BLASTX nr result

ID: Bupleurum21_contig00016287 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016287
         (1847 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283484.1| PREDICTED: F-box/kelch-repeat protein At1g55...   785   0.0  
ref|XP_002527061.1| Protein AFR, putative [Ricinus communis] gi|...   767   0.0  
ref|XP_002304010.1| predicted protein [Populus trichocarpa] gi|2...   751   0.0  
ref|XP_004142161.1| PREDICTED: F-box/kelch-repeat protein At1g55...   751   0.0  
emb|CCH50979.1| T4.18 [Malus x robusta]                               745   0.0  

>ref|XP_002283484.1| PREDICTED: F-box/kelch-repeat protein At1g55270 [Vitis vinifera]
            gi|147841213|emb|CAN64353.1| hypothetical protein
            VITISV_013831 [Vitis vinifera]
          Length = 437

 Score =  785 bits (2027), Expect = 0.0
 Identities = 370/437 (84%), Positives = 399/437 (91%)
 Frame = -2

Query: 1756 MEQSVERPPNAHRGFRVQAPLVDSISCYCKVDAGLKTVAGARKFVPGSKLCIQPDINPRA 1577
            M+Q VE+ PNA RGFRVQAPLVDS+SCYCKVD+GLKTVAGARKFVPGSKLCIQPDINP A
Sbjct: 1    MDQRVEQSPNAQRGFRVQAPLVDSVSCYCKVDSGLKTVAGARKFVPGSKLCIQPDINPHA 60

Query: 1576 HKTKSSRRERTRIQXXXXXXXXXXLAIACLIRVPRVEHNKLRLVCKRWNRLLAGNFFYSL 1397
            HK+K+SRRERTR Q          LAIACLIRVPRVEH KLRLVCKRW+RLL+GNFFYSL
Sbjct: 61   HKSKNSRRERTRFQPPLLPGLPDDLAIACLIRVPRVEHRKLRLVCKRWHRLLSGNFFYSL 120

Query: 1396 RKSLGMAEEWIYVIKRDRDGKISWHAYDPTYQLWQPLPPVPSEYSEAVGFGCAVLSGCHL 1217
            RKSLGMAEEW+YVIKRDRDG+ISWHA+DPTYQLWQPLPPVP EYSEA+GFGCAVLSGC+L
Sbjct: 121  RKSLGMAEEWVYVIKRDRDGRISWHAFDPTYQLWQPLPPVPVEYSEALGFGCAVLSGCNL 180

Query: 1216 YLFGGKDPMKGSMRRVIFYSARTNKWHRAPDMLRKRHFFGSCVINNCLYVAGGECEGIQR 1037
            YLFGGKDPMK S+RRVIFYSARTNKWHRAPDMLRKRHFFGSCVINNCLYVAGGECEGIQR
Sbjct: 181  YLFGGKDPMKRSLRRVIFYSARTNKWHRAPDMLRKRHFFGSCVINNCLYVAGGECEGIQR 240

Query: 1036 TLRSAEVYDPNRNRWNFVSDMSTAMVPFIGVVHDGMWFLKGLGSHREVLSEAYIPGTNSW 857
            TLRSAEVYDPNRNRW+F+SDMSTAMVPFIGV+++G WFLKGLGSHREV+SEAYIP TN+W
Sbjct: 241  TLRSAEVYDPNRNRWSFISDMSTAMVPFIGVIYNGKWFLKGLGSHREVMSEAYIPETNTW 300

Query: 856  TPISDGLVAGWRNPSISMNGKLYALDCRDGCKLRVYDEATNSWRRFIDSKLHLGGSRALE 677
            TPISDG+VAGWRNPSIS+NG+LYALDCRDGCKLRVYD  T+SW +FIDSKLHLG SRALE
Sbjct: 301  TPISDGMVAGWRNPSISLNGQLYALDCRDGCKLRVYDSDTDSWNKFIDSKLHLGSSRALE 360

