BLASTX nr result
ID: Bupleurum21_contig00016231
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00016231
(2339 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003634022.1| PREDICTED: pentatricopeptide repeat-containi... 1088 0.0
ref|XP_002528404.1| pentatricopeptide repeat-containing protein,... 1045 0.0
ref|XP_002869359.1| pentatricopeptide repeat-containing protein ... 1017 0.0
ref|XP_004146719.1| PREDICTED: pentatricopeptide repeat-containi... 1013 0.0
ref|NP_567856.1| pentatricopeptide repeat-containing protein [Ar... 999 0.0
>ref|XP_003634022.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
chloroplastic-like [Vitis vinifera]
gi|297745081|emb|CBI38673.3| unnamed protein product
[Vitis vinifera]
Length = 900
Score = 1088 bits (2813), Expect = 0.0
Identities = 530/740 (71%), Positives = 623/740 (84%)
Frame = -3
Query: 2334 WMRSNEKLKQNVNAYKVALRVLGRRQD*DGAEVMIQEMVGESGCKLNFQVFNTLIYACNK 2155
WMR N KL+ NV+AY +ALRVLGRR D D AE MI EM G+S C++NFQV+NTLIYAC K
Sbjct: 161 WMRENGKLEGNVSAYNLALRVLGRRGDWDAAETMIWEMNGDSDCQVNFQVYNTLIYACYK 220
Query: 2154 QGFAELGGKWFRMMLGMGVRPNVATIGMLMSLYQKRLVVQEAEFTFSQMRRCKIMCESAY 1975
QG ELG KWFR+ML GVRPNVAT GM+MSLYQK V ++E+ FSQMR I C+SAY
Sbjct: 221 QGHVELGTKWFRLMLENGVRPNVATFGMVMSLYQKGWNVADSEYAFSQMRSFGITCQSAY 280
Query: 1974 SAMITIYTRLRLYDKAEQVIGLLKEDDVVMNKENWLVLINAYCQQGKLEKAELALISMQE 1795
SAMITIYTR+ LYDKAE+VI ++ED V++N ENWLVL+NAY QQGKL++AE L SMQ
Sbjct: 281 SAMITIYTRMSLYDKAEEVIDFIQEDKVILNLENWLVLLNAYSQQGKLQEAERVLFSMQN 340
Query: 1794 AGFPPHIVAYNTLITGYGKVFNMDAARLLFENLEKVGLKPDETTYRSMIEGWGRVDNYKE 1615
AGF P+IVAYN LITGYGK NMDAA+ +F NL+ VGL+PDE+TYRSMIEGWGR +NYKE
Sbjct: 341 AGFSPNIVAYNMLITGYGKASNMDAAQHIFRNLKNVGLEPDESTYRSMIEGWGRAENYKE 400
Query: 1614 AEWYYKELEFLGFSPNASNLHTMLNLQAKHEDEEGAIKTLNKMITMDCEYTSVLGILIQA 1435
AEWYY EL+ LGF PN+SNL+TM+NLQAK+ D E A +TL+ M + C+Y+SVLG L+QA
Sbjct: 401 AEWYYNELKRLGFKPNSSNLYTMINLQAKYADGEDAARTLDDMKRIGCQYSSVLGTLLQA 460
Query: 1434 YERAGKFDKVPSVLTGLFYEHVLVNQTSCSILVMAYVKHSLVTDAVKVLHEKRWKDPIFE 1255
YERAG+ D+VP +L G FYE+VLVNQTSCSILVMAYVKH LV DA+KVL EK+WKD IFE
Sbjct: 461 YERAGRIDRVPLILKGSFYEYVLVNQTSCSILVMAYVKHCLVDDAIKVLQEKQWKDTIFE 520
