BLASTX nr result

ID: Bupleurum21_contig00016378 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016378
         (880 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA32827.1| 98b [Daucus carota]                                   319   5e-85
ref|XP_002299486.1| high mobility group family [Populus trichoca...   288   1e-75
ref|XP_002273198.1| PREDICTED: high mobility group B protein 13-...   284   2e-74
ref|XP_004162361.1| PREDICTED: LOW QUALITY PROTEIN: high mobilit...   280   4e-73
ref|XP_004149754.1| PREDICTED: high mobility group B protein 13-...   280   4e-73

>dbj|BAA32827.1| 98b [Daucus carota]
          Length = 502

 Score =  319 bits (818), Expect = 5e-85
 Identities = 174/271 (64%), Positives = 188/271 (69%)
 Frame = -1

Query: 826 PQEASNSFEKEFEEMQKKLQQLTIXXXXXXXXXXXXXXXXXXXXXXXXXRGREQEKLHME 647
           PQE    FEK FEEMQKKL+Q+T+                         RGREQEKL +E
Sbjct: 77  PQEGD--FEKMFEEMQKKLEQMTLEKAKTEEMLKEREEALRRKEEELETRGREQEKLQIE 134

Query: 646 LKKLQKMKEFKPTMTFPLAQSLXXXXXXXXXXXXXXXXXXKRPSPPYVLWMKDQWTEVKK 467
           +KKL KMKEFKPT+ FPL Q+                   K+PSPPY LW+KDQWTEVKK
Sbjct: 135 IKKLGKMKEFKPTVNFPLVQA-PKEKELGKKEKKKVCPEKKKPSPPYALWLKDQWTEVKK 193

Query: 466 ENPEAEFKDISHMLGAKWKTVTAEEKKPYEEKYQVEKEAYLKIIGKEKRENEAMKLLEEE 287
           ENP+AEFK+IS ML AKWKTVTAEEKKPYEEKYQ EKEAYLKI+G EKRENEAMKLLEEE
Sbjct: 194 ENPDAEFKEISTMLAAKWKTVTAEEKKPYEEKYQAEKEAYLKIVGAEKRENEAMKLLEEE 253

Query: 286 QKQRTAMELLEQYMQFXXXXXXXXXXXXXXXXXXXXXXXPVTAFFLFMNERRADLVAEKK 107
           QKQRTAMELLEQYMQF                       PV+AFFLFMNERRADLVAEKK
Sbjct: 254 QKQRTAMELLEQYMQFKEETENDKKKKTKKEKDPLKPKHPVSAFFLFMNERRADLVAEKK 313

Query: 106 NAVEVGKITGEEWKKMTEKEKAPYEEMAKKN 14
           N +EVGKITGEEWK MTEKEKAPYEEMAKKN
Sbjct: 314 NVLEVGKITGEEWKNMTEKEKAPYEEMAKKN 344


>ref|XP_002299486.1| high mobility group family [Populus trichocarpa]
           gi|222846744|gb|EEE84291.1| high mobility group family
           [Populus trichocarpa]
          Length = 498

 Score =  288 bits (737), Expect = 1e-75
 Identities = 155/272 (56%), Positives = 180/272 (66%), Gaps = 2/272 (0%)
 Frame = -1

Query: 823 QEASNSFEKEFEEMQKKLQQLTIXXXXXXXXXXXXXXXXXXXXXXXXXRGREQEKLHMEL 644
           + A++SFEK+F+EMQ+ LQQL +                         +G+EQEK+  EL
Sbjct: 84  EAAASSFEKDFQEMQEMLQQLKLEKEKTEVLLKEKDEMLKAKDEEIEMKGKEQEKMKTEL 143

Query: 643 KKLQKMKEFKPTMTFPLAQSLXXXXXXXXXXXXXXXXXXKRPSPPYVLWMKDQWTEVKKE 464
           KKLQK+KEFKP MT P  Q L                   RP PPY LW KDQW EVKKE
Sbjct: 144 KKLQKLKEFKPIMTLPFVQVLNEKEQDKKKKKGGNEIK--RPCPPYSLWCKDQWNEVKKE 201

