BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016234
         (1277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAS82859.1| geranyl diphosphate synthase small subunit [Antir...   220   5e-55
ref|XP_002532570.1| geranyl geranyl pyrophosphate synthase, puta...   219   9e-55
pdb|3QKC|B Chain B, Crystal Structure Of Geranyl Diphosphate Syn...   219   1e-54
dbj|BAF98300.1| geranyl-diphosphate synthase [Hevea brasiliensis]     212   2e-52
gb|AEZ55678.1| geranyl diphosphate synthase small subunit type I...   208   2e-51

>gb|AAS82859.1| geranyl diphosphate synthase small subunit [Antirrhinum majus]
          Length = 297

 Score =  220 bits (561), Expect = 5e-55
 Identities = 123/261 (47%), Positives = 175/261 (67%), Gaps = 7/261 (2%)
 Frame = -2

Query: 1090 RPIVAT---NQSYWSTIDTYIDTHLKNSITIRHPTCVFEPMHHLTFAASKTTAPALCVAA 920
            RP++      Q+Y +TI++ I+++LK +I IR P  VFEPMHHLTFAA +T+A ALCVAA
Sbjct: 29   RPVILAMTRTQTYRATIESDIESYLKKAIPIRAPESVFEPMHHLTFAAPRTSASALCVAA 88

Query: 919  CELVGGSAEDAVTXXXXXXXXXXXAFTHQHLQLTDGPMSSEAHGVKHIYNPNIELLTPDG 740
            CELVGG   DA+            A+TH++L LTDGPMS     ++H ++PNIELLT DG
Sbjct: 89   CELVGGDRSDAMAAAAAVHLMHVAAYTHENLPLTDGPMSKSE--IQHKFDPNIELLTGDG 146

Query: 739  MVPFGFELLGRS-ELARTNSDRILRVIIEISRGIGSQGLVDKMYREMLMHGGEAND-ELF 566
            ++PFG EL+ RS +  R N DRILR IIE++R +GS+G+V+  Y E+ ++  + ND EL 
Sbjct: 147  IIPFGLELMARSMDPTRNNPDRILRAIIELTRVMGSEGIVEGQYHELGLN--QLNDLELI 204

Query: 565  E--DEKKEGELHXXXXXXXXXXXXGSEEEIEKLRKYGQYVGMIQNIIGKSKQGRFEIVSK 392
            E   +KKEG LH              E++IEKLR++G YVG +Q ++GK++ G    + +
Sbjct: 205  EYVCKKKEGTLHACGAACGAILGGCDEDKIEKLRRFGLYVGTVQGLLGKNRSGFEGRIKE 264

Query: 391  LKEMAIKELEIFSGGQRVDQI 329
            LKE+A+KELE F GG++++ I
Sbjct: 265  LKELAVKELESF-GGEKIELI 284


>ref|XP_002532570.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
            gi|223527725|gb|EEF29831.1| geranyl geranyl pyrophosphate
            synthase, putative [Ricinus communis]
          Length = 308

 Score =  219 bits (559), Expect = 9e-55
 Identities = 129/278 (46%), Positives = 173/278 (62%), Gaps = 16/278 (5%)
 Frame = -2

Query: 1099 FHHRPI--VATNQS---YWSTIDTYIDTHLKNSITIRHPTCVFEPMHHLTFAASKTTAPA 935
            F  RP+  V +N S   YW+ I+  I+THLK +I +R P  VFEPMHHLTFAA ++ APA
Sbjct: 31   FSRRPVACVMSNSSKIDYWTCINADIETHLKEAIPVRPPVVVFEPMHHLTFAAPRSFAPA 90

Query: 934  LCVAACELVGGSAEDAVTXXXXXXXXXXXAFTHQHLQLTDGPMSSEAHGVKHIYNPNIEL 755
            LC+AACELVGGS + A+            AFTH+++ LTD P  S      H + PNIEL
Sbjct: 91   LCIAACELVGGSRDQALAAASALRLMIAAAFTHENIPLTDRPRPSARPMFHHTFGPNIEL 150

