BLASTX nr result

ID: Bupleurum21_contig00016424 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016424
         (862 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516134.1| conserved hypothetical protein [Ricinus comm...   177   3e-42
ref|XP_002309467.1| f-box family protein [Populus trichocarpa] g...   171   2e-40
ref|XP_002279983.2| PREDICTED: F-box/LRR-repeat protein 15-like ...   166   6e-39
emb|CBI20722.3| unnamed protein product [Vitis vinifera]              166   6e-39
ref|XP_004169414.1| PREDICTED: F-box/LRR-repeat protein 15-like,...   165   1e-38

>ref|XP_002516134.1| conserved hypothetical protein [Ricinus communis]
           gi|223544620|gb|EEF46136.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 997

 Score =  177 bits (449), Expect = 3e-42
 Identities = 102/232 (43%), Positives = 131/232 (56%), Gaps = 11/232 (4%)
 Frame = -2

Query: 663 GMDAVLAGDSLRGFRDTVESLSSNSVQGVTGVNLNLALGGEPXXXXXSAMKNESLDHDSH 484
           G+D  +      G R + +    +S+   +  ++ ++ G        +   NE+ D D H
Sbjct: 56  GLDDEVVALRKNGIRGSWQVQGESSISNSSSCSVAVSAGA-----VVTGSGNETCDRDMH 110

Query: 483 NKRPKVHSLS--------LDWDSQFPSVSSDNDSYDFLERAYNINQGS---LKNEFHYLF 337
           NKR KV+S S        +  D+  PS SSD D        +N+NQ S    +NE  Y  
Sbjct: 111 NKRAKVYSASRACHYMTAMSSDAGNPSSSSDRD--------FNLNQSSSVPARNEIFYHN 162

Query: 336 PILKDGGFEKVIVSSSARDNRDICNNPHMNDMEVRMDLTDDLLHMVFSFLDHINLCRAAK 157
            +  +   E    S   RD+ D        D+EVRMDLTDDLLHMVFSFLDH+NLCRAA 
Sbjct: 163 FMWNNSSEENPCDSGGGRDDGDESGTSKSEDLEVRMDLTDDLLHMVFSFLDHLNLCRAAM 222

Query: 156 VCRQWRSASAHEDFWTFLNFENQNISFLQFEDMCRRYPKATQLNINGTPAIH 1
           VCRQWR+ASAHEDFW  LNFEN+NIS  QF+DMCRRYP AT++NI   P IH
Sbjct: 223 VCRQWRAASAHEDFWRCLNFENRNISIEQFDDMCRRYPNATEVNIYSAPNIH 274


>ref|XP_002309467.1| f-box family protein [Populus trichocarpa]
           gi|222855443|gb|EEE92990.1| f-box family protein
           [Populus trichocarpa]
          Length = 895

 Score =  171 bits (433), Expect = 2e-40
 Identities = 93/173 (53%), Positives = 108/173 (62%), Gaps = 3/173 (1%)
 Frame = -2

Query: 510 NESLDHDSHNKRPKVHSLSLDWDSQFPSVSSDNDSYDFLERAYNINQGSL---KNEFHYL 340
           N   D DSHNKR KV+S S D        S   +S    +R   ++Q S     NE  Y 
Sbjct: 69  NGGCDRDSHNKRAKVYSYSNDCHYAAVMASDAGNSTSSADRHLGLSQSSSIPSNNEIFYH 128

Query: 339 FPILKDGGFEKVIVSSSARDNRDICNNPHMNDMEVRMDLTDDLLHMVFSFLDHINLCRAA 160
             +  +   +    S+ ARD+ D        D+EVRMDLTDDLLHMVFSFLD INLCRAA
Sbjct: 129 NFMWNNNSDDNPFDSNGARDDGDDSGTSKSEDLEVRMDLTDDLLHMVFSFLDPINLCRAA 188

Query: 159 KVCRQWRSASAHEDFWTFLNFENQNISFLQFEDMCRRYPKATQLNINGTPAIH 1
            VCRQWR+ASAHEDFW  LNFEN+NIS  QFEDM RRYP AT++NI G PAIH
Sbjct: 189 MVCRQWRAASAHEDFWRCLNFENRNISVEQFEDMSRRYPNATEVNIYGAPAIH 241


>ref|XP_002279983.2| PREDICTED: F-box/LRR-repeat protein 15-like [Vitis vinifera]
          Length = 922

 Score =  166 bits (420), Expect = 6e-39
 Identities = 89/168 (52%), Positives = 110/168 (65%), Gaps = 4/168 (2%)
 Frame = -2

