BLASTX nr result

ID: Bupleurum21_contig00016316 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016316
         (1135 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143447.1| PREDICTED: IMPACT family member in pol 5'reg...   320   5e-85
ref|XP_002530693.1| conserved hypothetical protein [Ricinus comm...   314   3e-83
ref|NP_001242306.1| uncharacterized protein LOC100820330 [Glycin...   313   5e-83
gb|AAM63017.1| unknown [Arabidopsis thaliana]                         302   9e-80
ref|XP_002866916.1| hypothetical protein ARALYDRAFT_490803 [Arab...   302   1e-79

>ref|XP_004143447.1| PREDICTED: IMPACT family member in pol 5'region-like [Cucumis
           sativus] gi|449518849|ref|XP_004166448.1| PREDICTED:
           IMPACT family member in pol 5'region-like [Cucumis
           sativus]
          Length = 248

 Score =  320 bits (819), Expect = 5e-85
 Identities = 154/196 (78%), Positives = 177/196 (90%)
 Frame = +2

Query: 182 AFTTLKEQVRFEKEIKKSKFIAIAAPLFDESSAQSFLAQVRETRATHNCWAYKVGDQYRS 361
           A+TT+KE VRFEKEIKKSKFIAIA P+  E SA SFL+QVR+ RATHNCWAY+VGDQYRS
Sbjct: 52  AYTTIKEIVRFEKEIKKSKFIAIAGPVSSEQSAFSFLSQVRDPRATHNCWAYQVGDQYRS 111

Query: 362 SDDGEPSGTAGRPIHSAIESSGLDRVMVVVIRYFGGIKLGTGGLVRAYGGLTSECLRSAP 541
           +DDGEPSGTAG+PIHSAI SSG+DRVMVVVIRYFGGIKLGTGGLVRAYGG+ SECL+SA 
Sbjct: 112 NDDGEPSGTAGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQ 171

Query: 542 TCFVKSKVRMGLEVTYDLLGVLYHQLQQYQVEDIQQDYDTGKDDTTMVTFKVEFDQAESL 721
           TC VKSKV MG+EV +DLLGVLYHQLQ +QVEDI+QDYD+GKD  TMVTFKV+FD  E L
Sbjct: 172 TCVVKSKVPMGVEVPFDLLGVLYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKL 231

Query: 722 QEAVRNNCSREIVFYK 769
           ++A+++NCSRE+VFYK
Sbjct: 232 EDAIKSNCSRELVFYK 247


>ref|XP_002530693.1| conserved hypothetical protein [Ricinus communis]
           gi|223529749|gb|EEF31688.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 237

 Score =  314 bits (804), Expect = 3e-83
 Identities = 146/196 (74%), Positives = 177/196 (90%)
 Frame = +2

Query: 182 AFTTLKEQVRFEKEIKKSKFIAIAAPLFDESSAQSFLAQVRETRATHNCWAYKVGDQYRS 361
           AFTT+KE+V FE+EIKKSKFIAIA P+ DE SA SFL+QV++ RATHNCWAYKVGDQ+RS
Sbjct: 41  AFTTIKERVTFEREIKKSKFIAIAGPISDEQSAFSFLSQVKDPRATHNCWAYKVGDQFRS 100

Query: 362 SDDGEPSGTAGRPIHSAIESSGLDRVMVVVIRYFGGIKLGTGGLVRAYGGLTSECLRSAP 541
           +DDGEPSGTAG+PI SAI+SSG+DRVMVVVIRYFGGIKLGTGGLVRAYGG+ SECLR+AP
Sbjct: 101 NDDGEPSGTAGKPIQSAIDSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLRNAP 160

Query: 542 TCFVKSKVRMGLEVTYDLLGVLYHQLQQYQVEDIQQDYDTGKDDTTMVTFKVEFDQAESL 721
           TC VKSK+ MG+EV +DL+G+L+HQLQ +QV++I QDY+TGKD   MV+FKV+FDQ E L
Sbjct: 161 TCLVKSKIPMGIEVPFDLIGILHHQLQSFQVDNIMQDYETGKDGIAMVSFKVDFDQVEKL 220

Query: 722 QEAVRNNCSREIVFYK 769
           ++A++ NCSR+IVFYK
Sbjct: 221 EDAIKANCSRDIVFYK 236


>ref|NP_001242306.1| uncharacterized protein LOC100820330 [Glycine max]
           gi|255641591|gb|ACU21068.1| unknown [Glycine max]
          Length = 236

 Score =  313 bits (802), Expect = 5e-83
 Identities = 149/196 (76%), Positives = 175/196 (89%)
 Frame = +2

Query: 182 AFTTLKEQVRFEKEIKKSKFIAIAAPLFDESSAQSFLAQVRETRATHNCWAYKVGDQYRS 361
           AFTTL+E+V FEKEIKKSKFIAIA P+ DE SA SFL+QVR+ RATHNCWAYKVGDQYRS
Sbjct: 40  AFTTLQERVTFEKEIKKSKFIAIAGPIPDEKSAMSFLSQVRDPRATHNCWAYKVGDQYRS 99

