BLASTX nr result

ID: Bupleurum21_contig00016361 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016361
         (1188 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527405.1| Protein SEY1, putative [Ricinus communis] gi...   362   1e-97
ref|XP_003531616.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 hom...   350   3e-94
ref|XP_003529864.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 hom...   346   6e-93
ref|XP_002279673.2| PREDICTED: protein ROOT HAIR DEFECTIVE 3 hom...   345   2e-92
emb|CBI35950.3| unnamed protein product [Vitis vinifera]              345   2e-92

>ref|XP_002527405.1| Protein SEY1, putative [Ricinus communis] gi|223533215|gb|EEF34971.1|
            Protein SEY1, putative [Ricinus communis]
          Length = 813

 Score =  362 bits (928), Expect = 1e-97
 Identities = 187/264 (70%), Positives = 217/264 (82%), Gaps = 8/264 (3%)
 Frame = +1

Query: 1    RMKDRFTTLFSHDSDSMPRVWTGKEDIRTITKIARSASLKLLSVMAAIRLDDVADNIENT 180
            RMKDRF+ LFSHDSDSMPRVWTGKEDIR ITK ARSASLKLLSVM AIRLDD  DN+E+T
Sbjct: 545  RMKDRFSMLFSHDSDSMPRVWTGKEDIRAITKTARSASLKLLSVMVAIRLDDEVDNVEST 604

Query: 181  LALALVDTNS------ASKSNNDALASSSWEEVPASKTLITPVQCKSLWRQFKTETEYTV 342
            L+   +DT +       S +  D LASS+W+EVP+SKTLITPVQCKSLWRQFK ETEY+V
Sbjct: 605  LSSVFLDTKNNAAVTERSITKTDPLASSTWDEVPSSKTLITPVQCKSLWRQFKAETEYSV 664

Query: 343  TQAISAQEASKRGNNWLPPPWAIIALLVLGFNEFMTLLRNPLWLLFMFVGYLLAKALWVQ 522
            TQAISAQEA+KR NNWLPPPWAI+AL+VLGFNEFMTLLRNPL+L F+FV +LL KALWVQ
Sbjct: 665  TQAISAQEANKRNNNWLPPPWAIVALVVLGFNEFMTLLRNPLYLGFIFVVFLLVKALWVQ 724

Query: 523  LDVSREFRNGVLPGILALSTKFLPAIMNIMRKLAEQGQGAANNDIQSNPPLAANSF-SGV 699
            LDVS EFRNG LPG+++LSTKFLP IMN+++KLAE+GQ  A ND Q NP LAA SF +GV
Sbjct: 725  LDVSGEFRNGALPGLISLSTKFLPTIMNLIKKLAEEGQKPATNDPQRNPALAAKSFRNGV 784

Query: 700  -NNDLXXXXXXEVTISDNGTEYSS 768
             ++D        VT ++NGTE+SS
Sbjct: 785  GSSDDMSTASSGVTSTENGTEFSS 808


>ref|XP_003531616.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 1-like [Glycine max]
          Length = 808

 Score =  350 bits (899), Expect = 3e-94
 Identities = 183/262 (69%), Positives = 214/262 (81%), Gaps = 6/262 (2%)
 Frame = +1

Query: 1    RMKDRFTTLFSHDSDSMPRVWTGKEDIRTITKIARSASLKLLSVMAAIRLDDV-ADNIEN 177
            RMKDRFT LFSHDSDSMPRVWTGKEDIR ITK ARS+SLKLLSVMAAIRLDD   DNIE 
Sbjct: 545  RMKDRFTMLFSHDSDSMPRVWTGKEDIRAITKTARSSSLKLLSVMAAIRLDDDDTDNIEK 604

Query: 178  TLALALVDTNSASKSNN-----DALASSSWEEVPASKTLITPVQCKSLWRQFKTETEYTV 342
             LA+ALVD++ +S +       D LASSSWE+V +SKTLITPVQCKSLWRQFKTETEY+V
Sbjct: 605  VLAVALVDSSPSSNATRSITMVDPLASSSWEQVSSSKTLITPVQCKSLWRQFKTETEYSV 664

