BLASTX nr result

ID: Bupleurum21_contig00016265 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016265
         (1270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512773.1| dead box ATP-dependent RNA helicase, putativ...   660   0.0  
emb|CBI14965.3| unnamed protein product [Vitis vinifera]              659   0.0  
ref|XP_002277894.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   647   0.0  
ref|XP_002318665.1| predicted protein [Populus trichocarpa] gi|2...   640   0.0  
ref|XP_003525517.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   632   e-179

>ref|XP_002512773.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223547784|gb|EEF49276.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 540

 Score =  660 bits (1703), Expect = 0.0
 Identities = 320/376 (85%), Positives = 354/376 (94%)
 Frame = -1

Query: 1174 SKGDLNNISLPRQDFGNLVPFEKDFYEESPSVRAMTDQEVAVYRARRDITVEGYDVPRPI 995
            S+GDL+NI+LP+QDFGNLVPFEK+FY E+PSV+AM++ EV +YRARRDITVEG+DVP+PI
Sbjct: 165  SRGDLDNIALPKQDFGNLVPFEKNFYIENPSVQAMSEHEVIMYRARRDITVEGHDVPKPI 224

Query: 994  RTFLETNFPAYSLEVFTRLGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLMPAL 815
            R F E NFP Y LEV  +LGFVEPTPIQ+QGWPMALKGRD+IGIAETGSGKTLAY++PAL
Sbjct: 225  RIFQEANFPGYCLEVIAKLGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLAYVLPAL 284

Query: 814  IHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEATKFGSRANIRCTCIYGGAPKGPQIRD 635
            +HVSAQPRLVQGEGP+VL+LAPTRELAVQIQEEA KFGSRANIR TCIYGGAPKGPQIRD
Sbjct: 285  VHVSAQPRLVQGEGPVVLILAPTRELAVQIQEEALKFGSRANIRTTCIYGGAPKGPQIRD 344

Query: 634  LQRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIIAQIRPDR 455
            L RGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRK+++QIRPDR
Sbjct: 345  LHRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKLVSQIRPDR 404

Query: 454  QTLYWSATWPKEVETLARQFLHNPYKVIIGSPVLKANQSINQVIEVVTEVEKYNRLIRLL 275
            QTLYWSATWP+EVETLARQFL NPYKV+IGS  LKANQSINQV+E+V+E+EKYNRLI+LL
Sbjct: 405  QTLYWSATWPREVETLARQFLRNPYKVVIGSTDLKANQSINQVVEIVSEMEKYNRLIKLL 464

Query: 274  KEVMDGSRILIFVETKKGCDHVTRSLRMDGWPALSIHGDKSQDERDWVLAEFKSGRSLIM 95
            KEVMDGSRILIF+ETKKGCD VTR LRMDGWP LSIHGDK+Q ERDWVL+EFKSGRS IM
Sbjct: 465  KEVMDGSRILIFMETKKGCDQVTRQLRMDGWPVLSIHGDKNQTERDWVLSEFKSGRSPIM 524

Query: 94   TATDVAARGLGRITVC 47
            TATDVAARGLGRI +C
Sbjct: 525  TATDVAARGLGRIIMC 540


>emb|CBI14965.3| unnamed protein product [Vitis vinifera]
          Length = 611

 Score =  659 bits (1701), Expect = 0.0
 Identities = 327/376 (86%), Positives = 351/376 (93%)
 Frame = -1

Query: 1174 SKGDLNNISLPRQDFGNLVPFEKDFYEESPSVRAMTDQEVAVYRARRDITVEGYDVPRPI 995
            S+GDL+NI+LP+QDFG+LVPFEK+FY ESPSV+AM++QE  +YRARR+ITVEGYDVP+PI
Sbjct: 236  SRGDLDNIALPKQDFGSLVPFEKNFYIESPSVQAMSEQEAMLYRARREITVEGYDVPKPI 295

Query: 994  RTFLETNFPAYSLEVFTRLGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLMPAL 815
            R F E NFP Y LEV  +LGFVEPTPIQ+QGWPMALKGRDLIGIAETGSGKTLAYL+PAL
Sbjct: 296  RHFQEANFPGYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAL 355

Query: 814  IHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEATKFGSRANIRCTCIYGGAPKGPQIRD 635
            +HVSAQP LV+GEGPIVLVLAPTRELAVQIQEEA KFGS   IR TCIYGGAPKGPQIRD
Sbjct: 356  VHVSAQPPLVRGEGPIVLVLAPTRELAVQIQEEALKFGSFTKIRSTCIYGGAPKGPQIRD 415

Query: 634  LQRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIIAQIRPDR 455
            LQRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKII+QIRPDR
Sbjct: 416  LQRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDR 475

