BLASTX nr result

ID: Bupleurum21_contig00016308 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016308
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284912.1| PREDICTED: uncharacterized protein LOC100250...   167   6e-40
ref|XP_002514758.1| membrane associated ring finger 1,8, putativ...   165   4e-39
ref|XP_002522435.1| membrane associated ring finger 1,8, putativ...   164   9e-39
ref|XP_003613769.1| E3 ubiquitin-protein ligase MARCH3 [Medicago...   162   3e-38
ref|XP_003613768.1| E3 ubiquitin-protein ligase MARCH3 [Medicago...   162   3e-38

>ref|XP_002284912.1| PREDICTED: uncharacterized protein LOC100250124 [Vitis vinifera]
           gi|297733975|emb|CBI15222.3| unnamed protein product
           [Vitis vinifera]
          Length = 291

 Score =  167 bits (424), Expect = 6e-40
 Identities = 79/100 (79%), Positives = 87/100 (87%), Gaps = 1/100 (1%)
 Frame = -1

Query: 299 WCNEKGDTTCEICHQPYQAGYTAPPP-LAEETTIDISGPWTIDGNPLDLHDPRRLAMAAA 123
           WCNEKGD TCEICHQPYQ GYTAPPP  +E+ TIDIS  WTI G PLDL+DPR LAMAAA
Sbjct: 105 WCNEKGDVTCEICHQPYQPGYTAPPPPQSEDATIDISEGWTISGTPLDLNDPRLLAMAAA 164

Query: 122 ERHLLEADYDEYDDSNASGASFCRSAVLILMALLLMRHAL 3
           ERH LEA+Y+EY D+NASGA+FCRSA LILMALLL+RHAL
Sbjct: 165 ERHFLEAEYEEYADTNASGAAFCRSAALILMALLLLRHAL 204


>ref|XP_002514758.1| membrane associated ring finger 1,8, putative [Ricinus communis]
           gi|223546362|gb|EEF47864.1| membrane associated ring
           finger 1,8, putative [Ricinus communis]
          Length = 292

 Score =  165 bits (417), Expect = 4e-39
 Identities = 79/100 (79%), Positives = 85/100 (85%), Gaps = 1/100 (1%)
 Frame = -1

Query: 299 WCNEKGDTTCEICHQPYQAGYTAPPPLA-EETTIDISGPWTIDGNPLDLHDPRRLAMAAA 123
           WCNEKGD TCEICHQPYQ  YTA PPL  E+T IDIS  WTI G PLDLHDPR LAMAAA
Sbjct: 102 WCNEKGDITCEICHQPYQPNYTASPPLPLEDTAIDISEGWTIAGTPLDLHDPRILAMAAA 161

Query: 122 ERHLLEADYDEYDDSNASGASFCRSAVLILMALLLMRHAL 3
           ERH LEA+YDEY DS+ASGA+FCRSA LILMALLL+RHA+
Sbjct: 162 ERHFLEAEYDEYADSSASGAAFCRSAALILMALLLLRHAM 201


>ref|XP_002522435.1| membrane associated ring finger 1,8, putative [Ricinus communis]
           gi|223538320|gb|EEF39927.1| membrane associated ring
           finger 1,8, putative [Ricinus communis]
          Length = 283

 Score =  164 bits (414), Expect = 9e-39
 Identities = 78/101 (77%), Positives = 84/101 (83%), Gaps = 2/101 (1%)
 Frame = -1

Query: 299 WCNEKGDTTCEICHQPYQAGYTAP--PPLAEETTIDISGPWTIDGNPLDLHDPRRLAMAA 126
           WCNEKGD TCEICH+PYQ GYTAP  PP AE+T IDI G WTI G PLDL DPR LA+A 
Sbjct: 98  WCNEKGDITCEICHKPYQPGYTAPLRPPQAEDTAIDIGGGWTISGTPLDLRDPRLLAIAE 157

Query: 125 AERHLLEADYDEYDDSNASGASFCRSAVLILMALLLMRHAL 3
           AERH LEA+YDEY  SNASGA+FCRSA LILMALLL+RHAL
Sbjct: 158 AERHFLEAEYDEYAASNASGAAFCRSAALILMALLLLRHAL 198


>ref|XP_003613769.1| E3 ubiquitin-protein ligase MARCH3 [Medicago truncatula]
           gi|355515104|gb|AES96727.1| E3 ubiquitin-protein ligase
           MARCH3 [Medicago truncatula]
          Length = 257

 Score =  162 bits (410), Expect = 3e-38
 Identities = 76/101 (75%), Positives = 86/101 (85%), Gaps = 2/101 (1%)
 Frame = -1

Query: 299 WCNEKGDTTCEICHQPYQAGYTAPPP--LAEETTIDISGPWTIDGNPLDLHDPRRLAMAA 126
           WCNEKGD TCEICHQPYQ+GYTAPPP  + EETTI+I G WT+ G+PLDL DPR LA+A 
Sbjct: 103 WCNEKGDITCEICHQPYQSGYTAPPPRPVPEETTIEIGGGWTLSGSPLDLRDPRLLAIAE 162

Query: 125 AERHLLEADYDEYDDSNASGASFCRSAVLILMALLLMRHAL 3
           AER  L+A+YDEY  SNASGA+FCRSA LILMALLL+RHAL
Sbjct: 163 AERQFLDAEYDEYAASNASGAAFCRSAALILMALLLLRHAL 203


>ref|XP_003613768.1| E3 ubiquitin-protein ligase MARCH3 [Medicago truncatula]
           gi|355515103|gb|AES96726.1| E3 ubiquitin-protein ligase
           MARCH3 [Medicago truncatula]
          Length = 290

 Score =  162 bits (410), Expect = 3e-38
 Identities = 76/101 (75%), Positives = 86/101 (85%), Gaps = 2/101 (1%)
 Frame = -1

Query: 299 WCNEKGDTTCEICHQPYQAGYTAPPP--LAEETTIDISGPWTIDGNPLDLHDPRRLAMAA 126
           WCNEKGD TCEICHQPYQ+GYTAPPP  + EETTI+I G WT+ G+PLDL DPR LA+A 
Sbjct: 103 WCNEKGDITCEICHQPYQSGYTAPPPRPVPEETTIEIGGGWTLSGSPLDLRDPRLLAIAE 162

Query: 125 AERHLLEADYDEYDDSNASGASFCRSAVLILMALLLMRHAL 3
           AER  L+A+YDEY  SNASGA+FCRSA LILMALLL+RHAL
Sbjct: 163 AERQFLDAEYDEYAASNASGAAFCRSAALILMALLLLRHAL 203


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