BLASTX nr result

ID: Bupleurum21_contig00016320 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016320
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278667.2| PREDICTED: probable glutamyl-tRNA synthetase...   115   5e-24
emb|CAN76587.1| hypothetical protein VITISV_020288 [Vitis vinifera]   115   5e-24
ref|XP_002318914.1| predicted protein [Populus trichocarpa] gi|2...   113   1e-23
ref|XP_002329985.1| predicted protein [Populus trichocarpa] gi|2...   112   4e-23
ref|XP_002512595.1| glutamyl-tRNA synthetase, cytoplasmic, putat...   108   5e-22

>ref|XP_002278667.2| PREDICTED: probable glutamyl-tRNA synthetase, cytoplasmic-like
           isoform 1 [Vitis vinifera]
          Length = 736

 Score =  115 bits (287), Expect = 5e-24
 Identities = 58/83 (69%), Positives = 67/83 (80%), Gaps = 1/83 (1%)
 Frame = -3

Query: 248 EKELKGSNALAKHSNGDV-EKGKVISRATSEVDLPHAEDGKVCLRFAPEPSGYLHIGHSK 72
           EKE +G N   K+ +GD  EKGK  S+AT+EVDLP AE G V LRFAPEPSGYLHIGHSK
Sbjct: 190 EKEQQGINNHMKNVSGDANEKGKASSKATAEVDLPDAEVGNVRLRFAPEPSGYLHIGHSK 249

Query: 71  AALLNQYFANRYHGKVIIRFDDT 3
           AAL+NQYFA RY G++I+RFDDT
Sbjct: 250 AALMNQYFAQRYQGQLIVRFDDT 272


>emb|CAN76587.1| hypothetical protein VITISV_020288 [Vitis vinifera]
          Length = 736

 Score =  115 bits (287), Expect = 5e-24
 Identities = 58/83 (69%), Positives = 67/83 (80%), Gaps = 1/83 (1%)
 Frame = -3

Query: 248 EKELKGSNALAKHSNGDV-EKGKVISRATSEVDLPHAEDGKVCLRFAPEPSGYLHIGHSK 72
           EKE +G N   K+ +GD  EKGK  S+AT+EVDLP AE G V LRFAPEPSGYLHIGHSK
Sbjct: 190 EKEQQGINNHMKNVSGDANEKGKASSKATAEVDLPDAEVGNVRLRFAPEPSGYLHIGHSK 249

Query: 71  AALLNQYFANRYHGKVIIRFDDT 3
           AAL+NQYFA RY G++I+RFDDT
Sbjct: 250 AALMNQYFAQRYRGQLIVRFDDT 272


>ref|XP_002318914.1| predicted protein [Populus trichocarpa] gi|222857290|gb|EEE94837.1|
           predicted protein [Populus trichocarpa]
          Length = 183

 Score =  113 bits (283), Expect = 1e-23
 Identities = 55/69 (79%), Positives = 59/69 (85%)
 Frame = -3

Query: 209 SNGDVEKGKVISRATSEVDLPHAEDGKVCLRFAPEPSGYLHIGHSKAALLNQYFANRYHG 30
           S  + EKGK  SR +SEVDLP AE GKVCLRFAPEPSGYLHIGHSKAALLNQYFA RY G
Sbjct: 114 SGDNPEKGKASSRPSSEVDLPDAEIGKVCLRFAPEPSGYLHIGHSKAALLNQYFAQRYQG 173

Query: 29  KVIIRFDDT 3
           ++IIRFDDT
Sbjct: 174 QMIIRFDDT 182


>ref|XP_002329985.1| predicted protein [Populus trichocarpa] gi|222871410|gb|EEF08541.1|
           predicted protein [Populus trichocarpa]
          Length = 728

 Score =  112 bits (279), Expect = 4e-23
 Identities = 52/64 (81%), Positives = 57/64 (89%)
 Frame = -3

Query: 194 EKGKVISRATSEVDLPHAEDGKVCLRFAPEPSGYLHIGHSKAALLNQYFANRYHGKVIIR 15
           EKGK  S+ +SEVDLP AE GKVCLRFAPEPSGYLHIGHSKAALLNQYFA RY G++I+R
Sbjct: 198 EKGKASSKPSSEVDLPEAEIGKVCLRFAPEPSGYLHIGHSKAALLNQYFAQRYQGRMIVR 257

Query: 14  FDDT 3
           FDDT
Sbjct: 258 FDDT 261


>ref|XP_002512595.1| glutamyl-tRNA synthetase, cytoplasmic, putative [Ricinus communis]
           gi|223548556|gb|EEF50047.1| glutamyl-tRNA synthetase,
           cytoplasmic, putative [Ricinus communis]
          Length = 728

 Score =  108 bits (270), Expect = 5e-22
 Identities = 54/69 (78%), Positives = 61/69 (88%), Gaps = 1/69 (1%)
 Frame = -3

Query: 206 NGDV-EKGKVISRATSEVDLPHAEDGKVCLRFAPEPSGYLHIGHSKAALLNQYFANRYHG 30
           NGD+ EKGK  S+ T+EVDLP AE GKVCLRFAPEPSGYLHIGH+KAALLNQYFA RY G
Sbjct: 192 NGDISEKGKAGSK-TAEVDLPDAEIGKVCLRFAPEPSGYLHIGHAKAALLNQYFAQRYQG 250

Query: 29  KVIIRFDDT 3
           ++I+RFDDT
Sbjct: 251 ELILRFDDT 259


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