Query: 454  QTLYWSATWPKEVETLARQFLHNPYKVIIGSPVLKANQSINQVIEVVTEVEKYNRLIRLL 275
            QTLYWSATWP+EVETLARQFL NPYKVIIGS  LKANQSI QV+EVVTE EKYNRLIRLL
Sbjct: 476  QTLYWSATWPREVETLARQFLRNPYKVIIGSQDLKANQSIQQVVEVVTETEKYNRLIRLL 535

Query: 274  KEVMDGSRILIFVETKKGCDHVTRSLRMDGWPALSIHGDKSQDERDWVLAEFKSGRSLIM 95
            KEVMDGSRILIF+ETKKGCD VTR +RMDGWP+LSIHGDK+Q ERDWVLAEFKSGRS IM
Sbjct: 536  KEVMDGSRILIFMETKKGCDQVTRQMRMDGWPSLSIHGDKNQAERDWVLAEFKSGRSPIM 595

Query: 94   TATDVAARGLGRITVC 47
            TATDVAARGLGRITVC
Sbjct: 596  TATDVAARGLGRITVC 611


>ref|XP_002277894.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 30-like [Vitis
            vinifera]
          Length = 611

 Score =  647 bits (1668), Expect = 0.0
 Identities = 321/370 (86%), Positives = 345/370 (93%)
 Frame = -1

Query: 1174 SKGDLNNISLPRQDFGNLVPFEKDFYEESPSVRAMTDQEVAVYRARRDITVEGYDVPRPI 995
            S+GDL+NI+LP+QDFG+LVPFEK+FY ESPSV+AM++QE  +YRARR+ITVEGYDVP+PI
Sbjct: 129  SRGDLDNIALPKQDFGSLVPFEKNFYIESPSVQAMSEQEAMLYRARREITVEGYDVPKPI 188

Query: 994  RTFLETNFPAYSLEVFTRLGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLMPAL 815
            R F E NFP Y LEV  +LGFVEPTPIQ+QGWPMALKGRDLIGIAETGSGKTLAYL+PAL
Sbjct: 189  RHFQEANFPGYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAL 248

Query: 814  IHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEATKFGSRANIRCTCIYGGAPKGPQIRD 635
            +HVSAQP LV+GEGPIVLVLAPTRELAVQIQEEA KFGS   IR TCIYGGAPKGPQIRD
Sbjct: 249  VHVSAQPPLVRGEGPIVLVLAPTRELAVQIQEEALKFGSFTKIRSTCIYGGAPKGPQIRD 308

Query: 634  LQRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIIAQIRPDR 455
            LQRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKII+QIRPDR
Sbjct: 309  LQRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDR 368

Query: 454  QTLYWSATWPKEVETLARQFLHNPYKVIIGSPVLKANQSINQVIEVVTEVEKYNRLIRLL 275
            QTLYWSATWP+EVETLARQFL NPYKVIIGS  LKANQSI QV+EVVTE EKYNRLIRLL
Sbjct: 369  QTLYWSATWPREVETLARQFLRNPYKVIIGSQDLKANQSIQQVVEVVTETEKYNRLIRLL 428

Query: 274  KEVMDGSRILIFVETKKGCDHVTRSLRMDGWPALSIHGDKSQDERDWVLAEFKSGRSLIM 95
            KEVMDGSRILIF+ETKKGCD VTR +RMDGWP+LSIHGDK+Q ERDWVLAEFKSGRS IM
Sbjct: 429  KEVMDGSRILIFMETKKGCDQVTRQMRMDGWPSLSIHGDKNQAERDWVLAEFKSGRSPIM 488

Query: 94   TATDVAARGL 65
            TATDVAARGL
Sbjct: 489  TATDVAARGL 498


>ref|XP_002318665.1| predicted protein [Populus trichocarpa] gi|222859338|gb|EEE96885.1|
            predicted protein [Populus trichocarpa]
          Length = 541

 Score =  640 bits (1652), Expect = 0.0
 Identities = 313/369 (84%), Positives = 344/369 (93%)
 Frame = -1

Query: 1171 KGDLNNISLPRQDFGNLVPFEKDFYEESPSVRAMTDQEVAVYRARRDITVEGYDVPRPIR 992
            KG+L+NI+LP+QDFGNLVPFEK+FY E+PS+RA+++ EV +YR RR+ITVEG+DVP+PIR
Sbjct: 61   KGELDNIALPKQDFGNLVPFEKNFYFENPSIRALSEHEVVMYRTRREITVEGHDVPKPIR 120

