BLASTX nr result

ID: Bupleurum21_contig00016318 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016318
         (888 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267832.1| PREDICTED: 50S ribosomal protein L22, chloro...   143   2e-65
ref|XP_002524085.1| 50S ribosomal protein L22, putative [Ricinus...   139   6e-61
ref|XP_004139475.1| PREDICTED: 50S ribosomal protein L22, chloro...   130   6e-58
ref|XP_002322771.1| predicted protein [Populus trichocarpa] gi|2...   126   1e-56
ref|XP_003552362.1| PREDICTED: 50S ribosomal protein L22, chloro...   121   1e-54

>ref|XP_002267832.1| PREDICTED: 50S ribosomal protein L22, chloroplastic [Vitis
           vinifera] gi|296089316|emb|CBI39088.3| unnamed protein
           product [Vitis vinifera]
          Length = 271

 Score =  143 bits (360), Expect(2) = 2e-65
 Identities = 81/117 (69%), Positives = 90/117 (76%)
 Frame = -1

Query: 888 PYLGSLQGSFSANHGRPLYNYLQHMGFTSSRSLLSNASDATPVPSPLTPQLALTSGKSEA 709
           PYL  L    SA   RP Y Y Q +G +SSR LL++ SD TPV SPLTP LAL  GK+E 
Sbjct: 44  PYLQRLWKLPSATIPRPYYYYFQQLGISSSRQLLAD-SDVTPVASPLTPALALNGGKTED 102

Query: 708 HEAIKSKPSKVQAVLKNIKQSPKKVNLVAALVRGMRVEDALLQLQVTIKRASKTVYQ 538
            + + SKPSKVQAVLK IKQSPKKVNLVA LVRGMRVEDALLQLQ+T+KRASKTVYQ
Sbjct: 103 QKVV-SKPSKVQAVLKGIKQSPKKVNLVAELVRGMRVEDALLQLQLTVKRASKTVYQ 158



 Score =  133 bits (335), Expect(2) = 2e-65
 Identities = 63/85 (74%), Positives = 76/85 (89%)
 Frame = -2

Query: 428 KGFFKKRINYHARGKCGLKVRPECRLTVVVREITPEEEAEIAKLRVKNFVKLNKRERRLV 249
           KGFFKKR++YHA+GKCG+KVRPECRLTVVVRE+TPEEEA++AKLRV NF KL+KRE+RLV
Sbjct: 187 KGFFKKRVSYHAKGKCGIKVRPECRLTVVVREMTPEEEAKLAKLRVSNFRKLSKREKRLV 246

Query: 248 PHKLIETTPVWDRKGRSKGRVESSM 174
           PH+LIETT +W+RK  + G V S M
Sbjct: 247 PHQLIETTSIWNRK--ANGGVASDM 269


>ref|XP_002524085.1| 50S ribosomal protein L22, putative [Ricinus communis]
           gi|223536653|gb|EEF38295.1| 50S ribosomal protein L22,
           putative [Ricinus communis]
          Length = 278

 Score =  139 bits (351), Expect(2) = 6e-61
 Identities = 81/118 (68%), Positives = 91/118 (77%), Gaps = 1/118 (0%)
 Frame = -1

Query: 888 PYLGSLQGSFSANHGRPLYNYLQHMGFTSSRSLLSNASDATPVPSPLTPQLA-LTSGKSE 712
           P L  L  S S N  R  Y YLQ  G +SSR LL+++S+ TP+ SPLTP L  L+SGK+E
Sbjct: 46  PCLHRLWKSPSTNISRSFYQYLQQSGISSSRKLLADSSEQTPIRSPLTPALTPLSSGKTE 105

Query: 711 AHEAIKSKPSKVQAVLKNIKQSPKKVNLVAALVRGMRVEDALLQLQVTIKRASKTVYQ 538
             +AI  K SKVQAVLKNIKQSPKKVNLVA LVRGMRVEDALLQLQVTIKRA+KTVYQ
Sbjct: 106 EKKAI-CKQSKVQAVLKNIKQSPKKVNLVAELVRGMRVEDALLQLQVTIKRAAKTVYQ 162



 Score =  121 bits (304), Expect(2) = 6e-61
 Identities = 57/74 (77%), Positives = 67/74 (90%)
 Frame = -2

Query: 428 KGFFKKRINYHARGKCGLKVRPECRLTVVVREITPEEEAEIAKLRVKNFVKLNKRERRLV 249
           KG FKKRI+YHA+G+ G+KVR ECRLTVVVREITPEEEA+IA+LRV NF K  K+E+RLV
Sbjct: 191 KGNFKKRISYHAKGRAGVKVRAECRLTVVVREITPEEEAKIARLRVHNFRKRTKQEKRLV 250

Query: 248 PHKLIETTPVWDRK 207
           PHKLIETTP+W+RK
Sbjct: 251 PHKLIETTPIWNRK 264


>ref|XP_004139475.1| PREDICTED: 50S ribosomal protein L22, chloroplastic-like [Cucumis
           sativus]
          Length = 271

 Score =  130 bits (328), Expect(2) = 6e-58
 Identities = 57/82 (69%), Positives = 73/82 (89%)
 Frame = -2