Query: 1254 DNLYHLLICSCKELGHLEDAVTIYASMRSSSKPNVHIMSTMIDIYTVMNRFEEAENIYLK 1075
DNLYHL+ICSCKELG LE+AV IY+ M + KPN+HIM TMIDIY+ + RF +AEN+YLK
Sbjct: 521 DNLYHLVICSCKELGRLENAVKIYSQM-PNKKPNLHIMCTMIDIYSTLGRFSDAENLYLK 579
Query: 1074 LNSSGVTLDMIAFSIVVRMYVKSGSLKDACSVLDSMENRSDIHPDVYLLRDMLRIYQRLD 895
L SS ++LDMIAFSIVVRMYVKSGSLKDACSVL++M+ + +I PD+YL DMLRIYQ+
Sbjct: 580 LKSSEISLDMIAFSIVVRMYVKSGSLKDACSVLETMDEQKNIVPDIYLFCDMLRIYQQCG 639
Query: 894 RRDKLSDLYYKILKTGTPLDQEMYNCIINCCARALPVDELSRVFDEMLERGFEPNTFTFN 715
DKL DLYY+ILKTG D EMYNC+INCCARALPVDELSR+FDEML GF PNT T N
Sbjct: 640 MLDKLQDLYYRILKTGVTWDSEMYNCVINCCARALPVDELSRLFDEMLLHGFAPNTITLN 699
Query: 714 VMLDVYGKCRLFKKVRRIYLMAKRRGLVDVISYNTIIASYGKGKNLRKMSSAVKEMKFSG 535
VMLDVYGK RLFKK R++ +A++RGLVDVISYNTIIA+YG+ K+L+KM S V++M+F+G
Sbjct: 700 VMLDVYGKSRLFKKARKVLWLARKRGLVDVISYNTIIAAYGQSKDLKKMLSTVRQMQFNG 759
Query: 534 FSVSLEAYNSMLDAYGKEDKMEKFRDVLQRMKESSCTSDHYTYNTMINIYGEKGWIEEVS 355
FSVSLE YN MLD+YGKE ++E FR VL+RMKESSC SDHYTYN MINIYGE+GWIEEV+
Sbjct: 760 FSVSLEVYNCMLDSYGKEGQIESFRSVLRRMKESSCASDHYTYNIMINIYGEQGWIEEVA 819
Query: 354 GVLVQLKESGLGPDLCSYNTLIKAYGIAGMVDDAVSLVKEMREKGVEPDKVTYTNLVTAL 175
VL +LKESGLGPDLCSYNTLIKAYGIAGMV+DAV LVKEMRE G++PD++TY NL+ AL
Sbjct: 820 NVLTELKESGLGPDLCSYNTLIKAYGIAGMVEDAVVLVKEMRENGIQPDRITYINLINAL 879
Query: 174 RKNDMFLEAVKWSLWMKQMG 115
RKND FLEAVKWSLWMKQMG
Sbjct: 880 RKNDEFLEAVKWSLWMKQMG 899
Score = 90.1 bits (222), Expect = 2e-15
Identities = 56/240 (23%), Positives = 111/240 (46%)
Frame = -3
Query: 831 EMYNCIINCCARALPVDELSRVFDEMLERGFEPNTFTFNVMLDVYGKCRLFKKVRRIYLM 652
++YN +I C + V+ ++ F MLE G PN TF +++ +Y
Sbjct: 209 QVYNTLIYACYKQGHVELGTKWFRLMLENGVRPNVATFGMVMSLYQ-------------- 254
Query: 651 AKRRGLVDVISYNTIIASYGKGKNLRKMSSAVKEMKFSGFSVSLEAYNSMLDAYGKEDKM 472
KG N+ A +M+ G + AY++M+ Y +
Sbjct: 255 --------------------KGWNVADSEYAFSQMRSFGITCQ-SAYSAMITIYTRMSLY 293
Query: 471 EKFRDVLQRMKESSCTSDHYTYNTMINIYGEKGWIEEVSGVLVQLKESGLGPDLCSYNTL 292
+K +V+ ++E + + ++N Y ++G ++E VL ++ +G P++ +YN L
Sbjct: 294 DKAEEVIDFIQEDKVILNLENWLVLLNAYSQQGKLQEAERVLFSMQNAGFSPNIVAYNML 353
Query: 291 IKAYGIAGMVDDAVSLVKEMREKGVEPDKVTYTNLVTALRKNDMFLEAVKWSLWMKQMGF 112
