BLASTX nr result

ID: Bupleurum21_contig00016383 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016383
         (561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34744.3| unnamed protein product [Vitis vinifera]              124   1e-26
ref|XP_002282844.1| PREDICTED: F-box protein PP2-A12 [Vitis vini...   124   1e-26
ref|XP_002467631.1| hypothetical protein SORBIDRAFT_01g031190 [S...   120   1e-25
ref|XP_003574219.1| PREDICTED: F-box protein PP2-A13-like [Brach...   120   1e-25
emb|CBI31832.3| unnamed protein product [Vitis vinifera]              118   6e-25

>emb|CBI34744.3| unnamed protein product [Vitis vinifera]
          Length = 309

 Score =  124 bits (311), Expect = 1e-26
 Identities = 55/71 (77%), Positives = 61/71 (85%)
 Frame = -1

Query: 561 VQFQVSTSDGQHATSQCYLREPGSWILYHGGDFIVENPTVPTKVKFSMTQIDCTHTKGGL 382
           V+FQ+ TSDGQHATSQC+L EPG WI YH  DF+V+N   PTK+KFSMTQIDCTHTKGGL
Sbjct: 205 VRFQLWTSDGQHATSQCFLDEPGRWIQYHAADFVVDNSNAPTKIKFSMTQIDCTHTKGGL 264

Query: 381 CVDSVLIYPGE 349
           CVDSVLIYP E
Sbjct: 265 CVDSVLIYPRE 275


>ref|XP_002282844.1| PREDICTED: F-box protein PP2-A12 [Vitis vinifera]
          Length = 283

 Score =  124 bits (311), Expect = 1e-26
 Identities = 55/71 (77%), Positives = 61/71 (85%)
 Frame = -1

Query: 561 VQFQVSTSDGQHATSQCYLREPGSWILYHGGDFIVENPTVPTKVKFSMTQIDCTHTKGGL 382
           V+FQ+ TSDGQHATSQC+L EPG WI YH  DF+V+N   PTK+KFSMTQIDCTHTKGGL
Sbjct: 205 VRFQLWTSDGQHATSQCFLDEPGRWIQYHAADFVVDNSNAPTKIKFSMTQIDCTHTKGGL 264

Query: 381 CVDSVLIYPGE 349
           CVDSVLIYP E
Sbjct: 265 CVDSVLIYPRE 275


>ref|XP_002467631.1| hypothetical protein SORBIDRAFT_01g031190 [Sorghum bicolor]
           gi|241921485|gb|EER94629.1| hypothetical protein
           SORBIDRAFT_01g031190 [Sorghum bicolor]
          Length = 301

 Score =  120 bits (302), Expect = 1e-25
 Identities = 52/69 (75%), Positives = 58/69 (84%)
 Frame = -1

Query: 561 VQFQVSTSDGQHATSQCYLREPGSWILYHGGDFIVENPTVPTKVKFSMTQIDCTHTKGGL 382
           V+FQ+STSDGQ A SQCYL EPGSW+LYH GDF+   P  P K+KFSM QIDCTHTKGGL
Sbjct: 218 VRFQLSTSDGQQALSQCYLEEPGSWVLYHAGDFVASKPDQPMKLKFSMAQIDCTHTKGGL 277

Query: 381 CVDSVLIYP 355
           C+DSVLIYP
Sbjct: 278 CIDSVLIYP 286


>ref|XP_003574219.1| PREDICTED: F-box protein PP2-A13-like [Brachypodium distachyon]
          Length = 301

 Score =  120 bits (301), Expect = 1e-25
 Identities = 52/69 (75%), Positives = 59/69 (85%)
 Frame = -1

Query: 561 VQFQVSTSDGQHATSQCYLREPGSWILYHGGDFIVENPTVPTKVKFSMTQIDCTHTKGGL 382
           V+FQ++TSDGQHA SQCYL EPGSW+LYH GDF+V  P    K+KFSM QIDCTHTKGGL
Sbjct: 215 VRFQLATSDGQHALSQCYLDEPGSWVLYHAGDFVVSKPDQALKLKFSMAQIDCTHTKGGL 274

Query: 381 CVDSVLIYP 355
           CVDSVL+YP
Sbjct: 275 CVDSVLVYP 283


>emb|CBI31832.3| unnamed protein product [Vitis vinifera]
          Length = 231

 Score =  118 bits (296), Expect = 6e-25
 Identities = 53/71 (74%), Positives = 58/71 (81%)
 Frame = -1

Query: 561 VQFQVSTSDGQHATSQCYLREPGSWILYHGGDFIVENPTVPTKVKFSMTQIDCTHTKGGL 382
           V+FQ+STSDGQHA SQCYL EPG W+ YH GDF+VE P    KVKFSMTQIDCTHTKGGL
Sbjct: 153 VRFQLSTSDGQHALSQCYLCEPGKWVHYHAGDFMVEKPNTSMKVKFSMTQIDCTHTKGGL 212

Query: 381 CVDSVLIYPGE 349
           C+DSV I P E
Sbjct: 213 CLDSVFICPAE 223