BLASTX nr result

ID: Bupleurum21_contig00016313 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016313
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003602096.1| Spastin [Medicago truncatula] gi|355491144|g...   114   8e-24
ref|XP_002511201.1| ATP binding protein, putative [Ricinus commu...   108   4e-22
ref|XP_003523142.1| PREDICTED: uncharacterized protein LOC100780...   106   2e-21
ref|XP_003526964.1| PREDICTED: uncharacterized protein LOC100778...   105   3e-21
ref|XP_002279926.2| PREDICTED: uncharacterized protein LOC100266...   104   6e-21

>ref|XP_003602096.1| Spastin [Medicago truncatula] gi|355491144|gb|AES72347.1| Spastin
           [Medicago truncatula]
          Length = 1260

 Score =  114 bits (285), Expect = 8e-24
 Identities = 62/112 (55%), Positives = 81/112 (72%), Gaps = 1/112 (0%)
 Frame = +3

Query: 9   SGASVAEATEDTFIDMETSDTSNSPTK-GLESQLKTETESILSPAGKPKNSLFKSGDRVR 185
           +   +A++T+    + +T  +SN PT  GLESQ K ET+S+ S +G  KN LFK GDRV+
Sbjct: 559 TATDMAKSTDPPASETDTPSSSNVPTPLGLESQAKLETDSVPSTSGTAKNCLFKLGDRVK 618

Query: 186 YIGAVSGSLYATSSPSRGPAPGNKGTVVLPFEDNPLSKIGVKFDKPVPDGVD 341
           Y  + S  LY TSS SRGP+ G++G VVL F+DNPLSKIGV+FDKP+PDGVD
Sbjct: 619 YSSS-SACLYQTSS-SRGPSNGSRGKVVLIFDDNPLSKIGVRFDKPIPDGVD 668


>ref|XP_002511201.1| ATP binding protein, putative [Ricinus communis]
           gi|223550316|gb|EEF51803.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 1240

 Score =  108 bits (270), Expect = 4e-22
 Identities = 56/99 (56%), Positives = 72/99 (72%), Gaps = 1/99 (1%)
 Frame = +3

Query: 48  IDMETSDTSNSPTK-GLESQLKTETESILSPAGKPKNSLFKSGDRVRYIGAVSGSLYATS 224
           ++ +T   SN+P+  G ESQ K + +++ S +G  +N LF+ GDRVRY+    G LY T+
Sbjct: 552 VETDTPSCSNAPSSSGQESQPKMDADAVPSSSGTSRNLLFRIGDRVRYM---FGGLYPTA 608

Query: 225 SPSRGPAPGNKGTVVLPFEDNPLSKIGVKFDKPVPDGVD 341
           SPSRGP  G +G VVL FEDNPLSKIGV+FDKPVPDGVD
Sbjct: 609 SPSRGPPNGIRGKVVLVFEDNPLSKIGVRFDKPVPDGVD 647


>ref|XP_003523142.1| PREDICTED: uncharacterized protein LOC100780098 [Glycine max]
          Length = 1234

 Score =  106 bits (265), Expect = 2e-21
 Identities = 54/112 (48%), Positives = 75/112 (66%), Gaps = 1/112 (0%)
 Frame = +3

Query: 9   SGASVAEATEDTFIDMETSDTSNSPTK-GLESQLKTETESILSPAGKPKNSLFKSGDRVR 185
           +   +A   + +  + ET ++SN+PT  G ESQ K E +++ S +G  KN +FK GDRV+
Sbjct: 531 TATDMARCMDPSASEPETPNSSNAPTPYGFESQPKLEADNVPSTSGTAKNCVFKLGDRVK 590

Query: 186 YIGAVSGSLYATSSPSRGPAPGNKGTVVLPFEDNPLSKIGVKFDKPVPDGVD 341
           Y  +  G     +  SRGPA G++G VVL F+DNPLSKIGV+FDKP+PDGVD
Sbjct: 591 YSSSSGGLYQLQTISSRGPANGSRGKVVLLFDDNPLSKIGVRFDKPIPDGVD 642


>ref|XP_003526964.1| PREDICTED: uncharacterized protein LOC100778164 [Glycine max]
          Length = 1238

 Score =  105 bits (263), Expect = 3e-21
 Identities = 53/112 (47%), Positives = 76/112 (67%), Gaps = 1/112 (0%)
 Frame = +3

Query: 9   SGASVAEATEDTFIDMETSDTSNSPTK-GLESQLKTETESILSPAGKPKNSLFKSGDRVR 185
           S + +A   + +  + +T ++SN+PT  G ESQ K E +++ S +G  KN +FK GDRV+
Sbjct: 535 SSSDMARCMDPSASEPDTPNSSNAPTPYGFESQPKLEADNVPSTSGTAKNCVFKLGDRVK 594

Query: 186 YIGAVSGSLYATSSPSRGPAPGNKGTVVLPFEDNPLSKIGVKFDKPVPDGVD 341
           Y  +  G     +  S+GPA G++G VVL F+DNPLSKIGV+FDKP+PDGVD
Sbjct: 595 YSSSSGGLYQLQTISSKGPANGSRGKVVLLFDDNPLSKIGVRFDKPIPDGVD 646


>ref|XP_002279926.2| PREDICTED: uncharacterized protein LOC100266414 [Vitis vinifera]
          Length = 1247

 Score =  104 bits (260), Expect = 6e-21
 Identities = 56/115 (48%), Positives = 80/115 (69%), Gaps = 2/115 (1%)
 Frame = +3

Query: 3   QNSGAS-VAEATEDTFIDMETSDTSNSPTK-GLESQLKTETESILSPAGKPKNSLFKSGD 176
           Q+SG++ +A+    +  + +T + +N+P    LESQ K E +++ S +G  KN LF+ GD
Sbjct: 540 QSSGSTELAKNMASSAGEADTPNIANAPISCELESQPKLENDTVPSSSGTTKNHLFRIGD 599

Query: 177 RVRYIGAVSGSLYATSSPSRGPAPGNKGTVVLPFEDNPLSKIGVKFDKPVPDGVD 341
           RVR++G+ SG  Y+  S SRGP  G +G V+LPFEDNPLSKIGV+FDK + DGVD
Sbjct: 600 RVRFMGSASGGSYSAVSASRGPTFGIRGKVLLPFEDNPLSKIGVRFDKLITDGVD 654


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