BLASTX nr result

ID: Bupleurum21_contig00016390 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016390
         (624 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273594.2| PREDICTED: chloride channel protein CLC-b [V...   313   2e-83
gb|ADK66982.1| chloride channel ClC4 [Vitis vinifera]                 310   1e-82
ref|XP_002300101.1| Cl-channel clc-7 [Populus trichocarpa] gi|22...   309   2e-82
ref|XP_002509531.1| chloride channel clc, putative [Ricinus comm...   301   6e-80
gb|AAD29679.1|AF133209_1 CLC-Nt2 protein [Nicotiana tabacum]          300   1e-79

>ref|XP_002273594.2| PREDICTED: chloride channel protein CLC-b [Vitis vinifera]
            gi|296082356|emb|CBI21361.3| unnamed protein product
            [Vitis vinifera]
          Length = 789

 Score =  313 bits (802), Expect = 2e-83
 Identities = 160/194 (82%), Positives = 169/194 (87%)
 Frame = -3

Query: 622  TFGIAVPSGLFLPIILMGSAYGRILGIAMGDYTKIDQGLFAVLGAASLMAGSMRMTVSLC 443
            TFGIAVPSGLFLPIILMGSAYGR+LGIAMG YTKIDQGL+AVLGAASLMAGSMRMTVSLC
Sbjct: 477  TFGIAVPSGLFLPIILMGSAYGRLLGIAMGSYTKIDQGLYAVLGAASLMAGSMRMTVSLC 536

Query: 442  VIFXXXXXXXXXLPITMFVLLIAKTVGDCFNPSIYDIILDLKGLPFLDAHPEPWMRNITV 263
            VIF         LPITM VLLIAK+VGDC NPSIYDIIL LKGLPFLDA+PEPWMRN+TV
Sbjct: 537  VIFLELTNNLLLLPITMIVLLIAKSVGDCINPSIYDIILHLKGLPFLDANPEPWMRNLTV 596

Query: 262  GELADVKPPVVTLRGIEKVGRIVEVLRNTTHNGFPVVDDREVAVGSLATGERELHGLVLR 83
            GELAD KPPVVTLRG+EKV RIV+VLRNTTHNGFPVVD+  V    LA G  ELHG+VLR
Sbjct: 597  GELADAKPPVVTLRGVEKVARIVDVLRNTTHNGFPVVDEGVVPRVGLAIGATELHGIVLR 656

Query: 82   AHLVLVLKKKWFLQ 41
            AHLV VLKKKWFLQ
Sbjct: 657  AHLVKVLKKKWFLQ 670


>gb|ADK66982.1| chloride channel ClC4 [Vitis vinifera]
          Length = 789

 Score =  310 bits (794), Expect = 1e-82
 Identities = 159/194 (81%), Positives = 168/194 (86%)
 Frame = -3

Query: 622  TFGIAVPSGLFLPIILMGSAYGRILGIAMGDYTKIDQGLFAVLGAASLMAGSMRMTVSLC 443
            TFGIAVPSGLFLPIILMGSAYGR+LGIAMG YTKIDQGL+AVLGAASLMAGSMRMTVSLC
Sbjct: 477  TFGIAVPSGLFLPIILMGSAYGRLLGIAMGSYTKIDQGLYAVLGAASLMAGSMRMTVSLC 536

Query: 442  VIFXXXXXXXXXLPITMFVLLIAKTVGDCFNPSIYDIILDLKGLPFLDAHPEPWMRNITV 263
            VIF         LPITM VLLIAK+VGDC NPSIYDIIL LKGLPFLDA+PEPWMRN+TV
Sbjct: 537  VIFLELTNNLLLLPITMIVLLIAKSVGDCINPSIYDIILHLKGLPFLDANPEPWMRNLTV 596

Query: 262  GELADVKPPVVTLRGIEKVGRIVEVLRNTTHNGFPVVDDREVAVGSLATGERELHGLVLR 83
            GELAD KP VVTLRG+EKV RIV+VLRNTTHNGFPVVD+  V    LA G  ELHG+VLR
Sbjct: 597  GELADAKPQVVTLRGVEKVARIVDVLRNTTHNGFPVVDEGVVPRVGLAIGATELHGIVLR 656

Query: 82   AHLVLVLKKKWFLQ 41
            AHLV VLKKKWFLQ
Sbjct: 657  AHLVKVLKKKWFLQ 670


>ref|XP_002300101.1| Cl-channel clc-7 [Populus trichocarpa] gi|222847359|gb|EEE84906.1|
            Cl-channel clc-7 [Populus trichocarpa]
          Length = 785

 Score =  309 bits (792), Expect = 2e-82
 Identities = 158/193 (81%), Positives = 168/193 (87%)
 Frame = -3

Query: 622  TFGIAVPSGLFLPIILMGSAYGRILGIAMGDYTKIDQGLFAVLGAASLMAGSMRMTVSLC 443
            TFGIAVPSGLFLPIILMGSAYGR+LGIAMG YTKIDQGL+AVLGAASLMAGSMRMTVSLC
Sbjct: 473  TFGIAVPSGLFLPIILMGSAYGRLLGIAMGSYTKIDQGLYAVLGAASLMAGSMRMTVSLC 532