Query: 676  AAALVPLNGKLCIIRNNXXXXXXXXXSPDKRVESNPQLWENIAGKGHFRTLFTNIWSSLA 497
            AAALVPLNGKLCIIRNN         SPDK VESNP LWENIAGKGHFRTL TN+WSS+A
Sbjct: 361  AAALVPLNGKLCIIRNNMSISIVDVSSPDKHVESNPHLWENIAGKGHFRTLVTNLWSSIA 420

Query: 496  GRNGPKSHIVHCQVLQA 446
            GRN  +SHIVHCQVLQA
Sbjct: 421  GRNSLRSHIVHCQVLQA 437


>ref|XP_002527061.1| Protein AFR, putative [Ricinus communis] gi|223533566|gb|EEF35305.1|
            Protein AFR, putative [Ricinus communis]
          Length = 437

 Score =  767 bits (1980), Expect = 0.0
 Identities = 363/437 (83%), Positives = 391/437 (89%)
 Frame = -2

Query: 1756 MEQSVERPPNAHRGFRVQAPLVDSISCYCKVDAGLKTVAGARKFVPGSKLCIQPDINPRA 1577
            MEQ   +  +A RGFRVQAPLVDS+SCYCKVD+GLKTVA ARKFVPGSKLCIQPDINP A
Sbjct: 1    MEQRQRQSSHAPRGFRVQAPLVDSVSCYCKVDSGLKTVAEARKFVPGSKLCIQPDINPNA 60

Query: 1576 HKTKSSRRERTRIQXXXXXXXXXXLAIACLIRVPRVEHNKLRLVCKRWNRLLAGNFFYSL 1397
            HK+K+ RRERTR+Q          LAIACLIRVPR EH KLRLVCKRW RLLAGNFFYSL
Sbjct: 61   HKSKNLRRERTRVQPPLLPGLPDDLAIACLIRVPRAEHRKLRLVCKRWYRLLAGNFFYSL 120

Query: 1396 RKSLGMAEEWIYVIKRDRDGKISWHAYDPTYQLWQPLPPVPSEYSEAVGFGCAVLSGCHL 1217
            RKSLGMAEEW+YVIKRDRDGKISW+A+DP YQLWQPLPPVP EYSEA+GFGCAVLSGCHL
Sbjct: 121  RKSLGMAEEWVYVIKRDRDGKISWNAFDPIYQLWQPLPPVPREYSEALGFGCAVLSGCHL 180

Query: 1216 YLFGGKDPMKGSMRRVIFYSARTNKWHRAPDMLRKRHFFGSCVINNCLYVAGGECEGIQR 1037
            YLFGGKDP++GSMRRVIFYSARTNKWHRAPDMLRKRHFFGSCVINNCLYVAGGECEGIQR
Sbjct: 181  YLFGGKDPLRGSMRRVIFYSARTNKWHRAPDMLRKRHFFGSCVINNCLYVAGGECEGIQR 240

Query: 1036 TLRSAEVYDPNRNRWNFVSDMSTAMVPFIGVVHDGMWFLKGLGSHREVLSEAYIPGTNSW 857
            TLRSAEVYDPN+NRW+F+SDMSTAMVPFIGVV+DG WFLKGLGSHREVLSEAY P TNSW
Sbjct: 241  TLRSAEVYDPNKNRWSFISDMSTAMVPFIGVVYDGKWFLKGLGSHREVLSEAYDPETNSW 300

Query: 856  TPISDGLVAGWRNPSISMNGKLYALDCRDGCKLRVYDEATNSWRRFIDSKLHLGGSRALE 677
            TPISDG+V GWRNPSIS+NG+LYALDCRDGCKLRVYD AT+SW +FIDSKLHLG S ALE
Sbjct: 301  TPISDGMVGGWRNPSISLNGQLYALDCRDGCKLRVYDGATDSWNKFIDSKLHLGNSHALE 360

