BLASTX nr result

ID: Bupleurum21_contig00016236 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016236
         (630 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526845.1| conserved hypothetical protein [Ricinus comm...    68   2e-09
ref|XP_004139758.1| PREDICTED: uncharacterized protein LOC101215...    66   5e-09
gb|AED89985.1| PSL1b [Solanum chacoense x Solanum tuberosum]           61   1e-07
gb|AED89984.1| PSL1a [Solanum chacoense x Solanum tuberosum]           61   1e-07
gb|AED89983.1| PSL1 [Solanum chacoense x Solanum tuberosum]            61   1e-07

>ref|XP_002526845.1| conserved hypothetical protein [Ricinus communis]
           gi|223533849|gb|EEF35580.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 789

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 40/110 (36%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
 Frame = -2

Query: 395 FSSIEVYTEEIFTPDKENYTPNTVQRRSIKKSGRVDDIKXXXXXXXXXXXXXXXSWDFVQ 216
           FS ++   EEIFTPDKEN+TPN+  R+  +K G+++DI+                 D   
Sbjct: 396 FSGLQPMDEEIFTPDKENHTPNSFLRK-FRKKGQLEDIQSPKFRYSKITFSSSIGPD--- 451

Query: 215 NEELIFSSDKENHTPKVFQECQAVRTASKKIARLKETATK-NRINRVPFQ 69
            E++I SSDKEN TPK+ Q+ ++ R + +++   +    K  R+ RVP Q
Sbjct: 452 -EDIIASSDKENQTPKILQQRKSARPSRRQMKVEENIVLKERRLERVPLQ 500


>ref|XP_004139758.1| PREDICTED: uncharacterized protein LOC101215438 [Cucumis sativus]
          Length = 1040

 Score = 66.2 bits (160), Expect = 5e-09
 Identities = 41/123 (33%), Positives = 60/123 (48%), Gaps = 1/123 (0%)
 Frame = -2

Query: 434 HRLCGQQISSQETFSSIEVYTEEIFTPDKENYTPNTVQRRSIKKSGRVDDIKXXXXXXXX 255
           H + G++ S   T + ++   EEIFTP+KEN+TPNT+  +S+KK   ++D          
Sbjct: 634 HEIVGEK-SGTNTLAHLDEEEEEIFTPNKENFTPNTLLMKSLKKKASIEDSGNCFRSSKS 692

Query: 254 XXXXXXXSWDFVQNEELIFSSDKENHTPKVFQECQAVRTASKKIARLKETAT-KNRINRV 78
                         EEL   SDKEN TP+V QE +  +   ++    + T T K    R 
Sbjct: 693 QTSIFKSRHKIKLEEELSEESDKENRTPRVLQEQKLSKQFCQRRLEQENTMTKKGGGGRA 752

Query: 77  PFQ 69
           PFQ
Sbjct: 753 PFQ 755


>gb|AED89985.1| PSL1b [Solanum chacoense x Solanum tuberosum]
          Length = 592

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 39/117 (33%), Positives = 57/117 (48%)
 Frame = -2

Query: 419 QQISSQETFSSIEVYTEEIFTPDKENYTPNTVQRRSIKKSGRVDDIKXXXXXXXXXXXXX 240
           + + S    S++   +E+IFTPDKEN TP++   RSIKK G ++++K             
Sbjct: 442 ENVESSTILSNMSKNSEQIFTPDKENMTPDSYSMRSIKK-GNIEEVKQRKPFA------- 493

Query: 239 XXSWDFVQNEELIFSSDKENHTPKVFQECQAVRTASKKIARLKETATKNRINRVPFQ 69
                            KEN   KV +E  +   AS+  AR++ T  KNR +RVPFQ
Sbjct: 494 -----------------KENLNDKVLEEKISASLASRNKARMEVTMLKNRTDRVPFQ 533


>gb|AED89984.1| PSL1a [Solanum chacoense x Solanum tuberosum]
          Length = 823

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 39/117 (33%), Positives = 57/117 (48%)
 Frame = -2

Query: 419 QQISSQETFSSIEVYTEEIFTPDKENYTPNTVQRRSIKKSGRVDDIKXXXXXXXXXXXXX 240
           + + S    S++   +E+IFTPDKEN TP++   RSIKK G ++++K             
Sbjct: 442 ENVESSTILSNMSKNSEQIFTPDKENMTPDSYSMRSIKK-GNIEEVKQRKPFA------- 493

Query: 239 XXSWDFVQNEELIFSSDKENHTPKVFQECQAVRTASKKIARLKETATKNRINRVPFQ 69
                            KEN   KV +E  +   AS+  AR++ T  KNR +RVPFQ
Sbjct: 494 -----------------KENLNDKVLEEKISASLASRNKARMEVTMLKNRTDRVPFQ 533


>gb|AED89983.1| PSL1 [Solanum chacoense x Solanum tuberosum]
          Length = 823

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 39/117 (33%), Positives = 57/117 (48%)
 Frame = -2

Query: 419 QQISSQETFSSIEVYTEEIFTPDKENYTPNTVQRRSIKKSGRVDDIKXXXXXXXXXXXXX 240
           + + S    S++   +E+IFTPDKEN TP++   RSIKK G ++++K             
Sbjct: 442 ENVESSTILSNMSKNSEQIFTPDKENMTPDSYSMRSIKK-GNIEEVKQRKPFA------- 493

Query: 239 XXSWDFVQNEELIFSSDKENHTPKVFQECQAVRTASKKIARLKETATKNRINRVPFQ 69
                            KEN   KV +E  +   AS+  AR++ T  KNR +RVPFQ
Sbjct: 494 -----------------KENLNDKVLEEKISASLASRNKARMEVTMLKNRTDRVPFQ 533


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