BLASTX nr result

ID: Bupleurum21_contig00016279 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016279
         (898 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280997.2| PREDICTED: DDB1- and CUL4-associated factor ...   270   3e-70
emb|CBI20820.3| unnamed protein product [Vitis vinifera]              256   4e-66
ref|XP_003527808.1| PREDICTED: DDB1- and CUL4-associated factor ...   255   9e-66
ref|XP_003523712.1| PREDICTED: DDB1- and CUL4-associated factor ...   253   3e-65
ref|XP_004162499.1| PREDICTED: LOW QUALITY PROTEIN: DDB1- and CU...   249   8e-64

>ref|XP_002280997.2| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Vitis
            vinifera]
          Length = 2024

 Score =  270 bits (690), Expect = 3e-70
 Identities = 154/291 (52%), Positives = 175/291 (60%)
 Frame = +2

Query: 5    SASTSSQTPLSAVPSGLVGDRRISXXXXXXXXXXXXXXEQVFHQAREAVRANNGIKVLLQ 184
            S +++SQTP+  + SGLVGDRRIS              EQ + QAREAVRAN+GIKVLL 
Sbjct: 1069 SINSTSQTPIPTIASGLVGDRRISLGAGAGCAGLAAQLEQGYRQAREAVRANSGIKVLLH 1128

Query: 185  LLQPRVLTPPGALDCLRALACRVLLGLARDDAIAHILTKLQVGKKLSELIRDSGGQSPAS 364
            LLQPR+++PP  LDCLRALACRVLLGLARDDAIAHILTKLQVGKKLSELIRDSG Q+  +
Sbjct: 1129 LLQPRIVSPPATLDCLRALACRVLLGLARDDAIAHILTKLQVGKKLSELIRDSGSQTSGN 1188

Query: 365  EQGRWQAELAQVAIELIAVVTNSGRXXXXXXXXXXXXXLXXXXXXXXXXXTPISYHSREL 544
            EQGRWQAELAQVAIELI +VTNSGR             L           TPI+YHSREL
Sbjct: 1189 EQGRWQAELAQVAIELIGIVTNSGRASTLAATDAATPTLRRIERAAIAAATPITYHSREL 1248

Query: 545  LLLIHEHLQASGLATTAAMLLKEXXXXXXXXXXXXXXXXXXXXGQESPSVQVHWPSRNTS 724
            LLLIHEHLQASGL+TTAA LLKE                     QE+PS+Q+ WPS   +
Sbjct: 1249 LLLIHEHLQASGLSTTAAQLLKEAQLTPLPSLAAPSSLVHQASSQETPSMQLQWPSGRIA 1308

Query: 725  CGFYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFASTLGLQPKVPPTSQD 877
             GF                               F+STL  Q +  P S D
Sbjct: 1309 GGFLSNKLKPTTKDEDSCLNSDSSVSSSKKKPLVFSSTLSFQFRNQPQSHD 1359


>emb|CBI20820.3| unnamed protein product [Vitis vinifera]
          Length = 1760

 Score =  256 bits (655), Expect = 4e-66
 Identities = 153/291 (52%), Positives = 170/291 (58%)
 Frame = +2

Query: 5    SASTSSQTPLSAVPSGLVGDRRISXXXXXXXXXXXXXXEQVFHQAREAVRANNGIKVLLQ 184
            S  TS+    SAV   LVGDRRIS              EQ + QAREAVRAN+GIKVLL 
Sbjct: 896  SVQTSNDRGSSAVLR-LVGDRRISLGAGAGCAGLAAQLEQGYRQAREAVRANSGIKVLLH 954

Query: 185  LLQPRVLTPPGALDCLRALACRVLLGLARDDAIAHILTKLQVGKKLSELIRDSGGQSPAS 364
            LLQPR+++PP  LDCLRALACRVLLGLARDDAIAHILTKLQVGKKLSELIRDSG Q+  +
Sbjct: 955  LLQPRIVSPPATLDCLRALACRVLLGLARDDAIAHILTKLQVGKKLSELIRDSGSQTSGN 1014

Query: 365  EQGRWQAELAQVAIELIAVVTNSGRXXXXXXXXXXXXXLXXXXXXXXXXXTPISYHSREL 544
            EQGRWQAELAQVAIELI +VTNSGR             L           TPI+YHSREL
Sbjct: 1015 EQGRWQAELAQVAIELIGIVTNSGRASTLAATDAATPTLRRIERAAIAAATPITYHSREL 1074

Query: 545  LLLIHEHLQASGLATTAAMLLKEXXXXXXXXXXXXXXXXXXXXGQESPSVQVHWPSRNTS 724
            LLLIHEHLQASGL+TTAA LLKE                     QE+PS+Q+ WPS   +
Sbjct: 1075 LLLIHEHLQASGLSTTAAQLLKEAQLTPLPSLAAPSSLVHQASSQETPSMQLQWPSGRIA 1134

Query: 725  CGFYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFASTLGLQPKVPPTSQD 877
             GF                               F+STL  Q +  P S D
Sbjct: 1135 GGFLSNKLKPTTKDEDSCLNSDSSVSSSKKKPLVFSSTLSFQFRNQPQSHD 1185


>ref|XP_003527808.1| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Glycine
            max]
          Length = 1868

 Score =  255 bits (652), Expect = 9e-66
 Identities = 140/237 (59%), Positives = 155/237 (65%)
 Frame = +2

Query: 23   QTPLSAVPSGLVGDRRISXXXXXXXXXXXXXXEQVFHQAREAVRANNGIKVLLQLLQPRV 202
            QTP+++  SGLVGDRRIS              EQ + QARE VR+NNGIKVLL LLQPR+
Sbjct: 941  QTPVASAASGLVGDRRISLGAGAGCAGLAAQLEQGYRQAREVVRSNNGIKVLLHLLQPRI 1000