Query: 676  AAALVPLNGKLCIIRNNXXXXXXXXXSPDKRVESNPQLWENIAGKGHFRTLFTNIWSSLA 497
            AAALVPLNGKLCI+RNN         SP+K VE+NP LWENIAG+GHFRTL TN+WSS+A
Sbjct: 361  AAALVPLNGKLCIVRNNMSISLVDVSSPEKHVETNPHLWENIAGRGHFRTLVTNLWSSIA 420

Query: 496  GRNGPKSHIVHCQVLQA 446
            GR G KSHIVHCQVLQA
Sbjct: 421  GRGGLKSHIVHCQVLQA 437


>ref|XP_002304010.1| predicted protein [Populus trichocarpa] gi|222841442|gb|EEE78989.1|
            predicted protein [Populus trichocarpa]
          Length = 435

 Score =  751 bits (1940), Expect = 0.0
 Identities = 353/428 (82%), Positives = 385/428 (89%)
 Frame = -2

Query: 1729 NAHRGFRVQAPLVDSISCYCKVDAGLKTVAGARKFVPGSKLCIQPDINPRAHKTKSSRRE 1550
            N  RGFRVQAPLVDS+SCYCKVD+GLKTVA ARKFVPGSKLCIQPDINP AHK+K+SRRE
Sbjct: 8    NGPRGFRVQAPLVDSVSCYCKVDSGLKTVAEARKFVPGSKLCIQPDINPNAHKSKTSRRE 67

Query: 1549 RTRIQXXXXXXXXXXLAIACLIRVPRVEHNKLRLVCKRWNRLLAGNFFYSLRKSLGMAEE 1370
            RTR+Q          LAIACLIRVPR EH KLRLVCKRW RLLAGNFFYSLRKSLGMAEE
Sbjct: 68   RTRVQPPLLPGLPDDLAIACLIRVPRAEHRKLRLVCKRWYRLLAGNFFYSLRKSLGMAEE 127

Query: 1369 WIYVIKRDRDGKISWHAYDPTYQLWQPLPPVPSEYSEAVGFGCAVLSGCHLYLFGGKDPM 1190
            W+YVIKRDRDGKISW+A+DP +Q+WQPLPPVP EYS A+GFGCAVLS CHLYLFGGKDP+
Sbjct: 128  WVYVIKRDRDGKISWNAFDPVHQIWQPLPPVPREYSGALGFGCAVLSSCHLYLFGGKDPL 187

Query: 1189 KGSMRRVIFYSARTNKWHRAPDMLRKRHFFGSCVINNCLYVAGGECEGIQRTLRSAEVYD 1010
            +GSMRRVIFYSARTNKWHRAPDMLRKRHFFGSCVINNCLYVAGGECEGIQRTLRSAEVYD
Sbjct: 188  RGSMRRVIFYSARTNKWHRAPDMLRKRHFFGSCVINNCLYVAGGECEGIQRTLRSAEVYD 247

Query: 1009 PNRNRWNFVSDMSTAMVPFIGVVHDGMWFLKGLGSHREVLSEAYIPGTNSWTPISDGLVA 830
            PN+NRW+F+SDMSTAMVPFIGVV+DG WFLKGLGSHREV+SEAY P T++WTPI+DG+VA
Sbjct: 248  PNKNRWSFISDMSTAMVPFIGVVYDGKWFLKGLGSHREVMSEAYDPETSTWTPINDGMVA 307

Query: 829  GWRNPSISMNGKLYALDCRDGCKLRVYDEATNSWRRFIDSKLHLGGSRALEAAALVPLNG 650
            GWRNPSIS++G LYALDCRDGCKLRVYDEA+++W +FIDSKLHLG S ALEAAALVPLNG
Sbjct: 308  GWRNPSISLDGCLYALDCRDGCKLRVYDEASDTWNKFIDSKLHLGSSHALEAAALVPLNG 367

