BLASTX nr result

ID: Bupleurum21_contig00016239 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016239
         (732 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264175.1| PREDICTED: probable cytochrome b5 isoform 2 ...   169   4e-40
ref|XP_002893406.1| B5 #6 [Arabidopsis lyrata subsp. lyrata] gi|...   162   9e-38
gb|AAT84461.1| cytochrome b5 isoform Cb5-D [Vernicia fordii]          162   9e-38
ref|XP_002314997.1| predicted protein [Populus trichocarpa] gi|2...   160   2e-37
ref|NP_173958.1| cytochrome B5 isoform A [Arabidopsis thaliana] ...   158   9e-37

>ref|XP_002264175.1| PREDICTED: probable cytochrome b5 isoform 2 [Vitis vinifera]
           gi|297738108|emb|CBI27309.3| unnamed protein product
           [Vitis vinifera]
          Length = 134

 Score =  169 bits (429), Expect = 4e-40
 Identities = 80/124 (64%), Positives = 97/124 (78%)
 Frame = -3

Query: 670 MPTLTKLYSMQEVSEHNSQDDCWLTIDGKVYDVSSYMDEHPGGDDVLLAATGKDATDEFE 491
           MPTLTKL+SMQE S HNS+DDCW+ IDGKVYDV++Y+DEHPGGDDV+LA TGKDATD+FE
Sbjct: 1   MPTLTKLFSMQEASLHNSKDDCWVVIDGKVYDVTTYLDEHPGGDDVILATTGKDATDDFE 60

Query: 490 DAGHSKSARELMESFCIGELEGDSPLIPELEIVSKKQHSDIFKKKNGFWP*SWDYNHEKI 311
           DAGHS  ARELM+SFC+GEL+  SP IPEL+I  KKQ +D+ +K        W  +   +
Sbjct: 61  DAGHSNDARELMKSFCVGELDMSSPAIPELKISDKKQQTDVAQKLLNLTKQYWAVSVAIV 120

Query: 310 GKSV 299
           G SV
Sbjct: 121 GISV 124


>ref|XP_002893406.1| B5 #6 [Arabidopsis lyrata subsp. lyrata]
           gi|297339248|gb|EFH69665.1| B5 #6 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 135

 Score =  162 bits (409), Expect = 9e-38
 Identities = 78/105 (74%), Positives = 89/105 (84%), Gaps = 1/105 (0%)
 Frame = -3

Query: 670 MPTLTKLYSMQEVSEHNSQDDCWLTIDGKVYDVSSYMDEHPGGDDVLLAATGKDATDEFE 491
           MPTLTKLYSM+EV+ HN QDDCW+ IDGKVYDV+SYMDEHPGGDDVLLA TGKDATD+FE
Sbjct: 1   MPTLTKLYSMEEVATHNKQDDCWVVIDGKVYDVTSYMDEHPGGDDVLLAVTGKDATDDFE 60

Query: 490 DAGHSKSARELMESFCIGELEGDS-PLIPELEIVSKKQHSDIFKK 359
           DAGHSK ARELME + IGEL+  S P IPEL+I  K+Q +D  +K
Sbjct: 61  DAGHSKDARELMEKYFIGELDESSLPEIPELKIYKKEQPTDSVQK 105


>gb|AAT84461.1| cytochrome b5 isoform Cb5-D [Vernicia fordii]
          Length = 134

 Score =  162 bits (409), Expect = 9e-38
 Identities = 77/124 (62%), Positives = 96/124 (77%)
 Frame = -3

Query: 670 MPTLTKLYSMQEVSEHNSQDDCWLTIDGKVYDVSSYMDEHPGGDDVLLAATGKDATDEFE 491
           MPTLTKL++MQE ++HN+++DCW+ IDGKVYDVSSY+DEHPGGDDV+L+  GKDATD+FE
Sbjct: 1   MPTLTKLFTMQEAAQHNTKEDCWIVIDGKVYDVSSYLDEHPGGDDVILSTIGKDATDDFE 60

Query: 490 DAGHSKSARELMESFCIGELEGDSPLIPELEIVSKKQHSDIFKKKNGFWP*SWDYNHEKI 311
           DAGHSKSARE +ESF IGEL+   P+IPELEI SKKQ ++  +K        W      +
Sbjct: 61  DAGHSKSAREQLESFFIGELDPSVPVIPELEIYSKKQPAEYVQKLKDLTKQYWAVPVAIV 120

Query: 310 GKSV 299
           G SV
Sbjct: 121 GISV 124


>ref|XP_002314997.1| predicted protein [Populus trichocarpa] gi|222864037|gb|EEF01168.1|
           predicted protein [Populus trichocarpa]
          Length = 132

 Score =  160 bits (405), Expect = 2e-37
 Identities = 74/97 (76%), Positives = 86/97 (88%)
 Frame = -3

Query: 670 MPTLTKLYSMQEVSEHNSQDDCWLTIDGKVYDVSSYMDEHPGGDDVLLAATGKDATDEFE 491
           MPTLTKLY+MQE ++HN+  DCW+ IDGKVYDV SY+DEHPGGDDV+LA TGKDATDEFE
Sbjct: 1   MPTLTKLYTMQEAAQHNTPQDCWVVIDGKVYDVGSYLDEHPGGDDVILATTGKDATDEFE 60

Query: 490 DAGHSKSARELMESFCIGELEGDSPLIPELEIVSKKQ 380
           DAGHSKSAREL+E+F IGEL+  + +IPELEI SKKQ
Sbjct: 61  DAGHSKSARELLETFFIGELDLSATVIPELEISSKKQ 97


>ref|NP_173958.1| cytochrome B5 isoform A [Arabidopsis thaliana]
           gi|9797763|gb|AAF98581.1|AC013427_24 Strong similarity
           to cytochrome b5 from Oryza sativa gb|X75670 and
           contains a Heme-binding PF|00173 domain. EST gb|AV536831
           comes from this gene [Arabidopsis thaliana]
           gi|12083238|gb|AAG48778.1|AF332415_1 putative cytochrome
           b5 protein [Arabidopsis thaliana]
           gi|12321181|gb|AAG50683.1|AC079829_16 cytochrome b5
           [Arabidopsis thaliana] gi|21536989|gb|AAM61330.1|
           cytochrome b5 [Arabidopsis thaliana]
           gi|26450007|dbj|BAC42124.1| putative cytochrome b5
           [Arabidopsis thaliana] gi|332192558|gb|AEE30679.1|
           cytochrome B5 isoform A [Arabidopsis thaliana]
          Length = 135

 Score =  158 bits (400), Expect = 9e-37
 Identities = 77/105 (73%), Positives = 85/105 (80%), Gaps = 1/105 (0%)
 Frame = -3

Query: 670 MPTLTKLYSMQEVSEHNSQDDCWLTIDGKVYDVSSYMDEHPGGDDVLLAATGKDATDEFE 491
           MPTLTKLYSM+E + HN QDDCW+ IDGKVYDVSSYMDEHPGGDDVLLA  GKDATD+FE
Sbjct: 1   MPTLTKLYSMEEAATHNKQDDCWVVIDGKVYDVSSYMDEHPGGDDVLLAVAGKDATDDFE 60

Query: 490 DAGHSKSARELMESFCIGELEGDS-PLIPELEIVSKKQHSDIFKK 359
           DAGHSK ARELME + IGEL+  S P IPEL+I  K Q  D  +K
Sbjct: 61  DAGHSKDARELMEKYFIGELDESSLPEIPELKIYKKDQPQDSVQK 105


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