Query: 754  LTPDGMVPFGFELLGR-SELARTNSDRILRVIIEISRGIGSQGLVDKMYREMLMHGGEAN 578
            LT DGM+PF FELL + +  A+ NSDRILRV+IEISR +GSQG+V+  Y E   +     
Sbjct: 151  LTGDGMIPFAFELLAQLNNPAQDNSDRILRVMIEISRAMGSQGMVEGQYNE-FQYDQSVG 209

Query: 577  DELFE-------DEKKEGELHXXXXXXXXXXXXGSEEEIEKLRKYGQYVGMIQNIIGK-- 425
            DELF         +KKEG  H            G+EEEIEKLR+YG YVG IQ I  K  
Sbjct: 210  DELFHVAWLRDVCKKKEGASHACAGACGAILGGGNEEEIEKLRRYGLYVGTIQGIYNKVE 269

Query: 424  -SKQGRFEIVSKLKEMAIKELEIFSGGQRVDQISTLLD 314
             +++   + V+KL+++A+KEL+ F+  ++V  I +L++
Sbjct: 270  GNEEWSLKEVNKLRDLALKELKDFNEEEKVRAICSLVE 307


>pdb|3QKC|B Chain B, Crystal Structure Of Geranyl Diphosphate Synthase Small
            Subunit From Antirrhinum Majus gi|323463188|pdb|3QKC|A
            Chain A, Crystal Structure Of Geranyl Diphosphate
            Synthase Small Subunit From Antirrhinum Majus
          Length = 273

 Score =  219 bits (558), Expect = 1e-54
 Identities = 121/251 (48%), Positives = 171/251 (68%), Gaps = 4/251 (1%)
 Frame = -2

Query: 1069 QSYWSTIDTYIDTHLKNSITIRHPTCVFEPMHHLTFAASKTTAPALCVAACELVGGSAED 890
            Q+Y +TI++ I+++LK +I IR P  VFEPMHHLTFAA +T+A ALCVAACELVGG   D
Sbjct: 7    QTYRATIESDIESYLKKAIPIRAPESVFEPMHHLTFAAPRTSASALCVAACELVGGDRSD 66

Query: 889  AVTXXXXXXXXXXXAFTHQHLQLTDGPMSSEAHGVKHIYNPNIELLTPDGMVPFGFELLG 710
            A+            A+TH++L LTDGPMS     ++H ++PNIELLT DG++PFG EL+ 
Sbjct: 67   AMAAAAAVHLMHVAAYTHENLPLTDGPMSKSE--IQHKFDPNIELLTGDGIIPFGLELMA 124

Query: 709  RS-ELARTNSDRILRVIIEISRGIGSQGLVDKMYREMLMHGGEAND-ELFE--DEKKEGE 542
            RS +  R N DRILR IIE++R +GS+G+V+  Y E+ ++  + ND EL E   +KKEG 
Sbjct: 125  RSMDPTRNNPDRILRAIIELTRVMGSEGIVEGQYHELGLN--QLNDLELIEYVCKKKEGT 182

Query: 541  LHXXXXXXXXXXXXGSEEEIEKLRKYGQYVGMIQNIIGKSKQGRFEIVSKLKEMAIKELE 362
            LH              E++IEKLR++G YVG +Q ++GK++ G    + +LKE+A+KELE
Sbjct: 183  LHACGAACGAILGGCDEDKIEKLRRFGLYVGTVQGLLGKNRSGFEGRIKELKELAVKELE 242

Query: 361  IFSGGQRVDQI 329
             F GG++++ I
Sbjct: 243  SF-GGEKIELI 252


>dbj|BAF98300.1| geranyl-diphosphate synthase [Hevea brasiliensis]
          Length = 306

 Score =  212 bits (539), Expect = 2e-52
 Identities = 127/282 (45%), Positives = 172/282 (60%), Gaps = 15/282 (5%)
 Frame = -2