Query: 649  KLCIIRNNXXXXXXXXXSPDKRVESNPQLWENIAGKGHFRTLFTNIWSSLAGRNGPKSHI 470
            KLCI+RNN         SPDK VESNP LWENIAG+GH RTL TN+WSS+AGR G KSHI
Sbjct: 368  KLCIVRNNMSVSLVDVSSPDKHVESNPHLWENIAGRGHLRTLVTNLWSSIAGRGGLKSHI 427

Query: 469  VHCQVLQA 446
            VHCQVLQA
Sbjct: 428  VHCQVLQA 435


>ref|XP_004142161.1| PREDICTED: F-box/kelch-repeat protein At1g55270-like [Cucumis
            sativus] gi|449533335|ref|XP_004173631.1| PREDICTED:
            F-box/kelch-repeat protein At1g55270-like [Cucumis
            sativus]
          Length = 437

 Score =  751 bits (1939), Expect = 0.0
 Identities = 354/437 (81%), Positives = 388/437 (88%)
 Frame = -2

Query: 1756 MEQSVERPPNAHRGFRVQAPLVDSISCYCKVDAGLKTVAGARKFVPGSKLCIQPDINPRA 1577
            M +SVE    A RG R+QAPLVDS+SCYCKVD+GLKTV GARKFVPGSK+CIQPDINP A
Sbjct: 1    MNESVEPSSRAQRGIRIQAPLVDSVSCYCKVDSGLKTVVGARKFVPGSKICIQPDINPNA 60

Query: 1576 HKTKSSRRERTRIQXXXXXXXXXXLAIACLIRVPRVEHNKLRLVCKRWNRLLAGNFFYSL 1397
            H++K+SRRERTR+Q          LAIACLIRVPRVEH KLRLVCKRW RLL GNF+YSL
Sbjct: 61   HRSKASRRERTRVQPPLLPGLPDDLAIACLIRVPRVEHRKLRLVCKRWYRLLMGNFYYSL 120

Query: 1396 RKSLGMAEEWIYVIKRDRDGKISWHAYDPTYQLWQPLPPVPSEYSEAVGFGCAVLSGCHL 1217
            RKSLGMAEEW+YVIKR+RD +ISWHA+DPTYQLWQ LPPVP EYSEA+GFGCAVLSGCHL
Sbjct: 121  RKSLGMAEEWVYVIKRERDRRISWHAFDPTYQLWQSLPPVPVEYSEALGFGCAVLSGCHL 180

Query: 1216 YLFGGKDPMKGSMRRVIFYSARTNKWHRAPDMLRKRHFFGSCVINNCLYVAGGECEGIQR 1037
            YLFGGKDP+KGSMRRVIFYSARTNKWHRAPDMLRKRH FGSCVINNCLYVAGGECEGIQR
Sbjct: 181  YLFGGKDPIKGSMRRVIFYSARTNKWHRAPDMLRKRHCFGSCVINNCLYVAGGECEGIQR 240

Query: 1036 TLRSAEVYDPNRNRWNFVSDMSTAMVPFIGVVHDGMWFLKGLGSHREVLSEAYIPGTNSW 857
            TLRSAEVYDPN+NRW+F+SDMS+AMVPFIGVVHDG+WFLKGLG+ REV+SEAY P TN+W
Sbjct: 241  TLRSAEVYDPNKNRWSFISDMSSAMVPFIGVVHDGLWFLKGLGTRREVMSEAYSPETNTW 300

Query: 856  TPISDGLVAGWRNPSISMNGKLYALDCRDGCKLRVYDEATNSWRRFIDSKLHLGGSRALE 677
            T +SDG+V+GWRNPSIS+NG+LYALDC+DGCKLRVYD AT+SW RFIDSKLH G SRALE
Sbjct: 301  TTVSDGMVSGWRNPSISLNGQLYALDCQDGCKLRVYDSATDSWNRFIDSKLHFGSSRALE 360

Query: 676  AAALVPLNGKLCIIRNNXXXXXXXXXSPDKRVESNPQLWENIAGKGHFRTLFTNIWSSLA 497
            AAALV LNGKLCIIRNN         SPDKRVESNP LWENIAG+GH RTL TN+ SS+A
Sbjct: 361  AAALVSLNGKLCIIRNNMSISLVDVSSPDKRVESNPHLWENIAGRGHLRTLVTNLLSSIA 420