Query: 343  TQAISAQEASKRGNNWLPPPWAIIALLVLGFNEFMTLLRNPLWLLFMFVGYLLAKALWVQ 522
            +QAISAQEA+KR NNWLPPPWAI+AL++LGFNEFMTLLRNPL+L  +FVG+LL KALWVQ
Sbjct: 665  SQAISAQEANKRNNNWLPPPWAIVALVILGFNEFMTLLRNPLYLGVIFVGFLLIKALWVQ 724

Query: 523  LDVSREFRNGVLPGILALSTKFLPAIMNIMRKLAEQGQGAANNDIQSNPPLAANSFSGVN 702
            LDVS EFRNG LPGI++LS+KF+P IMN+MRKLAE+GQ  A N+ Q  P  + NS++   
Sbjct: 725  LDVSGEFRNGALPGIISLSSKFIPTIMNLMRKLAEEGQNPAANNPQRTP--SKNSYND-G 781

Query: 703  NDLXXXXXXEVTISDNGTEYSS 768
            + +       +T  DNGTEY+S
Sbjct: 782  HAVSSSASSNLTALDNGTEYAS 803


>ref|XP_003529864.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 1-like [Glycine max]
          Length = 808

 Score =  346 bits (888), Expect = 6e-93
 Identities = 181/262 (69%), Positives = 210/262 (80%), Gaps = 6/262 (2%)
 Frame = +1

Query: 1    RMKDRFTTLFSHDSDSMPRVWTGKEDIRTITKIARSASLKLLSVMAAIRLDDV-ADNIEN 177
            RMKDRFT LFSHDSDSMPRVWTGKEDIR ITK ARS+SLKLLSVMAAIRLDD   DNIE 
Sbjct: 545  RMKDRFTMLFSHDSDSMPRVWTGKEDIRAITKTARSSSLKLLSVMAAIRLDDDDTDNIEK 604

Query: 178  TLALALVDTNSASKSNN-----DALASSSWEEVPASKTLITPVQCKSLWRQFKTETEYTV 342
             LA+ALVD++  S +       D LASSSWE+V +SKTLITPVQCKSLWRQFKTETEY+V
Sbjct: 605  VLAVALVDSSPNSNATRSMTMVDPLASSSWEQVSSSKTLITPVQCKSLWRQFKTETEYSV 664

Query: 343  TQAISAQEASKRGNNWLPPPWAIIALLVLGFNEFMTLLRNPLWLLFMFVGYLLAKALWVQ 522
            +QAISAQEA+KR NNWLPPPWAI+AL++LGFNEFMTLLRNPL+L  +FVG+LL KALWVQ
Sbjct: 665  SQAISAQEANKRNNNWLPPPWAIVALVILGFNEFMTLLRNPLYLGVIFVGFLLIKALWVQ 724

Query: 523  LDVSREFRNGVLPGILALSTKFLPAIMNIMRKLAEQGQGAANNDIQSNPPLAANSFSGVN 702
            LDVS EFRNG LPGI++LS+KF+P IMN+M+KLAE+GQ  A N+ Q  P   + S     
Sbjct: 725  LDVSGEFRNGALPGIISLSSKFIPTIMNLMKKLAEEGQNPAANNPQRTP---SKSSYNEG 781

Query: 703  NDLXXXXXXEVTISDNGTEYSS 768
            + +       +T  DNGTEY+S
Sbjct: 782  HAVSSSASSNLTRLDNGTEYAS 803


>ref|XP_002279673.2| PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 1-like [Vitis
            vinifera]
          Length = 871

 Score =  345 bits (884), Expect = 2e-92
 Identities = 179/265 (67%), Positives = 214/265 (80%), Gaps = 9/265 (3%)
 Frame = +1

Query: 1    RMKDRFTTLFSHDSDSMPRVWTGKEDIRTITKIARSASLKLLSVMAAIRLDDVADNIENT 180
            RMKDRF TLFSHDSDSMPRVWTGKEDIR ITK ARS+SLKLLSVMAAIRLDD  DNIENT
Sbjct: 603  RMKDRFATLFSHDSDSMPRVWTGKEDIRAITKTARSSSLKLLSVMAAIRLDDYTDNIENT 662