I YG A +D A + + ++ G+EPD+ TY +++ + + + EA + +K++GF
Sbjct: 354 ITGYGKASNMDAAQHIFRNLKNVGLEPDESTYRSMIEGWGRAENYKEAEWYYNELKRLGF 413
>ref|XP_002528404.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223532192|gb|EEF33997.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 955
Score = 1045 bits (2703), Expect = 0.0
Identities = 505/741 (68%), Positives = 619/741 (83%), Gaps = 1/741 (0%)
Frame = -3
Query: 2334 WMRSNEKLKQNVNAYKVALRVLGRRQD*DGAEVMIQEMVGESGCKLNFQVFNTLIYACNK 2155
WMR+N KL++N+NAY V LRVLGRR+D AE MI E+ G +L+F+VFNTLIYAC++
Sbjct: 214 WMRNNGKLEKNLNAYNVILRVLGRREDWGTAERMIGEVSDSFGSELDFRVFNTLIYACSR 273
Query: 2154 QGFAELGGKWFRMMLGMGVRPNVATIGMLMSLYQKRLVVQEAEFTFSQMRRCKIMCESAY 1975
+G LGGKWFRMML +GV+PN+AT GMLM LYQK V+EAEF FS+MR I+C+SAY
Sbjct: 274 RGNMLLGGKWFRMMLELGVQPNIATFGMLMGLYQKGWNVEEAEFVFSKMRSFGIICQSAY 333
Query: 1974 SAMITIYTRLRLYDKAEQVIGLLKEDDVVMNKENWLVLINAYCQQGKLEKAELALISMQE 1795
SAMITIYTRL LY+KAE++IGL+ ED V MN ENWLVL+NAY QQG+LE+AE L+ MQE
Sbjct: 334 SAMITIYTRLSLYNKAEEIIGLMGEDKVAMNVENWLVLLNAYSQQGRLEEAEQVLVEMQE 393
Query: 1794 AGFPPHIVAYNTLITGYGKVFNMDAARLLFENLEKVGLKPDETTYRSMIEGWGRVDNYKE 1615
A F P+IVA+NTLITGYGK+ NM AA+ LF +++ GL+PDETTYRSMIEGWGR NYKE
Sbjct: 394 ASFSPNIVAFNTLITGYGKLSNMAAAQRLFLDIQNAGLEPDETTYRSMIEGWGRTGNYKE 453
Query: 1614 AEWYYKELEFLGFSPNASNLHTMLNLQAKHEDEEGAIKTLNKMITMDCEYTSVLGILIQA 1435
AEWYYKEL+ LG+ PN+SNL+T++NLQAKH+D+EGAI TL+ M+ + C+++S+LG L++A
Sbjct: 454 AEWYYKELKRLGYMPNSSNLYTLINLQAKHDDDEGAIGTLDDMLKIGCQHSSILGTLLKA 513
Query: 1434 YERAGKFDKVPSVLTGLFYEHVLVNQTSCSILVMAYVKHSLVTDAVKVLHEKRWKDPIFE 1255
YE+AG+ +KVP +L FY+HVLVNQTSCSILVM YVK+ LV +A+KVL +K+WKD FE
Sbjct: 514 YEKAGRINKVPLLLKDSFYQHVLVNQTSCSILVMTYVKNCLVDEALKVLGDKKWKDQTFE 573
Query: 1254 DNLYHLLICSCKELGHLEDAVTIYASM-RSSSKPNVHIMSTMIDIYTVMNRFEEAENIYL 1078
DNLYHLLICSCKELG+LE AV IY M +S KPN+HI T+IDIY+V+ F EAE +Y
Sbjct: 574 DNLYHLLICSCKELGNLESAVRIYTQMPKSEDKPNLHISCTVIDIYSVLGCFAEAEKLYQ 633
Query: 1077 KLNSSGVTLDMIAFSIVVRMYVKSGSLKDACSVLDSMENRSDIHPDVYLLRDMLRIYQRL 898
+L SG+ LDM+AFSIVVRMYVK+GSLKDACSVL +ME + +I PD+YL RDMLRIYQ+
Sbjct: 634 QLKCSGIALDMVAFSIVVRMYVKAGSLKDACSVLATMEKQENIIPDIYLYRDMLRIYQQC 693
Query: 897 DRRDKLSDLYYKILKTGTPLDQEMYNCIINCCARALPVDELSRVFDEMLERGFEPNTFTF 718