Query: 1114 HPSRP-FHHRPIV---ATNQSYWSTIDTYIDTHLKNSITIRHPTCVFEPMHHLTFAASKT 947
            +P  P F HRP+V   +T+QSYWS+++  +DTHLK +I IR P  VFEPM HL  +A +T
Sbjct: 22   NPKHPLFSHRPMVVAMSTDQSYWSSVNADLDTHLKQAIPIRQPLAVFEPMRHLILSAPQT 81

Query: 946  TAPALCVAACELVGGSAEDAVTXXXXXXXXXXXAFTHQHLQLTDGPMSSEAHGVKHIYNP 767
            +APALC+AACELVGG    A+            A TH++L LTD P          +Y P
Sbjct: 82   SAPALCIAACELVGGHRNQAMAAASALRLVHASASTHENLPLTDRPRPM-PRTRPTLYGP 140

Query: 766  NIELLTPDGMVPFGFELLGR-SELARTNSDRILRVIIEISRGIGSQGLVDKMYREMLMHG 590
            NIELL  DG++P+GFELL R  + A  NS+R+LR IIEISR +GSQG+++  Y E     
Sbjct: 141  NIELLIADGIIPYGFELLARDDDAAENNSNRVLRAIIEISRAMGSQGVIEGQYNESQYEE 200

Query: 589  GEANDELFE-------DEKKEGELHXXXXXXXXXXXXGSEEEIEKLRKYGQYVGMIQNII 431
             E  +E+F          KKEG LH            GSE+EIEKLR+YG YVGM+Q I+
Sbjct: 201  SE-GEEIFHVGWLQNVCRKKEGTLHACAGACGAILGGGSEDEIEKLRRYGLYVGMVQGIL 259

Query: 430  GK---SKQGRFEIVSKLKEMAIKELEIFSGGQRVDQISTLLD 314
             K    K+   + V+KL+++A+KEL+ F+   +V  IS L++
Sbjct: 260  SKVDERKEWPVKEVNKLRDLALKELKDFNQA-KVKTISILVE 300


>gb|AEZ55678.1| geranyl diphosphate synthase small subunit type I [Salvia
            miltiorrhiza]
          Length = 314

 Score =  208 bits (530), Expect = 2e-51
 Identities = 117/250 (46%), Positives = 148/250 (59%), Gaps = 5/250 (2%)
 Frame = -2

Query: 1084 IVATNQSYWSTIDTYIDTHLKNSITIRHPTCVFEPMHHLTFAASKTTAPALCVAACELVG 905
            +VA N SYW+ I+  IDT+LK SI IR P  VFEPMHHLTFAA +T A A+CVAACELVG
Sbjct: 43   VVAQNHSYWAAIEADIDTYLKKSIAIRSPETVFEPMHHLTFAAPRTAASAICVAACELVG 102

Query: 904  GSAEDAVTXXXXXXXXXXXAFTHQHLQLTDGPMSSEAHGVKHIYNPNIELLTPDGMVPFG 725
            G    A+            A+ H+HL LTD P  +    ++H Y PNIELLT DGM  FG
Sbjct: 103  GERSQAIATASAIHIMHAAAYAHEHLPLTDRPRPNSKPAIQHKYGPNIELLTGDGMASFG 162

Query: 724  FELL-GRSELARTNSDRILRVIIEISRGIGSQGLVDKMYREMLMHGGEANDELFE--DEK 554
            FELL G       N +RILRVIIEISR  GS+G++D  YRE  +    +  +  E    K
Sbjct: 163  FELLAGSIRSDHPNPERILRVIIEISRASGSEGIIDGFYREKEIVDQHSRFDFIEYLCRK 222

Query: 553  KEGELHXXXXXXXXXXXXGSEEEIEKLRKYGQYVGMIQNIIGK--SKQGRFEIVSKLKEM 380
            K GE+H            G+EEEI+KLR +G Y G +  ++ K         ++ KLK++
Sbjct: 223  KYGEMHACAAASGAILAGGAEEEIQKLRNFGHYAGTLIGLLHKKIDTPQIQNVIGKLKDL 282

Query: 379  AIKELEIFSG 350
            A+KELE F G
Sbjct: 283  ALKELEGFHG 292