Query: 181  LALALVDTNSASKSNN-----DALASSSWEEVPASKTLITPVQCKSLWRQFKTETEYTVT 345
            L+ ALVD   ++ +N      D LASS+WEEVP SKTLITPVQCK+LWRQFK ETEY+VT
Sbjct: 663  LSAALVDNVKSAVTNRSITTVDPLASSTWEEVPPSKTLITPVQCKNLWRQFKMETEYSVT 722

Query: 346  QAISAQEASKRGNNWLPPPWAIIALLVLGFNEFMTLLRNPLWLLFMFVGYLLAKALWVQL 525
            QAI+AQEA+KR NNWLPPPWAI+A++VLGFNEFMTLLRNPL+L  +FV +LL+KALWVQL
Sbjct: 723  QAIAAQEANKRNNNWLPPPWAIVAMVVLGFNEFMTLLRNPLYLGVIFVAFLLSKALWVQL 782

Query: 526  DVSREFRNGVLPGILALSTKFLPAIMNIMRKLAEQGQGAANNDIQSNP-PLAANSFSGVN 702
            D++ EFR+G++PG+L+L+TK LP +MN++RKLAE+G      D + NP P + N  +GVN
Sbjct: 783  DIAGEFRHGIVPGMLSLATKLLPTVMNLLRKLAEEGAKPPTTDTRGNPLPGSKNFRNGVN 842

Query: 703  ND--LXXXXXXEVTISDNGT-EYSS 768
                +      E+T S+NGT EYSS
Sbjct: 843  TSSAVSSSASSEIT-SENGTEEYSS 866


>emb|CBI35950.3| unnamed protein product [Vitis vinifera]
          Length = 1029

 Score =  345 bits (884), Expect = 2e-92
 Identities = 179/265 (67%), Positives = 214/265 (80%), Gaps = 9/265 (3%)
 Frame = +1

Query: 1    RMKDRFTTLFSHDSDSMPRVWTGKEDIRTITKIARSASLKLLSVMAAIRLDDVADNIENT 180
            RMKDRF TLFSHDSDSMPRVWTGKEDIR ITK ARS+SLKLLSVMAAIRLDD  DNIENT
Sbjct: 761  RMKDRFATLFSHDSDSMPRVWTGKEDIRAITKTARSSSLKLLSVMAAIRLDDYTDNIENT 820

Query: 181  LALALVDTNSASKSNN-----DALASSSWEEVPASKTLITPVQCKSLWRQFKTETEYTVT 345
            L+ ALVD   ++ +N      D LASS+WEEVP SKTLITPVQCK+LWRQFK ETEY+VT
Sbjct: 821  LSAALVDNVKSAVTNRSITTVDPLASSTWEEVPPSKTLITPVQCKNLWRQFKMETEYSVT 880

Query: 346  QAISAQEASKRGNNWLPPPWAIIALLVLGFNEFMTLLRNPLWLLFMFVGYLLAKALWVQL 525
            QAI+AQEA+KR NNWLPPPWAI+A++VLGFNEFMTLLRNPL+L  +FV +LL+KALWVQL
Sbjct: 881  QAIAAQEANKRNNNWLPPPWAIVAMVVLGFNEFMTLLRNPLYLGVIFVAFLLSKALWVQL 940

Query: 526  DVSREFRNGVLPGILALSTKFLPAIMNIMRKLAEQGQGAANNDIQSNP-PLAANSFSGVN 702
            D++ EFR+G++PG+L+L+TK LP +MN++RKLAE+G      D + NP P + N  +GVN
Sbjct: 941  DIAGEFRHGIVPGMLSLATKLLPTVMNLLRKLAEEGAKPPTTDTRGNPLPGSKNFRNGVN 1000

Query: 703  ND--LXXXXXXEVTISDNGT-EYSS 768
                +      E+T S+NGT EYSS
Sbjct: 1001 TSSAVSSSASSEIT-SENGTEEYSS 1024


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