BLASTX nr result

ID: Bupleurum21_contig00016370 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016370
         (667 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37438.3| unnamed protein product [Vitis vinifera]              117   2e-24
ref|XP_002270743.1| PREDICTED: uncharacterized protein LOC100243...   117   2e-24
emb|CBI15401.3| unnamed protein product [Vitis vinifera]              105   1e-20
ref|XP_002275093.1| PREDICTED: uncharacterized protein LOC100259...   105   1e-20
gb|AAF69709.1|AC016041_14 F27J15.26 [Arabidopsis thaliana] gi|11...   101   1e-19

>emb|CBI37438.3| unnamed protein product [Vitis vinifera]
          Length = 465

 Score =  117 bits (294), Expect = 2e-24
 Identities = 62/122 (50%), Positives = 73/122 (59%), Gaps = 12/122 (9%)
 Frame = +3

Query: 54  CSKDGQGMETRLESPNSNRSK------------GLDIKKTPVLKRMEFDPIRQHRHFCPW 197
           CS     ++ +L S   N  K              D K+ P+ K MEFDPIRQHRHFCPW
Sbjct: 340 CSDAQNNLDMQLNSHGGNVDKDRGQKEGFACGIAKDPKQLPLDKAMEFDPIRQHRHFCPW 399

Query: 198 ITSSGSSPPGWKQTLSALQRQKEFXXXXXXXXXXXXVLEVDDPVASIKKLFTSPSPKRAK 377
           I S+GS+ PGWKQTLSALQR KEF            ++EVDDP+ASI+KLF SPS KR K
Sbjct: 400 IASAGSAAPGWKQTLSALQRGKEFSPYSPSKLPSLSMIEVDDPIASIRKLFASPSAKRMK 459

Query: 378 RT 383
            T
Sbjct: 460 LT 461


>ref|XP_002270743.1| PREDICTED: uncharacterized protein LOC100243076 [Vitis vinifera]
          Length = 869

 Score =  117 bits (294), Expect = 2e-24
 Identities = 62/122 (50%), Positives = 73/122 (59%), Gaps = 12/122 (9%)
 Frame = +3

Query: 54   CSKDGQGMETRLESPNSNRSK------------GLDIKKTPVLKRMEFDPIRQHRHFCPW 197
            CS     ++ +L S   N  K              D K+ P+ K MEFDPIRQHRHFCPW
Sbjct: 744  CSDAQNNLDMQLNSHGGNVDKDRGQKEGFACGIAKDPKQLPLDKAMEFDPIRQHRHFCPW 803

Query: 198  ITSSGSSPPGWKQTLSALQRQKEFXXXXXXXXXXXXVLEVDDPVASIKKLFTSPSPKRAK 377
            I S+GS+ PGWKQTLSALQR KEF            ++EVDDP+ASI+KLF SPS KR K
Sbjct: 804  IASAGSAAPGWKQTLSALQRGKEFSPYSPSKLPSLSMIEVDDPIASIRKLFASPSAKRMK 863

Query: 378  RT 383
             T
Sbjct: 864  LT 865


>emb|CBI15401.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  105 bits (261), Expect = 1e-20
 Identities = 48/87 (55%), Positives = 64/87 (73%)
 Frame = +3

Query: 123 DIKKTPVLKRMEFDPIRQHRHFCPWITSSGSSPPGWKQTLSALQRQKEFXXXXXXXXXXX 302
           D+K+ P+ K MEFDPI QHRHFCPWI ++G + PGW+QTLSALQ+QK+F           
Sbjct: 563 DLKQQPIDKAMEFDPIWQHRHFCPWIAAAGGAAPGWQQTLSALQQQKDF-----SHPSPS 617

Query: 303 XVLEVDDPVASIKKLFTSPSPKRAKRT 383
            +++VDDP+AS++K+F S S KR KRT
Sbjct: 618 NMIKVDDPIASVRKIFMSSSEKRMKRT 644


>ref|XP_002275093.1| PREDICTED: uncharacterized protein LOC100259364 [Vitis vinifera]
          Length = 846

 Score =  105 bits (261), Expect = 1e-20
 Identities = 48/87 (55%), Positives = 64/87 (73%)
 Frame = +3

Query: 123  DIKKTPVLKRMEFDPIRQHRHFCPWITSSGSSPPGWKQTLSALQRQKEFXXXXXXXXXXX 302
            D+K+ P+ K MEFDPI QHRHFCPWI ++G + PGW+QTLSALQ+QK+F           
Sbjct: 761  DLKQQPIDKAMEFDPIWQHRHFCPWIAAAGGAAPGWQQTLSALQQQKDF-----SHPSPS 815

Query: 303  XVLEVDDPVASIKKLFTSPSPKRAKRT 383
             +++VDDP+AS++K+F S S KR KRT
Sbjct: 816  NMIKVDDPIASVRKIFMSSSEKRMKRT 842


>gb|AAF69709.1|AC016041_14 F27J15.26 [Arabidopsis thaliana]
           gi|11094814|gb|AAG29743.1|AC084414_11 unknown protein
           [Arabidopsis thaliana]
          Length = 608

 Score =  101 bits (251), Expect = 1e-19
 Identities = 55/121 (45%), Positives = 74/121 (61%), Gaps = 4/121 (3%)
 Frame = +3

Query: 27  RNTTNNE---IVCSKDGQGMETRLESPNSNRSKGLDIKKTPVL-KRMEFDPIRQHRHFCP 194
           RN+T+ E    + +KD Q M  R   P +N+ +    +K+    K+MEFDPI+QHRHFCP
Sbjct: 484 RNSTDVESDIALQNKDKQMMVVRSNLPENNKPRDSTAEKSATSNKQMEFDPIKQHRHFCP 543

Query: 195 WITSSGSSPPGWKQTLSALQRQKEFXXXXXXXXXXXXVLEVDDPVASIKKLFTSPSPKRA 374
           WI S+G   PGW+QTLSALQR K              + +VDDP+ S++ LF SPSPK+ 
Sbjct: 544 WIWSTGRRGPGWRQTLSALQRHK---GSCQTPPSSSSLFKVDDPLTSVRNLFKSPSPKKR 600

Query: 375 K 377
           K
Sbjct: 601 K 601


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