Query: 362 SDDGEPSGTAGRPIHSAIESSGLDRVMVVVIRYFGGIKLGTGGLVRAYGGLTSECLRSAP 541
           +DDGEPSGTAG+PI +AI+SSG+DRVMVVVIRYFGGIKLGTGGLVRAYGG+ SECLR+AP
Sbjct: 100 NDDGEPSGTAGKPIQTAIDSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLRNAP 159

Query: 542 TCFVKSKVRMGLEVTYDLLGVLYHQLQQYQVEDIQQDYDTGKDDTTMVTFKVEFDQAESL 721
           TC VK+KV MG+EV ++L+GVL HQLQ +  EDI+QDYDTGKD  +MVTFKV+FDQAE L
Sbjct: 160 TCLVKTKVPMGVEVPFELVGVLNHQLQSFHAEDIKQDYDTGKDGISMVTFKVDFDQAEKL 219

Query: 722 QEAVRNNCSREIVFYK 769
           ++A+  NCSRE+ FY+
Sbjct: 220 EDAIEANCSRELQFYR 235


>gb|AAM63017.1| unknown [Arabidopsis thaliana]
          Length = 234

 Score =  302 bits (774), Expect = 9e-80
 Identities = 151/220 (68%), Positives = 179/220 (81%), Gaps = 1/220 (0%)
 Frame = +2

Query: 113 SGKRSMVTYXXXXXXXXXXGGVAAFTTLKEQVRFEKEIKKSKFIAIAAPLFDESSAQSFL 292
           SGKRSM +               +FTTLKE V  EKEIKKSKFIAIA P+  E SAQ FL
Sbjct: 26  SGKRSMAS------------NSGSFTTLKETVSVEKEIKKSKFIAIAGPISSEQSAQMFL 73

Query: 293 AQVRETRATHNCWAYKVGDQY-RSSDDGEPSGTAGRPIHSAIESSGLDRVMVVVIRYFGG 469
           +QVR+ RA+HNCWAYK+GD + R SDDGEPSGTAG+PI SAI SSGLDRVMVVVIRYFGG
Sbjct: 74  SQVRDPRASHNCWAYKIGDHHHRCSDDGEPSGTAGKPIQSAILSSGLDRVMVVVIRYFGG 133

Query: 470 IKLGTGGLVRAYGGLTSECLRSAPTCFVKSKVRMGLEVTYDLLGVLYHQLQQYQVEDIQQ 649
           IKLGTGGLVRAYGG+TS+CL++APTC VKSKV+MG+EVT+DLLGVLY+QLQ    EDI++
Sbjct: 134 IKLGTGGLVRAYGGVTSDCLKTAPTCLVKSKVQMGVEVTFDLLGVLYNQLQSCHAEDIKE 193

Query: 650 DYDTGKDDTTMVTFKVEFDQAESLQEAVRNNCSREIVFYK 769
           DYDTGKD T MV+FKVEFD  + L++A+++NC R++VFYK
Sbjct: 194 DYDTGKDGTAMVSFKVEFDLVDKLEDAIKSNCRRDLVFYK 233


>ref|XP_002866916.1| hypothetical protein ARALYDRAFT_490803 [Arabidopsis lyrata subsp.
           lyrata] gi|297312752|gb|EFH43175.1| hypothetical protein
           ARALYDRAFT_490803 [Arabidopsis lyrata subsp. lyrata]
          Length = 239

 Score =  302 bits (773), Expect = 1e-79
 Identities = 150/220 (68%), Positives = 181/220 (82%), Gaps = 1/220 (0%)
 Frame = +2

Query: 113 SGKRSMVTYXXXXXXXXXXGGVAAFTTLKEQVRFEKEIKKSKFIAIAAPLFDESSAQSFL 292
           SGK SM +           G  ++FTT+KE V  EKEIKKSKFIAIA P+  E SAQ F 
Sbjct: 28  SGKSSMAS---------NSGSDSSFTTIKEIVSVEKEIKKSKFIAIAGPISTEQSAQMFF 78

Query: 293 AQVRETRATHNCWAYKVGDQY-RSSDDGEPSGTAGRPIHSAIESSGLDRVMVVVIRYFGG 469
           +QVR++RA+HNCWAYK+GDQ+ R SDDGEPSGTAG+PI SAI SSGLDRVMVVVIRYFGG
Sbjct: 79  SQVRDSRASHNCWAYKIGDQHHRCSDDGEPSGTAGKPIQSAILSSGLDRVMVVVIRYFGG 138

Query: 470 IKLGTGGLVRAYGGLTSECLRSAPTCFVKSKVRMGLEVTYDLLGVLYHQLQQYQVEDIQQ 649
           IKLGTGGLVRAYGG+TS+CL++APTC VKSKV+MG+EVT+DLLGVLY+QLQ    EDI++
Sbjct: 139 IKLGTGGLVRAYGGVTSDCLKTAPTCLVKSKVQMGVEVTFDLLGVLYNQLQSCHAEDIKE 198

Query: 650 DYDTGKDDTTMVTFKVEFDQAESLQEAVRNNCSREIVFYK 769
           DYDTGKD T MV+FKVEFD  + L++A+++NC R++VFYK
Sbjct: 199 DYDTGKDGTAMVSFKVEFDLVDKLEDAIKSNCRRDLVFYK 238


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