Query: 463 NPEAEFKDISHMLGAKWKTVTAEEKKPYEEKYQVEKEAYLKIIGKEKRENEAMKLLEEEQ 284
           NP+AEFKDISH+LGAKWKT+TAEEKKPYEEKYQVEKEAYLK++ KEKRE+EAMKLLEEEQ
Sbjct: 202 NPDAEFKDISHILGAKWKTITAEEKKPYEEKYQVEKEAYLKLMTKEKRESEAMKLLEEEQ 261

Query: 283 KQRTAMELLEQYMQF--XXXXXXXXXXXXXXXXXXXXXXXPVTAFFLFMNERRADLVAEK 110
           KQ+TAMELLEQY+QF                         P++AFFLF NERRA L+AE 
Sbjct: 262 KQKTAMELLEQYLQFKQEAGQEENKKNKTKKEKDPLKPKHPLSAFFLFSNERRAALLAEN 321

Query: 109 KNAVEVGKITGEEWKKMTEKEKAPYEEMAKKN 14
           KN +EV KI GEEWK MTEK+K PYEE+AKKN
Sbjct: 322 KNVLEVAKIAGEEWKNMTEKQKRPYEEIAKKN 353


>ref|XP_002273198.1| PREDICTED: high mobility group B protein 13-like [Vitis vinifera]
          Length = 505

 Score =  284 bits (726), Expect = 2e-74
 Identities = 153/267 (57%), Positives = 179/267 (67%)
 Frame = -1

Query: 814 SNSFEKEFEEMQKKLQQLTIXXXXXXXXXXXXXXXXXXXXXXXXXRGREQEKLHMELKKL 635
           S SFE++ +EMQ+KL+QL +                         RGREQEKL MELKKL
Sbjct: 86  SQSFERDLQEMQEKLEQLRLEKEKTEELLKARDEMLKIKEEELETRGREQEKLQMELKKL 145

Query: 634 QKMKEFKPTMTFPLAQSLXXXXXXXXXXXXXXXXXXKRPSPPYVLWMKDQWTEVKKENPE 455
           QK+KEFKPT+TFPL  SL                  KRPSP YVLW KDQW E KK NP+
Sbjct: 146 QKLKEFKPTVTFPL-HSLRDKEQEKKEKNKKGCPETKRPSPSYVLWCKDQWNEAKKANPD 204

Query: 454 AEFKDISHMLGAKWKTVTAEEKKPYEEKYQVEKEAYLKIIGKEKRENEAMKLLEEEQKQR 275
           A+FK+IS++LGAKWKT++AEEKKPYEEKYQ EKEAYL+I+GKEKRENEAM+LLEEEQKQ+
Sbjct: 205 ADFKEISNILGAKWKTISAEEKKPYEEKYQAEKEAYLQIVGKEKRENEAMRLLEEEQKQK 264

Query: 274 TAMELLEQYMQFXXXXXXXXXXXXXXXXXXXXXXXPVTAFFLFMNERRADLVAEKKNAVE 95
           TAMELLEQY+QF                       PV+AFFLF  ERRA L+ E KN +E
Sbjct: 265 TAMELLEQYLQF-KQGAEKENKKKKKEKDPLKPKHPVSAFFLFSKERRAALLGEDKNVLE 323

Query: 94  VGKITGEEWKKMTEKEKAPYEEMAKKN 14
           + KI GEEWK MTEK+K PYEE+AKKN
Sbjct: 324 IAKIAGEEWKNMTEKQKRPYEEIAKKN 350


>ref|XP_004162361.1| PREDICTED: LOW QUALITY PROTEIN: high mobility group B protein
           13-like [Cucumis sativus]
          Length = 500

 Score =  280 bits (715), Expect = 4e-73
 Identities = 149/270 (55%), Positives = 176/270 (65%)
 Frame = -1

Query: 823 QEASNSFEKEFEEMQKKLQQLTIXXXXXXXXXXXXXXXXXXXXXXXXXRGREQEKLHMEL 644
           Q A+ SF+K+ +EMQ  LQQL +                         R +EQEKL +EL
Sbjct: 76  QPANQSFDKDLQEMQDMLQQLKLDKEKTEELLKEKDEMLKQKDEELKTRDKEQEKLQIEL 135

