BLASTX nr result

ID: Bupleurum21_contig00016374 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016374
         (699 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521114.1| conserved hypothetical protein [Ricinus comm...   163   3e-38
ref|XP_002265748.1| PREDICTED: uncharacterized protein LOC100252...   160   3e-37
emb|CAN74743.1| hypothetical protein VITISV_025585 [Vitis vinifera]   159   4e-37
ref|XP_002301774.1| predicted protein [Populus trichocarpa] gi|2...   156   3e-36
ref|XP_002339460.1| predicted protein [Populus trichocarpa] gi|2...   154   2e-35

>ref|XP_002521114.1| conserved hypothetical protein [Ricinus communis]
           gi|223539683|gb|EEF41265.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 291

 Score =  163 bits (413), Expect = 3e-38
 Identities = 84/134 (62%), Positives = 104/134 (77%), Gaps = 5/134 (3%)
 Frame = -3

Query: 697 YMQKSNYMAAEMIYKKAYMIYPDANKACNLSFCLMKRARYNEARAILQDIETGTTPGADD 518
           YMQKSN+MAAE++YKKA MI PDANKA NL FCL+++ARY+EAR ILQ++  G  PG++D
Sbjct: 161 YMQKSNFMAAEVVYKKAQMIDPDANKAYNLGFCLIRQARYDEARQILQNVLEGRFPGSND 220

Query: 517 PRTRTRAQELQTELELNQTRLPPTEL-----FNFDLDQDFVDGLERMMNAWAPSRSRRLP 353
            ++R RAQEL  E+E   ++LPP EL      N D D DFV G+E+MMN WAPSR +RLP
Sbjct: 221 CKSRKRAQELLMEME---SKLPPPELTNRIGINVDGDDDFVKGIEQMMNKWAPSRPKRLP 277

Query: 352 IFEEISTSRDQLAC 311
           IFEEIS+ RDQLAC
Sbjct: 278 IFEEISSLRDQLAC 291


>ref|XP_002265748.1| PREDICTED: uncharacterized protein LOC100252818 [Vitis vinifera]
           gi|297744303|emb|CBI37273.3| unnamed protein product
           [Vitis vinifera]
          Length = 297

 Score =  160 bits (404), Expect = 3e-37
 Identities = 78/132 (59%), Positives = 104/132 (78%), Gaps = 3/132 (2%)
 Frame = -3

Query: 697 YMQKSNYMAAEMIYKKAYMIYPDANKACNLSFCLMKRARYNEARAILQDIETGTTPGADD 518
           YMQKSNYMAAE++YKKA MI PDANKACNL+ CL+K+AR +EAR+IL ++  G  PG++D
Sbjct: 168 YMQKSNYMAAEVVYKKAQMIDPDANKACNLALCLIKQARNSEARSILNEVLQGNIPGSED 227

Query: 517 PRTRTRAQELQTELELNQTRLPPT---ELFNFDLDQDFVDGLERMMNAWAPSRSRRLPIF 347
            + + RAQEL  E+E     LPP+   ++  FDL+ D +DGLE+++N WAPSR++RLPIF
Sbjct: 228 CKAQNRAQELMVEVE--PRWLPPSTKMKIARFDLEDDLIDGLEKLLNEWAPSRTKRLPIF 285

Query: 346 EEISTSRDQLAC 311
           EEIS+ R+QLAC
Sbjct: 286 EEISSYRNQLAC 297


>emb|CAN74743.1| hypothetical protein VITISV_025585 [Vitis vinifera]
          Length = 297

 Score =  159 bits (403), Expect = 4e-37
 Identities = 78/132 (59%), Positives = 104/132 (78%), Gaps = 3/132 (2%)
 Frame = -3

Query: 697 YMQKSNYMAAEMIYKKAYMIYPDANKACNLSFCLMKRARYNEARAILQDIETGTTPGADD 518
           YMQKSNYMAAE++YKKA MI PDANKACNL+ CL+K+AR +EAR+IL ++  G  PG++D
Sbjct: 168 YMQKSNYMAAEVVYKKAQMIDPDANKACNLALCLIKQARNSEARSILNEVLQGNIPGSED 227

Query: 517 PRTRTRAQELQTELELNQTRLPPT---ELFNFDLDQDFVDGLERMMNAWAPSRSRRLPIF 347
            + + RAQEL   LE+    LPP+   ++  FDL+ D +DGLE+++N WAPSR++RLPIF
Sbjct: 228 CKAQNRAQELM--LEVEPRWLPPSTKMKIARFDLEDDLIDGLEKLLNEWAPSRTKRLPIF 285

Query: 346 EEISTSRDQLAC 311
           EEIS+ R+QLAC
Sbjct: 286 EEISSYRNQLAC 297


>ref|XP_002301774.1| predicted protein [Populus trichocarpa] gi|222843500|gb|EEE81047.1|
           predicted protein [Populus trichocarpa]
          Length = 309

 Score =  156 bits (395), Expect = 3e-36
 Identities = 75/131 (57%), Positives = 102/131 (77%), Gaps = 2/131 (1%)
 Frame = -3

Query: 697 YMQKSNYMAAEMIYKKAYMIYPDANKACNLSFCLMKRARYNEARAILQDIETGTTPGADD 518
           YMQK N++AAE++Y+KA MI PDANKACNL+ CL+K+ARY+EAR++L D+  G  PG+ D
Sbjct: 179 YMQKPNFIAAEVVYQKAQMIDPDANKACNLALCLIKQARYDEARSVLLDVSQGRLPGSGD 238

Query: 517 PRTRTRAQELQTELELNQTRLPPTEL--FNFDLDQDFVDGLERMMNAWAPSRSRRLPIFE 344
            ++R+RA+EL  E++  +T    T++  FN D D DFV GLE++M+ WAPSRS+RLPIFE
Sbjct: 239 VKSRSRAEELLMEVKSRETPDELTDMLGFNLDEDDDFVKGLEKLMSEWAPSRSKRLPIFE 298

Query: 343 EISTSRDQLAC 311
           EIS+ RD L C
Sbjct: 299 EISSFRDPLTC 309


>ref|XP_002339460.1| predicted protein [Populus trichocarpa] gi|222875155|gb|EEF12286.1|
           predicted protein [Populus trichocarpa]
          Length = 130

 Score =  154 bits (388), Expect = 2e-35
 Identities = 74/130 (56%), Positives = 101/130 (77%), Gaps = 2/130 (1%)
 Frame = -3

Query: 694 MQKSNYMAAEMIYKKAYMIYPDANKACNLSFCLMKRARYNEARAILQDIETGTTPGADDP 515
           MQK N++AAE++Y+KA MI PDANKACNL+ CL+K+ARY+EAR++L D+  G  PG+ D 
Sbjct: 1   MQKPNFIAAEVVYQKAQMIDPDANKACNLALCLIKQARYDEARSVLLDVSQGRLPGSGDV 60

Query: 514 RTRTRAQELQTELELNQTRLPPTEL--FNFDLDQDFVDGLERMMNAWAPSRSRRLPIFEE 341
           ++R+RA+EL  E++  +T    T++  FN D D DFV GLE++M+ WAPSRS+RLPIFEE
Sbjct: 61  KSRSRAEELLMEVKSRETPDELTDMLGFNLDEDDDFVKGLEKLMSEWAPSRSKRLPIFEE 120

Query: 340 ISTSRDQLAC 311
           IS+ RD L C
Sbjct: 121 ISSFRDPLTC 130


Top