KL DLY+KILK+ DQE+YNCIINCCARALPV ELSR+F EML+RGF PNT TF
Sbjct: 694 GMMSKLKDLYHKILKSEVDWDQELYNCIINCCARALPVGELSRLFSEMLQRGFSPNTITF 753
Query: 717 NVMLDVYGKCRLFKKVRRIYLMAKRRGLVDVISYNTIIASYGKGKNLRKMSSAVKEMKFS 538
NVMLDVYGK +LF K + ++ MA++RGLVDVISYNT+IA+YG K+ + M+SAV+ M+F
Sbjct: 754 NVMLDVYGKAKLFNKAKELFWMARKRGLVDVISYNTVIAAYGHNKDFKNMASAVRNMQFD 813
Query: 537 GFSVSLEAYNSMLDAYGKEDKMEKFRDVLQRMKESSCTSDHYTYNTMINIYGEKGWIEEV 358
GFSVSLEAYN MLD YGKE +ME FR+VLQRMK+SS TSDHYTYN MINIYGE+GWI+EV
Sbjct: 814 GFSVSLEAYNCMLDGYGKEGQMECFRNVLQRMKQSSYTSDHYTYNIMINIYGEQGWIDEV 873
Query: 357 SGVLVQLKESGLGPDLCSYNTLIKAYGIAGMVDDAVSLVKEMREKGVEPDKVTYTNLVTA 178
+GVL +L+E GL PDLCSYNTLIKAYG+AGMV+DA+ LVKEMRE G+EPDK+TY+NL+TA
Sbjct: 874 AGVLTELRECGLRPDLCSYNTLIKAYGVAGMVEDAIDLVKEMRENGIEPDKITYSNLITA 933
Query: 177 LRKNDMFLEAVKWSLWMKQMG 115
L+KND +LEAVKWSLWMKQ+G
Sbjct: 934 LQKNDKYLEAVKWSLWMKQLG 954
Score = 88.2 bits (217), Expect = 9e-15
Identities = 57/246 (23%), Positives = 112/246 (45%)
Frame = -3
Query: 849 GTPLDQEMYNCIINCCARALPVDELSRVFDEMLERGFEPNTFTFNVMLDVYGKCRLFKKV 670
G+ LD ++N +I C+R + + F MLE G +PN TF +++ +Y K
Sbjct: 256 GSELDFRVFNTLIYACSRRGNMLLGGKWFRMMLELGVQPNIATFGMLMGLYQK------- 308
Query: 669 RRIYLMAKRRGLVDVISYNTIIASYGKGKNLRKMSSAVKEMKFSGFSVSLEAYNSMLDAY 490
G N+ + +M+ G + AY++M+ Y
Sbjct: 309 ---------------------------GWNVEEAEFVFSKMRSFGI-ICQSAYSAMITIY 340
Query: 489 GKEDKMEKFRDVLQRMKESSCTSDHYTYNTMINIYGEKGWIEEVSGVLVQLKESGLGPDL 310
+ K +++ M E + + ++N Y ++G +EE VLV+++E+ P++
Sbjct: 341 TRLSLYNKAEEIIGLMGEDKVAMNVENWLVLLNAYSQQGRLEEAEQVLVEMQEASFSPNI 400
Query: 309 CSYNTLIKAYGIAGMVDDAVSLVKEMREKGVEPDKVTYTNLVTALRKNDMFLEAVKWSLW 130
++NTLI YG + A L +++ G+EPD+ TY +++ + + EA +
Sbjct: 401 VAFNTLITGYGKLSNMAAAQRLFLDIQNAGLEPDETTYRSMIEGWGRTGNYKEAEWYYKE 460
Query: 129 MKQMGF 112
+K++G+
Sbjct: 461 LKRLGY 466
Score = 85.5 bits (210), Expect = 6e-14
Identities = 119/617 (19%), Positives = 246/617 (39%), Gaps = 51/617 (8%)
Frame = -3
Query: 2331 MRSNEKLKQNVNAYKVALRVLGRRQD*DGAEVMIQEMVGESGCKLNFQVFNTLIYACNKQ 2152
+ +K+ NV + V L ++ + AE ++ EM E+ N FNTLI K
Sbjct: 355 LMGEDKVAMNVENWLVLLNAYSQQGRLEEAEQVLVEMQ-EASFSPNIVAFNTLITGYGKL 413