Query: 428 KGFFKKRINYHARGKCGLKVRPECRLTVVVREITPEEEAEIAKLRVKNFVKLNKRERRLV 249
           KG F+KR++YHA+G+CG++V+PECRLTVV+RE TPEEEA+IAKL+V NF KL KRE +LV
Sbjct: 189 KGLFRKRLSYHAKGRCGVEVKPECRLTVVLRETTPEEEAKIAKLKVSNFRKLTKREHQLV 248

Query: 248 PHKLIETTPVWDRKGRSKGRVE 183
           PHKLIETTP+W+RKG++K   E
Sbjct: 249 PHKLIETTPIWNRKGKAKANTE 270



 Score =  120 bits (301), Expect(2) = 6e-58
 Identities = 72/119 (60%), Positives = 86/119 (72%), Gaps = 2/119 (1%)
 Frame = -1

Query: 888 PYLGSLQGSFSANHGRPLYNYLQHMGFTSSRSLLSNASDATPVPSPLTPQLALTSGKS-- 715
           PYL  L    SA   +P +  LQ MG +SSR LL++  +   V SPLT  LAL+SGK   
Sbjct: 43  PYLQRLLKPSSAVIAQPDFRCLQQMGISSSRMLLADKPEEA-VSSPLTSALALSSGKDGD 101

Query: 714 EAHEAIKSKPSKVQAVLKNIKQSPKKVNLVAALVRGMRVEDALLQLQVTIKRASKTVYQ 538
           +  + +  K S+VQAVLK IKQSPKKVNLVAALVRGMRVEDAL+QLQ+T+KRASKTVYQ
Sbjct: 102 KTDQKVICKRSQVQAVLKGIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQ 160


>ref|XP_002322771.1| predicted protein [Populus trichocarpa] gi|222867401|gb|EEF04532.1|
           predicted protein [Populus trichocarpa]
          Length = 193

 Score =  126 bits (317), Expect(2) = 1e-56
 Identities = 59/75 (78%), Positives = 68/75 (90%)
 Frame = -2

Query: 428 KGFFKKRINYHARGKCGLKVRPECRLTVVVREITPEEEAEIAKLRVKNFVKLNKRERRLV 249
           KGFFKKRI+YHA+GKCG++ RPE RLTVVVRE TPEEEA+IAKLRV NF KL K+ER+LV
Sbjct: 119 KGFFKKRISYHAKGKCGIRERPESRLTVVVRETTPEEEAKIAKLRVHNFRKLTKKERQLV 178

Query: 248 PHKLIETTPVWDRKG 204
           PHKLIETT +W+RKG
Sbjct: 179 PHKLIETTSIWNRKG 193



 Score =  120 bits (301), Expect(2) = 1e-56
 Identities = 64/92 (69%), Positives = 76/92 (82%)
 Frame = -1

Query: 813 GFTSSRSLLSNASDATPVPSPLTPQLALTSGKSEAHEAIKSKPSKVQAVLKNIKQSPKKV 634
           G ++SR LL+++S+  PV SP TP LAL SGK+E  +   SKP KVQAVLK IK SPKK+
Sbjct: 1   GISNSRKLLADSSEEQPVSSPFTPMLALESGKTE--QKAVSKPEKVQAVLKGIKMSPKKL 58

Query: 633 NLVAALVRGMRVEDALLQLQVTIKRASKTVYQ 538
           NLVAALVRGMRVEDALLQLQVT+KRA+KTV+Q
Sbjct: 59  NLVAALVRGMRVEDALLQLQVTVKRAAKTVFQ 90


>ref|XP_003552362.1| PREDICTED: 50S ribosomal protein L22, chloroplastic-like [Glycine
           max]
          Length = 277

 Score =  121 bits (303), Expect(2) = 1e-54
 Identities = 64/103 (62%), Positives = 80/103 (77%), Gaps = 1/103 (0%)
 Frame = -1

Query: 843 RPLYNYLQHMGFTSSRSLLSNASDATPVPSPLTPQLALTSGKSEAH-EAIKSKPSKVQAV 667
           RP++   QH G +SS  LL+N+S+ TPV SPL P   L+S K E   + + +KP KVQA+
Sbjct: 60  RPVFLTFQHQGISSSAQLLANSSEETPVLSPLAPVSLLSSSKGEDQKQKVVTKPEKVQAI 119

Query: 666 LKNIKQSPKKVNLVAALVRGMRVEDALLQLQVTIKRASKTVYQ 538
           LK IKQSPKKVNLVAALVRGM V+DAL+QL++TIKRA+KTVYQ
Sbjct: 120 LKAIKQSPKKVNLVAALVRGMLVKDALMQLELTIKRAAKTVYQ 162



 Score =  119 bits (297), Expect(2) = 1e-54
 Identities = 58/87 (66%), Positives = 71/87 (81%)
 Frame = -2

Query: 428 KGFFKKRINYHARGKCGLKVRPECRLTVVVREITPEEEAEIAKLRVKNFVKLNKRERRLV 249
           KGF+KKR+  HA+GK  L+VRPECRLTVVVREIT EEEAEIA+LRV NF +L KR++RLV
Sbjct: 191 KGFYKKRLWPHAKGKSSLRVRPECRLTVVVREITAEEEAEIARLRVHNFKRLTKRQKRLV 250

Query: 248 PHKLIETTPVWDRKGRSKGRVESSMTP 168
           PH+LIE+ P+W RK +S G+   S TP
Sbjct: 251 PHQLIESNPIWGRKNKSSGQ-NLSATP 276


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