BLASTX nr result

ID: Bupleurum21_contig00016319 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016319
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329985.1| predicted protein [Populus trichocarpa] gi|2...   145   3e-33
ref|XP_002278667.2| PREDICTED: probable glutamyl-tRNA synthetase...   137   9e-31
emb|CAN76587.1| hypothetical protein VITISV_020288 [Vitis vinifera]   137   9e-31
ref|XP_004169897.1| PREDICTED: LOW QUALITY PROTEIN: probable glu...   136   2e-30
ref|XP_004135579.1| PREDICTED: probable glutamate--tRNA ligase, ...   136   2e-30

>ref|XP_002329985.1| predicted protein [Populus trichocarpa] gi|222871410|gb|EEF08541.1|
           predicted protein [Populus trichocarpa]
          Length = 728

 Score =  145 bits (367), Expect = 3e-33
 Identities = 69/85 (81%), Positives = 77/85 (90%)
 Frame = -3

Query: 256 EKGKVISRATSEVDLPYAEDGKVCLRFAPEPSGYLHIGHSKAALLNQYFADRYHGKVIIR 77
           EKGK  S+ +SEVDLP AE GKVCLRFAPEPSGYLHIGHSKAALLNQYFA RY G++I+R
Sbjct: 198 EKGKASSKPSSEVDLPEAEIGKVCLRFAPEPSGYLHIGHSKAALLNQYFAQRYQGRMIVR 257

Query: 76  FDDTNPSKENNEFVDNILIDIKTLG 2
           FDDTNPSKE+NEFVDN+L DI+TLG
Sbjct: 258 FDDTNPSKESNEFVDNLLKDIETLG 282


>ref|XP_002278667.2| PREDICTED: probable glutamyl-tRNA synthetase, cytoplasmic-like
           isoform 1 [Vitis vinifera]
          Length = 736

 Score =  137 bits (345), Expect = 9e-31
 Identities = 65/85 (76%), Positives = 76/85 (89%)
 Frame = -3

Query: 256 EKGKVISRATSEVDLPYAEDGKVCLRFAPEPSGYLHIGHSKAALLNQYFADRYHGKVIIR 77
           EKGK  S+AT+EVDLP AE G V LRFAPEPSGYLHIGHSKAAL+NQYFA RY G++I+R
Sbjct: 209 EKGKASSKATAEVDLPDAEVGNVRLRFAPEPSGYLHIGHSKAALMNQYFAQRYQGQLIVR 268

Query: 76  FDDTNPSKENNEFVDNILIDIKTLG 2
           FDDTNP+KE+NEFV+N+L DI+TLG
Sbjct: 269 FDDTNPAKESNEFVENLLKDIETLG 293


>emb|CAN76587.1| hypothetical protein VITISV_020288 [Vitis vinifera]
          Length = 736

 Score =  137 bits (345), Expect = 9e-31
 Identities = 65/85 (76%), Positives = 76/85 (89%)
 Frame = -3

Query: 256 EKGKVISRATSEVDLPYAEDGKVCLRFAPEPSGYLHIGHSKAALLNQYFADRYHGKVIIR 77
           EKGK  S+AT+EVDLP AE G V LRFAPEPSGYLHIGHSKAAL+NQYFA RY G++I+R
Sbjct: 209 EKGKASSKATAEVDLPDAEVGNVRLRFAPEPSGYLHIGHSKAALMNQYFAQRYRGQLIVR 268

Query: 76  FDDTNPSKENNEFVDNILIDIKTLG 2
           FDDTNP+KE+NEFV+N+L DI+TLG
Sbjct: 269 FDDTNPAKESNEFVENLLKDIETLG 293


>ref|XP_004169897.1| PREDICTED: LOW QUALITY PROTEIN: probable glutamate--tRNA ligase,
           cytoplasmic-like, partial [Cucumis sativus]
          Length = 682

 Score =  136 bits (343), Expect = 2e-30
 Identities = 66/85 (77%), Positives = 76/85 (89%)
 Frame = -3

Query: 256 EKGKVISRATSEVDLPYAEDGKVCLRFAPEPSGYLHIGHSKAALLNQYFADRYHGKVIIR 77
           +KGK  S++T EVDLP  E GKV LRFAPEPSGYLHIGHSKAALLNQYFA RY+G+VIIR
Sbjct: 152 DKGKAGSKSTFEVDLPNVEFGKVRLRFAPEPSGYLHIGHSKAALLNQYFAQRYNGEVIIR 211

Query: 76  FDDTNPSKENNEFVDNILIDIKTLG 2
           FDDTNP+KE+NEFV+N+L DI+TLG
Sbjct: 212 FDDTNPAKESNEFVENLLKDIETLG 236


>ref|XP_004135579.1| PREDICTED: probable glutamate--tRNA ligase, cytoplasmic-like
           [Cucumis sativus]
          Length = 729

 Score =  136 bits (343), Expect = 2e-30
 Identities = 66/85 (77%), Positives = 76/85 (89%)
 Frame = -3

Query: 256 EKGKVISRATSEVDLPYAEDGKVCLRFAPEPSGYLHIGHSKAALLNQYFADRYHGKVIIR 77
           +KGK  S++T EVDLP  E GKV LRFAPEPSGYLHIGHSKAALLNQYFA RY+G+VIIR
Sbjct: 199 DKGKAGSKSTFEVDLPNVEFGKVRLRFAPEPSGYLHIGHSKAALLNQYFAQRYNGEVIIR 258

Query: 76  FDDTNPSKENNEFVDNILIDIKTLG 2
           FDDTNP+KE+NEFV+N+L DI+TLG
Sbjct: 259 FDDTNPAKESNEFVENLLKDIETLG 283


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