Query: 2151 GFAELGGKWFRMMLGMGVRPNVATIGMLMSLYQKRLVVQEAEFTFSQMRRCKIMCESAYS 1972
+ F + G+ P+ T ++ + + +EAE+ + +++R M S+
Sbjct: 414 SNMAAAQRLFLDIQNAGLEPDETTYRSMIEGWGRTGNYKEAEWYYKELKRLGYMPNSS-- 471
Query: 1971 AMITIYTRLRL---YDKAEQVIGLLKEDDVVMNKENWLV--LINAYCQQGKLEKAELALI 1807
+YT + L +D E IG L + + + + ++ L+ AY + G++ K L L
Sbjct: 472 ---NLYTLINLQAKHDDDEGAIGTLDDMLKIGCQHSSILGTLLKAYEKAGRINKVPLLL- 527
Query: 1806 SMQEAGFPPHIVAYNT----LITGYGKVFNMDAARLLFENLEKVGLKPDETTYRSMIEGW 1639
+ F H++ T L+ Y K +D A + + + ++ Y +I
Sbjct: 528 ---KDSFYQHVLVNQTSCSILVMTYVKNCLVDEALKVLGDKKWKDQTFEDNLYHLLICSC 584
Query: 1638 GRVDNYKEAEWYYKELEFLGFSPNAS------NLHTMLNLQAKHEDEEGAIKTLNKMITM 1477
+ N + A Y ++ PN +++++L A+ E +K + M
Sbjct: 585 KELGNLESAVRIYTQMPKSEDKPNLHISCTVIDIYSVLGCFAEAEKLYQQLKCSGIALDM 644
Query: 1476 DCEYTSVLGILIQAYERAGKFDKVPSVLTGLFYEHVLVNQTSCSILVMAYVKHSLVTDAV 1297
I+++ Y +AG SVL + + ++ ++ + + +
Sbjct: 645 -----VAFSIVVRMYVKAGSLKDACSVLATMEKQENIIPDIYLYRDMLRIYQQCGMMSKL 699
Query: 1296 KVLHEKRWKDPI-FEDNLYHLLICSCKELGHLEDAVTIYASM-RSSSKPNVHIMSTMIDI 1123
K L+ K K + ++ LY+ +I C + + +++ M + PN + M+D+
Sbjct: 700 KDLYHKILKSEVDWDQELYNCIINCCARALPVGELSRLFSEMLQRGFSPNTITFNVMLDV 759
Query: 1122 YTVMNRFEEAENIYLKLNSSGVTLDMIAFSIVVRMYVKSGSLKDACSVLDSME------- 964
Y F +A+ ++ G+ +D+I+++ V+ Y + K+ S + +M+
Sbjct: 760 YGKAKLFNKAKELFWMARKRGL-VDVISYNTVIAAYGHNKDFKNMASAVRNMQFDGFSVS 818
Query: 963 ---------------------------NRSDIHPDVYLLRDMLRIYQRLDRRDKLSDLYY 865
+S D Y M+ IY D+++ +
Sbjct: 819 LEAYNCMLDGYGKEGQMECFRNVLQRMKQSSYTSDHYTYNIMINIYGEQGWIDEVAGVLT 878
Query: 864 KILKTGTPLDQEMYNCIINCCARALPVDELSRVFDEMLERGFEPNTFTFNVMLDVYGKCR 685
++ + G D YN +I A V++ + EM E G EP+ T++ ++ K
Sbjct: 879 ELRECGLRPDLCSYNTLIKAYGVAGMVEDAIDLVKEMRENGIEPDKITYSNLITALQKND 938
Query: 684 LFKKVRRIYLMAKRRGL 634
+ + + L K+ GL
Sbjct: 939 KYLEAVKWSLWMKQLGL 955
>ref|XP_002869359.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297315195|gb|EFH45618.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 906
Score = 1017 bits (2629), Expect = 0.0
Identities = 493/741 (66%), Positives = 602/741 (81%), Gaps = 1/741 (0%)
Frame = -3
Query: 2334 WMRSNEKLKQNVNAYKVALRVLGRRQD*DGAEVMIQEMVGESGCKLNFQVFNTLIYACNK 2155