Query: 991  TFLETNFPAYSLEVFTRLGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLMPALI 812
             F E NFP Y L+V  +LGFVEPTPIQ+QGWPMALKGRDLIGIAETGSGKTLAY++PA +
Sbjct: 121  LFHEANFPDYCLQVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYMLPAFV 180

Query: 811  HVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEATKFGSRANIRCTCIYGGAPKGPQIRDL 632
            HV+AQPRLVQG+GPIVLVLAPTRELAVQIQEE  KFGS ANIR TCIYGGAPKGPQIRDL
Sbjct: 181  HVAAQPRLVQGDGPIVLVLAPTRELAVQIQEEGLKFGSPANIRSTCIYGGAPKGPQIRDL 240

Query: 631  QRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIIAQIRPDRQ 452
            QRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKII+QIRPDRQ
Sbjct: 241  QRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQ 300

Query: 451  TLYWSATWPKEVETLARQFLHNPYKVIIGSPVLKANQSINQVIEVVTEVEKYNRLIRLLK 272
            TLYWSATWP+EVE LARQFLHN YKVIIGS  LKANQSINQV+EV+ ++EKYNRLI+LLK
Sbjct: 301  TLYWSATWPREVEILARQFLHNAYKVIIGSADLKANQSINQVVEVIMDMEKYNRLIKLLK 360

Query: 271  EVMDGSRILIFVETKKGCDHVTRSLRMDGWPALSIHGDKSQDERDWVLAEFKSGRSLIMT 92
            EVMDGSRILIF+ETKKGCD VTR LRMDGWPALSIHGDK+Q ERDWVLAEFKSGRS IMT
Sbjct: 361  EVMDGSRILIFMETKKGCDQVTRQLRMDGWPALSIHGDKNQAERDWVLAEFKSGRSAIMT 420

Query: 91   ATDVAARGL 65
            ATDVAARGL
Sbjct: 421  ATDVAARGL 429


>ref|XP_003525517.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 30-like [Glycine max]
          Length = 599

 Score =  632 bits (1630), Expect = e-179
 Identities = 311/370 (84%), Positives = 341/370 (92%)
 Frame = -1

Query: 1174 SKGDLNNISLPRQDFGNLVPFEKDFYEESPSVRAMTDQEVAVYRARRDITVEGYDVPRPI 995
            S+ DLNNI+LP+QDF NLVPFEK+FY E P+VRAM++QEV  YRA R+ITV+G DVP+P+
Sbjct: 108  SRDDLNNIALPKQDFKNLVPFEKNFYVECPAVRAMSEQEVLHYRASREITVQGNDVPKPV 167

Query: 994  RTFLETNFPAYSLEVFTRLGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLMPAL 815
            R F E NFP Y LEV   LGF EPTPIQ+QGWPMALKGRDLIGIAETGSGKTL+YL+PAL
Sbjct: 168  RMFHEANFPDYCLEVIANLGFAEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAL 227

Query: 814  IHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEATKFGSRANIRCTCIYGGAPKGPQIRD 635
            +HV+AQPRL  G+GPIVLVLAPTRELAVQIQEEA KFGSRAN R TCIYGGAPKGPQIR+
Sbjct: 228  VHVNAQPRLAHGDGPIVLVLAPTRELAVQIQEEALKFGSRANKRSTCIYGGAPKGPQIRE 287

Query: 634  LQRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIIAQIRPDR 455
            L+RGVEIVIATPGRLIDMLEAQHTNL+RVTYLVLDEADRMLDMGFEPQIRKI+AQIRPDR
Sbjct: 288  LKRGVEIVIATPGRLIDMLEAQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVAQIRPDR 347

Query: 454  QTLYWSATWPKEVETLARQFLHNPYKVIIGSPVLKANQSINQVIEVVTEVEKYNRLIRLL 275
            QTL WSATWP+EVETLARQFL NPYKVIIGSP LKANQSINQV+EV+T++EKYNRLIRLL
Sbjct: 348  QTLLWSATWPREVETLARQFLRNPYKVIIGSPYLKANQSINQVVEVLTDMEKYNRLIRLL 407

Query: 274  KEVMDGSRILIFVETKKGCDHVTRSLRMDGWPALSIHGDKSQDERDWVLAEFKSGRSLIM 95
            KEVMDGSRILIF+ETKKGCD VTR +R+DGWPALSIHGDK+Q ERDWVLAEFKSGRS IM
Sbjct: 408  KEVMDGSRILIFMETKKGCDQVTRQMRVDGWPALSIHGDKNQAERDWVLAEFKSGRSPIM 467

Query: 94   TATDVAARGL 65
            TATDVAARGL
Sbjct: 468  TATDVAARGL 477


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