BLASTX nr result

ID: Bupleurum21_contig00016419 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016419
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311842.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
ref|XP_002465565.1| hypothetical protein SORBIDRAFT_01g041205 [S...    56   3e-06
gb|AAL75989.1|AF466204_4 putative GAG-POL precursor -orf1 protei...    56   4e-06
ref|XP_002328882.1| predicted protein [Populus trichocarpa] gi|2...    56   4e-06
emb|CAC33017.1| hypothetical protein [Antirrhinum hispanicum]          56   4e-06

>ref|XP_002311842.1| predicted protein [Populus trichocarpa] gi|222851662|gb|EEE89209.1|
           predicted protein [Populus trichocarpa]
          Length = 324

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 32/72 (44%), Positives = 41/72 (56%)
 Frame = +1

Query: 1   LKLRIGTEPRTATHDQKFYVVDVDSPYNMILGRPMLTQFQAVCSLPHLKLKFPTEEGTGV 180
           L + IGT P   T  Q F V+D   PYN I+ RP+L Q   V S  +L +KFPT +   V
Sbjct: 171 LTITIGTAPHYVTLQQTFMVIDTHLPYNAIIRRPLLHQISVVVSTKYLTMKFPTVKVVVV 230

Query: 181 VQGNQVVARTLA 216
           V+GNQ  +R  A
Sbjct: 231 VKGNQEASRECA 242


>ref|XP_002465565.1| hypothetical protein SORBIDRAFT_01g041205 [Sorghum bicolor]
            gi|241919419|gb|EER92563.1| hypothetical protein
            SORBIDRAFT_01g041205 [Sorghum bicolor]
          Length = 1072

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 31/70 (44%), Positives = 38/70 (54%)
 Frame = +1

Query: 1    LKLRIGTEPRTATHDQKFYVVDVDSPYNMILGRPMLTQFQAVCSLPHLKLKFPTEEGTGV 180
            L ++ GT     T    F V D D  Y+ ILGRP LT+F AV    +L LK PTE+G   
Sbjct: 930  LPVQFGTPDHFRTEFVNFVVADFDGTYHAILGRPSLTKFMAVPHYSYLVLKIPTEKGVLT 989

Query: 181  VQGNQVVART 210
            V+GN   A T
Sbjct: 990  VRGNVYTAYT 999


>gb|AAL75989.1|AF466204_4 putative GAG-POL precursor -orf1 protein [Sorghum bicolor]
          Length = 841

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 35/83 (42%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
 Frame = +1

Query: 1   LKLRIGTEPRTATHDQKFYVVDVDSPYNMILGRPMLTQFQAVCSLPHLKLKFPTEEGTGV 180
           L ++ GT     T    F V D D  Y+ ILGRP LT+F AV    +L LK PTE+G   
Sbjct: 699 LPVQFGTPDHFWTEFVNFVVADFDGTYHAILGRPSLTKFMAVPHYSYLVLKMPTEKGVLT 758

Query: 181 VQGNQVVARTLALE--EVHESCD 243
           V+GN   A T   E  +V E+ D
Sbjct: 759 VRGNVYTAYTCEEESFKVTEAID 781


>ref|XP_002328882.1| predicted protein [Populus trichocarpa] gi|222839312|gb|EEE77649.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 29/68 (42%), Positives = 39/68 (57%)
 Frame = +1

Query: 13  IGTEPRTATHDQKFYVVDVDSPYNMILGRPMLTQFQAVCSLPHLKLKFPTEEGTGVVQGN 192
           IG E  T    + F V+    PYN I+GRP+L Q +A  S  +L LKFPT +G   V+ N
Sbjct: 321 IGIEGTTVPVKETFMVIITHHPYNAIIGRPLLHQLRAEVSTKYLTLKFPTSKGIVAVKRN 380

Query: 193 QVVARTLA 216
           Q ++R  A
Sbjct: 381 QEISRECA 388


>emb|CAC33017.1| hypothetical protein [Antirrhinum hispanicum]
          Length = 1455

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
 Frame = +1

Query: 37  THDQKFYVVD-VDSPYNMILGRPMLTQFQAVCSLPHLKLKFPTEEGTGVVQGNQVVARTL 213
           T + +F++++ +   YN+I GRP L  F+AV S+ HLK+KFP   G G V+GNQ  AR  
Sbjct: 563 TKEIRFWIINALAKTYNVICGRPSLCLFEAVPSVLHLKVKFPANNGIGEVKGNQARAREC 622

Query: 214 ALEEVHESCDKEDNIDDDPSRKRK 285
            L  +    +  D  + +P   R+
Sbjct: 623 RLNTMAAIEEGGDINEKNPCEPRR 646


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