WMR KL+ N AY + LRVLGRR++ + AE +I+E+ G G + +FQVFNT+IYAC K
Sbjct: 165 WMRCKGKLEGNFGAYSLILRVLGRREEWNRAEDLIEELCGFQGFQQSFQVFNTVIYACTK 224
Query: 2154 QGFAELGGKWFRMMLGMGVRPNVATIGMLMSLYQKRLVVQEAEFTFSQMRRCKIMCESAY 1975
+G +L KWF+MML +GVRPNVATIGMLM LYQK V EAEF FS MR+ +I+CESAY
Sbjct: 225 KGNVKLASKWFQMMLELGVRPNVATIGMLMGLYQKNWNVDEAEFAFSHMRKFEIVCESAY 284
Query: 1974 SAMITIYTRLRLYDKAEQVIGLLKEDDVVMNKENWLVLINAYCQQGKLEKAELALISMQE 1795
S+MITIYTRLRLY+KAE+VI L+K+D V + ENWLV++NAY QQGK+E+AE LISM+
Sbjct: 285 SSMITIYTRLRLYEKAEEVINLMKQDRVRLKLENWLVMLNAYSQQGKMEQAESVLISMEA 344
Query: 1794 AGFPPHIVAYNTLITGYGKVFNMDAARLLFENLEKVGLKPDETTYRSMIEGWGRVDNYKE 1615
AGF P+I+AYNTLITGYGKV M+AA+ LF L +GL+PDET+YRSMIEGWGR DNY+E
Sbjct: 345 AGFAPNIIAYNTLITGYGKVSKMEAAKSLFHRLSDIGLEPDETSYRSMIEGWGRADNYEE 404
Query: 1614 AEWYYKELEFLGFSPNASNLHTMLNLQAKHEDEEGAIKTLNKMITMDCEYTSVLGILIQA 1435
A YY+EL+ G+ PN+SNL T++NLQAK+ D +GAIKT+ M ++ C+Y S+LGI++QA
Sbjct: 405 ANHYYQELKRCGYKPNSSNLFTLINLQAKYGDRDGAIKTIEDMTSIGCQYPSILGIILQA 464
Query: 1434 YERAGKFDKVPSVLTGLFYEHVLVNQTSCSILVMAYVKHSLVTDAVKVLHEKRWKDPIFE 1255
YE+ GK D VP +L G F+ H+ +NQTS SILVMAY+KH +V D + +L EK+W+D FE
Sbjct: 465 YEKVGKIDVVPYLLKGSFHNHIRLNQTSFSILVMAYIKHGMVDDCLALLREKKWRDSAFE 524
Query: 1254 DNLYHLLICSCKELGHLEDAVTIYA-SMRSSSKPNVHIMSTMIDIYTVMNRFEEAENIYL 1078
+LYHLLICSCKE G L DAV +Y +M S + N+HI STMIDIYTVM F EAE +YL
Sbjct: 525 SHLYHLLICSCKESGQLTDAVKLYNHTMESDEEINLHITSTMIDIYTVMGEFGEAEKLYL 584
Query: 1077 KLNSSGVTLDMIAFSIVVRMYVKSGSLKDACSVLDSMENRSDIHPDVYLLRDMLRIYQRL 898
L SSGV LD I FSIVVRMYVK+GSL++ACSVL+ M+ + DI PDVYL RDMLRIYQ+
Sbjct: 585 NLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKC 644
Query: 897 DRRDKLSDLYYKILKTGTPLDQEMYNCIINCCARALPVDELSRVFDEMLERGFEPNTFTF 718
D +DKL LYY+I K+G DQEMYNC+INCCARALP+DELSR F+EM+ GF PNT TF
Sbjct: 645 DLQDKLQHLYYRIQKSGIHWDQEMYNCVINCCARALPLDELSRTFEEMIRYGFTPNTVTF 704
Query: 717 NVMLDVYGKCRLFKKVRRIYLMAKRRGLVDVISYNTIIASYGKGKNLRKMSSAVKEMKFS 538
NV+LDVYGK +LFKKV ++L+AKR G+VDVISYNTIIA+YGK K+ MSSA+K M+F
Sbjct: 705 NVLLDVYGKAKLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDFTNMSSAIKNMQFD 764
Query: 537 GFSVSLEAYNSMLDAYGKEDKMEKFRDVLQRMKESSCTSDHYTYNTMINIYGEKGWIEEV 358