Query: 492 DSHNKRPKVHSLSLDWDSQFPSVSSD-NDSYDFLERAYNINQGSL--KNEFHYLFPILKD 322
           D H+KR KVHS S        ++  +  +S    +R YN++Q  +   NE   L  +  D
Sbjct: 104 DVHHKRAKVHSYSQGCTYAITAMPLEAGNSSSSTDRDYNVSQSPIPFNNEILRLTSMSND 163

Query: 321 GGFEKVIVSSSARDNR-DICNNPHMNDMEVRMDLTDDLLHMVFSFLDHINLCRAAKVCRQ 145
              E  + S+  RD   D  +   M D+EVRMDLTDDLLHMVFSFLDHINLCRAA VC+Q
Sbjct: 164 SDDENPLDSNDGRDEEGDGFSTSKMEDLEVRMDLTDDLLHMVFSFLDHINLCRAAIVCKQ 223

Query: 144 WRSASAHEDFWTFLNFENQNISFLQFEDMCRRYPKATQLNINGTPAIH 1
           WR+ S+HEDFW  LNFEN+NIS  QFEDMCRRYP AT++NI G P+IH
Sbjct: 224 WRAGSSHEDFWRCLNFENRNISEEQFEDMCRRYPNATEVNIFGAPSIH 271


>emb|CBI20722.3| unnamed protein product [Vitis vinifera]
          Length = 957

 Score =  166 bits (420), Expect = 6e-39
 Identities = 89/168 (52%), Positives = 110/168 (65%), Gaps = 4/168 (2%)
 Frame = -2

Query: 492 DSHNKRPKVHSLSLDWDSQFPSVSSD-NDSYDFLERAYNINQGSL--KNEFHYLFPILKD 322
           D H+KR KVHS S        ++  +  +S    +R YN++Q  +   NE   L  +  D
Sbjct: 70  DVHHKRAKVHSYSQGCTYAITAMPLEAGNSSSSTDRDYNVSQSPIPFNNEILRLTSMSND 129

Query: 321 GGFEKVIVSSSARDNR-DICNNPHMNDMEVRMDLTDDLLHMVFSFLDHINLCRAAKVCRQ 145
              E  + S+  RD   D  +   M D+EVRMDLTDDLLHMVFSFLDHINLCRAA VC+Q
Sbjct: 130 SDDENPLDSNDGRDEEGDGFSTSKMEDLEVRMDLTDDLLHMVFSFLDHINLCRAAIVCKQ 189

Query: 144 WRSASAHEDFWTFLNFENQNISFLQFEDMCRRYPKATQLNINGTPAIH 1
           WR+ S+HEDFW  LNFEN+NIS  QFEDMCRRYP AT++NI G P+IH
Sbjct: 190 WRAGSSHEDFWRCLNFENRNISEEQFEDMCRRYPNATEVNIFGAPSIH 237


>ref|XP_004169414.1| PREDICTED: F-box/LRR-repeat protein 15-like, partial [Cucumis
           sativus]
          Length = 905

 Score =  165 bits (417), Expect = 1e-38
 Identities = 91/176 (51%), Positives = 111/176 (63%), Gaps = 7/176 (3%)
 Frame = -2

Query: 507 ESLDHDSHNKRPKVHSLSLDWDSQFP---SVSSDNDSYDFLERAYNINQGSLKNEFHYLF 337
           E  D D+H+KR KVHS  ++     P      +    YDF+  + +I     +NEF Y  
Sbjct: 149 EERDRDAHHKRAKVHSKFIESSFATPWPLGAGNPMREYDFIHGSPSIMS---RNEFLYHA 205

Query: 336 PILKDGGFEKVIVSSSARDN----RDICNNPHMNDMEVRMDLTDDLLHMVFSFLDHINLC 169
                   +K + SS  RD+     D C +      EVRMDLTDDLLHMVFSFLDHINLC
Sbjct: 206 STSSRFDADKDLESSFGRDDGINENDTCKS---EGFEVRMDLTDDLLHMVFSFLDHINLC 262

Query: 168 RAAKVCRQWRSASAHEDFWTFLNFENQNISFLQFEDMCRRYPKATQLNINGTPAIH 1
           RAA VCRQW++ASAHEDFW  LNFEN+NIS  QFEDMC RYP AT++NI+G PA+H
Sbjct: 263 RAAIVCRQWQAASAHEDFWRCLNFENKNISMEQFEDMCGRYPNATEVNISGVPAVH 318


Top