377

Query: 296 LIQVKVSFDRINSFLLDDDLIRIDNTKKSWDSQICTRILNGDFSWDPDSGSLTLSNINLE 117
           LIQVKVSFDR+N+FLLDD+L + D   ++        I NG+F WDP+S  LTL +++L+
Sbjct: 378 LIQVKVSFDRLNAFLLDDEL-KNDEVIENPSMDKMIEIHNGNFRWDPESVILTLKDVDLD 436

Query: 116 VERRNKVAVCGPVGAGKSSLLYALLGEISKISGTVDV 6
           VER  KVA+CGPVGAGKSSLL+A+LGEI K++G V V
Sbjct: 437 VERGQKVAICGPVGAGKSSLLHAILGEIPKLTGNVQV 473


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