GFSVSLEAYN++LDAYGK+ +MEKFR +L+RMK+S+ DHYTYN MINIYGE+GWI+EV
Sbjct: 765 GFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEV 824
Query: 357 SGVLVQLKESGLGPDLCSYNTLIKAYGIAGMVDDAVSLVKEMREKGVEPDKVTYTNLVTA 178
+GVL +LKESGLGPDLCSYNTLIKAYGI GMV++AV LVKEMR K + PDKVTYTNLVTA
Sbjct: 825 AGVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGKNITPDKVTYTNLVTA 884
Query: 177 LRKNDMFLEAVKWSLWMKQMG 115
LRKND FLEA+KWSLWMKQMG
Sbjct: 885 LRKNDEFLEAIKWSLWMKQMG 905
Score = 93.6 bits (231), Expect = 2e-16
Identities = 75/336 (22%), Positives = 144/336 (42%), Gaps = 7/336 (2%)
Frame = -3
Query: 1098 EAENIYLKLNSSGVTLDMIAFSIVVRMY------VKSGSLKDACSVLDSMENRSDIHPDV 937
E EN+++ V I + + Y ++S S +A D M + + +
Sbjct: 117 ELENLFVNNGEMDVNYSAIKPGLSLEHYNAILKRLESCSDTNAIKFFDWMRCKGKLEGNF 176
Query: 936 YLLRDMLRIYQRLDRRDKLSDLYYKILK-TGTPLDQEMYNCIINCCARALPVDELSRVFD 760
+LR+ R + ++ DL ++ G +++N +I C + V S+ F
Sbjct: 177 GAYSLILRVLGRREEWNRAEDLIEELCGFQGFQQSFQVFNTVIYACTKKGNVKLASKWFQ 236
Query: 759 EMLERGFEPNTFTFNVMLDVYGKCRLFKKVRRIYLMAKRRGLVDVISYNTIIASYGKGKN 580
MLE G PN T +++ +Y K ++N A + +
Sbjct: 237 MMLELGVRPNVATIGMLMGLYQK-----------------------NWNVDEAEFAFS-H 272
Query: 579 LRKMSSAVKEMKFSGFSVSLEAYNSMLDAYGKEDKMEKFRDVLQRMKESSCTSDHYTYNT 400
+RK + AY+SM+ Y + EK +V+ MK+ +
Sbjct: 273 MRKFEIVCES-----------AYSSMITIYTRLRLYEKAEEVINLMKQDRVRLKLENWLV 321
Query: 399 MINIYGEKGWIEEVSGVLVQLKESGLGPDLCSYNTLIKAYGIAGMVDDAVSLVKEMREKG 220
M+N Y ++G +E+ VL+ ++ +G P++ +YNTLI YG ++ A SL + + G
Sbjct: 322 MLNAYSQQGKMEQAESVLISMEAAGFAPNIIAYNTLITGYGKVSKMEAAKSLFHRLSDIG 381
Query: 219 VEPDKVTYTNLVTALRKNDMFLEAVKWSLWMKQMGF 112
+EPD+ +Y +++ + D + EA + +K+ G+
Sbjct: 382 LEPDETSYRSMIEGWGRADNYEEANHYYQELKRCGY 417
>ref|XP_004146719.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
chloroplastic-like [Cucumis sativus]
Length = 894
Score = 1013 bits (2619), Expect = 0.0
Identities = 489/742 (65%), Positives = 601/742 (80%), Gaps = 1/742 (0%)
Frame = -3
Query: 2334 WMRSNEKLKQNVNAYKVALRVLGRRQD*DGAEVMIQEMVGESGCKLNFQVFNTLIYACNK 2155
WMRSN KLK NV+AY + LRVLGR++D D AE +I+E+ E G +L+FQVFNTLIYAC K
Sbjct: 153 WMRSNGKLKHNVSAYNLVLRVLGRQEDWDAAEKLIEEVRAELGSQLDFQVFNTLIYACYK 212