Query: 203  LTPPGALDCLRALACRVLLGLARDDAIAHILTKLQVGKKLSELIRDSGGQSPASEQGRWQ 382
             +PP ALDCLRALACRVLLGLARDD IAHILTKLQVGKKLSELIRDSG Q+  +EQGRWQ
Sbjct: 1001 YSPPAALDCLRALACRVLLGLARDDTIAHILTKLQVGKKLSELIRDSGSQTLGTEQGRWQ 1060

Query: 383  AELAQVAIELIAVVTNSGRXXXXXXXXXXXXXLXXXXXXXXXXXTPISYHSRELLLLIHE 562
            AEL+Q AIELI +VTNSGR             L           TPI+YHSRELLLLIHE
Sbjct: 1061 AELSQAAIELIGIVTNSGRASTLAATDAATPTLRRIERAAIAAATPITYHSRELLLLIHE 1120

Query: 563  HLQASGLATTAAMLLKEXXXXXXXXXXXXXXXXXXXXGQESPSVQVHWPSRNTSCGF 733
            HLQASGLA TA+MLLKE                     QE+ S Q+ WPS     GF
Sbjct: 1121 HLQASGLAQTASMLLKEAQLTPLPSLVPPSSLAQQPITQEASSTQIQWPSGRALSGF 1177


>ref|XP_003523712.1| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Glycine
            max]
          Length = 1857

 Score =  253 bits (647), Expect = 3e-65
 Identities = 140/240 (58%), Positives = 155/240 (64%)
 Frame = +2

Query: 14   TSSQTPLSAVPSGLVGDRRISXXXXXXXXXXXXXXEQVFHQAREAVRANNGIKVLLQLLQ 193
            ++ QTP+++  SGLVGDRRIS              EQ + QARE VR+NNGIKVLL LLQ
Sbjct: 927  STPQTPVASASSGLVGDRRISLGAGAGCAGLAAQLEQGYRQAREVVRSNNGIKVLLHLLQ 986

Query: 194  PRVLTPPGALDCLRALACRVLLGLARDDAIAHILTKLQVGKKLSELIRDSGGQSPASEQG 373
            PR+ +PP ALDCLRALACRVLLGLARDD IAHILTKLQVGKKLSELIRDSG  +  +EQG
Sbjct: 987  PRIYSPPAALDCLRALACRVLLGLARDDTIAHILTKLQVGKKLSELIRDSGSLTLGTEQG 1046

Query: 374  RWQAELAQVAIELIAVVTNSGRXXXXXXXXXXXXXLXXXXXXXXXXXTPISYHSRELLLL 553
            RWQAEL+Q AIELI +VTNSGR             L           TPISYHSRELLLL
Sbjct: 1047 RWQAELSQAAIELIGIVTNSGRASTLAATDAATPTLRRIERAAIAAATPISYHSRELLLL 1106

Query: 554  IHEHLQASGLATTAAMLLKEXXXXXXXXXXXXXXXXXXXXGQESPSVQVHWPSRNTSCGF 733
            IHEHLQASGLA TA+MLLKE                     QE  S Q+ WPS     GF
Sbjct: 1107 IHEHLQASGLAQTASMLLKEAQLTPLPSLVPPSSLAQQPITQEVSSTQIQWPSGRAPSGF 1166


>ref|XP_004162499.1| PREDICTED: LOW QUALITY PROTEIN: DDB1- and CUL4-associated factor
            homolog 1-like [Cucumis sativus]
          Length = 1900

 Score =  249 bits (635), Expect = 8e-64
 Identities = 140/243 (57%), Positives = 155/243 (63%)
 Frame = +2

Query: 5    SASTSSQTPLSAVPSGLVGDRRISXXXXXXXXXXXXXXEQVFHQAREAVRANNGIKVLLQ 184
            + S +SQ P+ A  SGLVGDRRIS              EQ + QARE+VRANNGIKVLL 
Sbjct: 960  ATSNNSQNPV-ATTSGLVGDRRISLGAGAGCAGLAAQLEQGYRQARESVRANNGIKVLLH 1018

Query: 185  LLQPRVLTPPGALDCLRALACRVLLGLARDDAIAHILTKLQVGKKLSELIRDSGGQSPAS 364
            LLQPR+  PP ALDCLRALACRVLLGLARDD IAHILTKLQVGKKLSELIRDSG Q   +
Sbjct: 1019 LLQPRIYLPPAALDCLRALACRVLLGLARDDTIAHILTKLQVGKKLSELIRDSGSQISGT 1078

Query: 365  EQGRWQAELAQVAIELIAVVTNSGRXXXXXXXXXXXXXLXXXXXXXXXXXTPISYHSREL 544
            EQGRWQAEL+QVAIELI++VTNSGR             L           TPI+YHSREL
Sbjct: 1079 EQGRWQAELSQVAIELISIVTNSGRASALAASDAATPTLRRIERAAIAAATPITYHSREL 1138

Query: 545  LLLIHEHLQASGLATTAAMLLKEXXXXXXXXXXXXXXXXXXXXGQESPSVQVHWPSRNTS 724
            LLLIHEHL ASGL+  A  LLKE                      E+PS Q+ WP   + 
Sbjct: 1139 LLLIHEHLLASGLSKAAYALLKEAELTPLPHLAAPSSLAYQASKLETPSTQLQWPCGRSP 1198

Query: 725  CGF 733
            CGF
Sbjct: 1199 CGF 1201


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