Query: 442  VIFXXXXXXXXXLPITMFVLLIAKTVGDCFNPSIYDIILDLKGLPFLDAHPEPWMRNITV 263
            VIF         LPITM VLLI+KTVGD FNPSIY+IILDLKGLPFLDA+PEPWMRN+TV
Sbjct: 533  VIFLELTNNLLLLPITMIVLLISKTVGDSFNPSIYEIILDLKGLPFLDANPEPWMRNLTV 592

Query: 262  GELADVKPPVVTLRGIEKVGRIVEVLRNTTHNGFPVVDDREVAVGSLATGERELHGLVLR 83
             ELAD KPPVVTL G+EKV RIVEVL NTTHNGFPVVD+  V +  LATG  ELHGL+LR
Sbjct: 593  AELADAKPPVVTLCGVEKVSRIVEVLENTTHNGFPVVDEGVVPLMGLATGATELHGLILR 652

Query: 82   AHLVLVLKKKWFL 44
            AHLV VLKKKWFL
Sbjct: 653  AHLVQVLKKKWFL 665


>ref|XP_002509531.1| chloride channel clc, putative [Ricinus communis]
            gi|223549430|gb|EEF50918.1| chloride channel clc,
            putative [Ricinus communis]
          Length = 787

 Score =  301 bits (771), Expect = 6e-80
 Identities = 151/194 (77%), Positives = 167/194 (86%)
 Frame = -3

Query: 622  TFGIAVPSGLFLPIILMGSAYGRILGIAMGDYTKIDQGLFAVLGAASLMAGSMRMTVSLC 443
            TFGIAVPSGLFLPIILMGSAYGR+LG+AMG YT +DQGL+AVLGAASLMAGSMRMTVSLC
Sbjct: 475  TFGIAVPSGLFLPIILMGSAYGRLLGVAMGSYTNLDQGLYAVLGAASLMAGSMRMTVSLC 534

Query: 442  VIFXXXXXXXXXLPITMFVLLIAKTVGDCFNPSIYDIILDLKGLPFLDAHPEPWMRNITV 263
            VIF         LPITM VLLIAKTVGD FNPSIY+IIL LKGLPFLDA+PEPWMRN+TV
Sbjct: 535  VIFLELTNNLLLLPITMIVLLIAKTVGDSFNPSIYEIILHLKGLPFLDANPEPWMRNLTV 594

Query: 262  GELADVKPPVVTLRGIEKVGRIVEVLRNTTHNGFPVVDDREVAVGSLATGERELHGLVLR 83
            GELAD KPP+VTL G+EKV RIV+VL+NTT+NGFPVVDD  +    LATG  ELHGL+LR
Sbjct: 595  GELADAKPPLVTLCGVEKVSRIVDVLKNTTYNGFPVVDDGVIPPVGLATGATELHGLILR 654

Query: 82   AHLVLVLKKKWFLQ 41
            AHLV  +KKKWFL+
Sbjct: 655  AHLVQAIKKKWFLR 668


>gb|AAD29679.1|AF133209_1 CLC-Nt2 protein [Nicotiana tabacum]
          Length = 786

 Score =  300 bits (768), Expect = 1e-79
 Identities = 154/193 (79%), Positives = 165/193 (85%)
 Frame = -3

Query: 622  TFGIAVPSGLFLPIILMGSAYGRILGIAMGDYTKIDQGLFAVLGAASLMAGSMRMTVSLC 443
            TFGIAVPSGLFLPIILMGSAYGR+L IAMG YTKID GL+AVLGAASLMAGSMRMTVSLC
Sbjct: 474  TFGIAVPSGLFLPIILMGSAYGRLLAIAMGSYTKIDPGLYAVLGAASLMAGSMRMTVSLC 533

Query: 442  VIFXXXXXXXXXLPITMFVLLIAKTVGDCFNPSIYDIILDLKGLPFLDAHPEPWMRNITV 263
            VIF         LPITM VLLIAK+VGDCFN SIY+IIL+LKGLPFLDA+PEPWMRNIT 
Sbjct: 534  VIFLELTNNLLLLPITMLVLLIAKSVGDCFNLSIYEIILELKGLPFLDANPEPWMRNITA 593

Query: 262  GELADVKPPVVTLRGIEKVGRIVEVLRNTTHNGFPVVDDREVAVGSLATGERELHGLVLR 83
            GELADVKPPVVTL G+EKVGRIVE L+NTT+NGFPVVD+  V    L  G  ELHGLVLR
Sbjct: 594  GELADVKPPVVTLCGVEKVGRIVEALKNTTYNGFPVVDEGVVPPVGLPVGATELHGLVLR 653

Query: 82   AHLVLVLKKKWFL 44
             HL+LVLKKKWFL
Sbjct: 654  THLLLVLKKKWFL 666


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