BLASTX nr result

ID: Bupleurum21_contig00016301 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016301
         (525 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFZ78620.1| hypothetical protein [Populus tomentosa]               100   1e-19
ref|XP_002528346.1| Auxin-responsive protein IAA13, putative [Ri...    97   2e-18
gb|AEX00355.1| IAA12 [Solanum lycopersicum]                            96   4e-18
ref|XP_002285483.2| PREDICTED: auxin-responsive protein IAA13-li...    95   7e-18
emb|CBI23724.3| unnamed protein product [Vitis vinifera]               95   7e-18

>gb|AFZ78620.1| hypothetical protein [Populus tomentosa]
          Length = 291

 Score =  100 bits (250), Expect = 1e-19
 Identities = 55/101 (54%), Positives = 69/101 (68%), Gaps = 3/101 (2%)
 Frame = -1

Query: 519 PPKLLVGSSEFVLTYEDKDGDWMLVGDVPWRMFVSSVKRLRIMRTTEANGLGKKLVMKT* 340
           P KLL G SEFVLTYEDK+GDWMLVGDVPW MF++SVKRLRIMRT+EANGLG +    T 
Sbjct: 192 PSKLLDGLSEFVLTYEDKEGDWMLVGDVPWGMFLNSVKRLRIMRTSEANGLGMQNFQSTV 251

Query: 339 RKPYVAHIPVVLYLHI---VF*NIKAPKTQERHGRQRARAI 226
             P +A  P      +    +  I AP+ Q+R+ +QR + +
Sbjct: 252 LCP-LASFPTYFCFSLHSKTYSLIAAPRFQDRNEKQRIKPV 291


>ref|XP_002528346.1| Auxin-responsive protein IAA13, putative [Ricinus communis]
           gi|223532214|gb|EEF34018.1| Auxin-responsive protein
           IAA13, putative [Ricinus communis]
          Length = 318

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 54/98 (55%), Positives = 60/98 (61%)
 Frame = -1

Query: 519 PPKLLVGSSEFVLTYEDKDGDWMLVGDVPWRMFVSSVKRLRIMRTTEANGLGKKLVMKT* 340
           P KLL GSSEFVLTYEDK+GDWMLVGDVPW MF++SVKRLRIMRT+EANGL         
Sbjct: 252 PSKLLDGSSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMRTSEANGL--------- 302

Query: 339 RKPYVAHIPVVLYLHIVF*NIKAPKTQERHGRQRARAI 226
                                 AP+ QER GRQR + I
Sbjct: 303 ----------------------APRFQERTGRQRRKPI 318


>gb|AEX00355.1| IAA12 [Solanum lycopersicum]
          Length = 313

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 43/50 (86%), Positives = 48/50 (96%)
 Frame = -1

Query: 513 KLLVGSSEFVLTYEDKDGDWMLVGDVPWRMFVSSVKRLRIMRTTEANGLG 364
           +LL GSSEFVLTYEDKDGDWMLVGDVPW MF+SSVKRLR+MRT++ANGLG
Sbjct: 246 RLLDGSSEFVLTYEDKDGDWMLVGDVPWEMFISSVKRLRVMRTSDANGLG 295


>ref|XP_002285483.2| PREDICTED: auxin-responsive protein IAA13-like isoform 2 [Vitis
           vinifera]
          Length = 321

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 45/62 (72%), Positives = 53/62 (85%)
 Frame = -1

Query: 519 PPKLLVGSSEFVLTYEDKDGDWMLVGDVPWRMFVSSVKRLRIMRTTEANGLGKKLVMKT* 340
           P KLL GSSEFVLTYEDK+GDWMLVGDVPW MF+S+VKRLRIMRT+EANGL  +   ++ 
Sbjct: 255 PSKLLDGSSEFVLTYEDKEGDWMLVGDVPWGMFLSTVKRLRIMRTSEANGLAPRFQERSE 314

Query: 339 RK 334
           R+
Sbjct: 315 RQ 316


>emb|CBI23724.3| unnamed protein product [Vitis vinifera]
          Length = 283

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 45/62 (72%), Positives = 53/62 (85%)
 Frame = -1

Query: 519 PPKLLVGSSEFVLTYEDKDGDWMLVGDVPWRMFVSSVKRLRIMRTTEANGLGKKLVMKT* 340
           P KLL GSSEFVLTYEDK+GDWMLVGDVPW MF+S+VKRLRIMRT+EANGL  +   ++ 
Sbjct: 217 PSKLLDGSSEFVLTYEDKEGDWMLVGDVPWGMFLSTVKRLRIMRTSEANGLAPRFQERSE 276

Query: 339 RK 334
           R+
Sbjct: 277 RQ 278


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