Query: 643 KKLQKMKEFKPTMTFPLAQSLXXXXXXXXXXXXXXXXXXKRPSPPYVLWMKDQWTEVKKE 464
           KKLQK+KEFKPTM FP+ Q                     RP+PPY+LW KDQW E+KKE
Sbjct: 136 KKLQKLKEFKPTMNFPMIQIFKDKEQDKKEKKKCAEKK--RPAPPYILWCKDQWNEIKKE 193

Query: 463 NPEAEFKDISHMLGAKWKTVTAEEKKPYEEKYQVEKEAYLKIIGKEKRENEAMKLLEEEQ 284
           NPEA+FK+ S++LGAKWKT++AEEKKPYEEKYQ EKE YL+I  KEKRE+EAMKLLEEEQ
Sbjct: 194 NPEADFKETSNILGAKWKTISAEEKKPYEEKYQAEKETYLRITSKEKRESEAMKLLEEEQ 253

Query: 283 KQRTAMELLEQYMQFXXXXXXXXXXXXXXXXXXXXXXXPVTAFFLFMNERRADLVAEKKN 104
           KQ+TAMELLEQY+QF                       P++AFFLF NERRA LVAE KN
Sbjct: 254 KQKTAMELLEQYLQF-KEEAEKENKKKKKEKDPLKPKQPMSAFFLFSNERRASLVAENKN 312

Query: 103 AVEVGKITGEEWKKMTEKEKAPYEEMAKKN 14
            VE+ KI GEEWK MTE++K PYEEMAKKN
Sbjct: 313 VVELAKIAGEEWKNMTEEQKGPYEEMAKKN 342


>ref|XP_004149754.1| PREDICTED: high mobility group B protein 13-like [Cucumis sativus]
          Length = 500

 Score =  280 bits (715), Expect = 4e-73
 Identities = 149/270 (55%), Positives = 176/270 (65%)
 Frame = -1

Query: 823 QEASNSFEKEFEEMQKKLQQLTIXXXXXXXXXXXXXXXXXXXXXXXXXRGREQEKLHMEL 644
           Q A+ SF+K+ +EMQ  LQQL +                         R +EQEKL +EL
Sbjct: 76  QPANQSFDKDLQEMQDMLQQLKLDKEKTEELLKEKDEMLKQKDEELKTRDKEQEKLQIEL 135

Query: 643 KKLQKMKEFKPTMTFPLAQSLXXXXXXXXXXXXXXXXXXKRPSPPYVLWMKDQWTEVKKE 464
           KKLQK+KEFKPTM FP+ Q                     RP+PPY+LW KDQW E+KKE
Sbjct: 136 KKLQKLKEFKPTMNFPMIQIFKDKEQDKKEKKKCAEKK--RPAPPYILWCKDQWNEIKKE 193

Query: 463 NPEAEFKDISHMLGAKWKTVTAEEKKPYEEKYQVEKEAYLKIIGKEKRENEAMKLLEEEQ 284
           NPEA+FK+ S++LGAKWKT++AEEKKPYEEKYQ EKE YL+I  KEKRE+EAMKLLEEEQ
Sbjct: 194 NPEADFKETSNILGAKWKTISAEEKKPYEEKYQAEKETYLRITSKEKRESEAMKLLEEEQ 253

Query: 283 KQRTAMELLEQYMQFXXXXXXXXXXXXXXXXXXXXXXXPVTAFFLFMNERRADLVAEKKN 104
           KQ+TAMELLEQY+QF                       P++AFFLF NERRA LVAE KN
Sbjct: 254 KQKTAMELLEQYLQF-KEEAEKENKKKKKEKDPLKPKQPMSAFFLFSNERRASLVAENKN 312

Query: 103 AVEVGKITGEEWKKMTEKEKAPYEEMAKKN 14
            VE+ KI GEEWK MTE++K PYEEMAKKN
Sbjct: 313 VVELAKIAGEEWKNMTEEQKGPYEEMAKKN 342