Query: 496  GRNGPKSHIVHCQVLQA 446
            GRNG KSHIVHCQVLQA
Sbjct: 421  GRNGLKSHIVHCQVLQA 437


>emb|CCH50979.1| T4.18 [Malus x robusta]
          Length = 452

 Score =  745 bits (1923), Expect = 0.0
 Identities = 349/416 (83%), Positives = 374/416 (89%)
 Frame = -2

Query: 1693 VDSISCYCKVDAGLKTVAGARKFVPGSKLCIQPDINPRAHKTKSSRRERTRIQXXXXXXX 1514
            VDS+SCYCKVDAG KTVAGARKFVPGSK+CIQPDINP AH+ K+ RRERTRIQ       
Sbjct: 37   VDSVSCYCKVDAGFKTVAGARKFVPGSKICIQPDINPNAHRGKNLRRERTRIQPPLLPGL 96

Query: 1513 XXXLAIACLIRVPRVEHNKLRLVCKRWNRLLAGNFFYSLRKSLGMAEEWIYVIKRDRDGK 1334
               LAIACLIRVPRVEH KLR+VCKRW  LLAGNFFYSLRKSLGMAEEW+YVIKRDRDG+
Sbjct: 97   PDDLAIACLIRVPRVEHRKLRIVCKRWYHLLAGNFFYSLRKSLGMAEEWVYVIKRDRDGR 156

Query: 1333 ISWHAYDPTYQLWQPLPPVPSEYSEAVGFGCAVLSGCHLYLFGGKDPMKGSMRRVIFYSA 1154
            ISWHA+DPTYQLWQPLPPVP EYS A+GFGCAVLSGCHLYLFGGK P++GSMRRVIFYSA
Sbjct: 157  ISWHAFDPTYQLWQPLPPVPGEYSAALGFGCAVLSGCHLYLFGGKHPLRGSMRRVIFYSA 216

Query: 1153 RTNKWHRAPDMLRKRHFFGSCVINNCLYVAGGECEGIQRTLRSAEVYDPNRNRWNFVSDM 974
            RTNKWHRAPDMLRKRHFFGSCVINNCLYVAGGECEGIQRTLRSAE+YDPN+NRW+F+SDM
Sbjct: 217  RTNKWHRAPDMLRKRHFFGSCVINNCLYVAGGECEGIQRTLRSAEIYDPNKNRWSFISDM 276

Query: 973  STAMVPFIGVVHDGMWFLKGLGSHREVLSEAYIPGTNSWTPISDGLVAGWRNPSISMNGK 794
            STAMVPFIGVVHDGMWFLKGLGSHREV+SEAY P  N+WTPISDG+VAGWRNPSIS+NG+
Sbjct: 277  STAMVPFIGVVHDGMWFLKGLGSHREVMSEAYTPEANTWTPISDGMVAGWRNPSISLNGQ 336

Query: 793  LYALDCRDGCKLRVYDEATNSWRRFIDSKLHLGGSRALEAAALVPLNGKLCIIRNNXXXX 614
            LYALDCRDGCKLRVYD  T+SW +FIDSK+HLG S ALEAAALVPLNGKLCIIRNN    
Sbjct: 337  LYALDCRDGCKLRVYDRVTDSWNKFIDSKVHLGSSCALEAAALVPLNGKLCIIRNNMSIS 396

Query: 613  XXXXXSPDKRVESNPQLWENIAGKGHFRTLFTNIWSSLAGRNGPKSHIVHCQVLQA 446
                 SPDK VESNP LWENIAGKGHFRTL +NIWSS+AGR G KSHIVHCQVLQA
Sbjct: 397  LVDVSSPDKHVESNPHLWENIAGKGHFRTLVSNIWSSIAGRTGLKSHIVHCQVLQA 452


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