Query: 2154 QGFAELGGKWFRMMLGMGVRPNVATIGMLMSLYQKRLVVQEAEFTFSQMRRCKIMCESAY 1975
F E G KWFRMML V+PNVAT GMLM LYQK+ ++E+EF F+QMR I+CE+AY
Sbjct: 213 SRFVEQGTKWFRMMLECQVQPNVATFGMLMGLYQKKCDIKESEFAFNQMRNFGIVCETAY 272
Query: 1974 SAMITIYTRLRLYDKAEQVIGLLKEDDVVMNKENWLVLINAYCQQGKLEKAELALISMQE 1795
++MITIY R+ LYDKAE+VI L++ED V+ N ENW+V++NAYCQQGK+E+AEL SM+E
Sbjct: 273 ASMITIYIRMNLYDKAEEVIQLMQEDKVIPNLENWVVMLNAYCQQGKMEEAELVFASMEE 332
Query: 1794 AGFPPHIVAYNTLITGYGKVFNMDAARLLFENLEKVGLKPDETTYRSMIEGWGRVDNYKE 1615
AGF +I+AYNTLITGYGK NMD A+ LF ++ G++PDETTYRSMIEGWGR NYK
Sbjct: 333 AGFSSNIIAYNTLITGYGKASNMDTAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKM 392
Query: 1614 AEWYYKELEFLGFSPNASNLHTMLNLQAKHEDEEGAIKTLNKMITMDCEYTSVLGILIQA 1435
AEWYYKEL+ G+ PN+SNL T++NLQAKHEDE G +KTLN M+ + C +S++G ++QA
Sbjct: 393 AEWYYKELKRRGYMPNSSNLFTLINLQAKHEDEAGTLKTLNDMLKIGCRPSSIVGNVLQA 452
Query: 1434 YERAGKFDKVPSVLTGLFYEHVLVNQTSCSILVMAYVKHSLVTDAVKVLHEKRWKDPIFE 1255
YE+A + VP +LTG FY VL +QTSCSILVMAYVKH LV DA+KVL EK WKD FE
Sbjct: 453 YEKARRMKSVPVLLTGSFYRKVLSSQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFE 512
Query: 1254 DNLYHLLICSCKELGHLEDAVTIYASM-RSSSKPNVHIMSTMIDIYTVMNRFEEAENIYL 1078
+NLYHLLICSCKELGHLE+A+ IY + + +KPN+HI TMIDIY++M RF + E +YL
Sbjct: 513 ENLYHLLICSCKELGHLENAIKIYTQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYL 572
Query: 1077 KLNSSGVTLDMIAFSIVVRMYVKSGSLKDACSVLDSMENRSDIHPDVYLLRDMLRIYQRL 898
L SSG+ LD+IA+++VVRMYVK+GSL+DACSVLD M + DI PD+YLLRDMLRIYQR
Sbjct: 573 SLRSSGIPLDLIAYNVVVRMYVKAGSLEDACSVLDLMAEQQDIVPDIYLLRDMLRIYQRC 632
Query: 897 DRRDKLSDLYYKILKTGTPLDQEMYNCIINCCARALPVDELSRVFDEMLERGFEPNTFTF 718
KL+DLYY+ILK+G DQEMYNC+INCC+RALPVDELSR+FDEML+ GF PNT T
Sbjct: 633 GMVHKLADLYYRILKSGVSWDQEMYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTL 692
Query: 717 NVMLDVYGKCRLFKKVRRIYLMAKRRGLVDVISYNTIIASYGKGKNLRKMSSAVKEMKFS 538
NVMLDVYGK +LF K R ++ +A++RGLVD ISYNT+I+ YGK K+ + MSS V++MKF+
Sbjct: 693 NVMLDVYGKSKLFTKARNLFGLAQKRGLVDAISYNTMISVYGKNKDFKNMSSTVQKMKFN 752
Query: 537 GFSVSLEAYNSMLDAYGKEDKMEKFRDVLQRMKESSCTSDHYTYNTMINIYGEKGWIEEV 358
GFSVSLEAYN MLDAYGKE +ME FR VLQRM+E+S DHYTYN MINIYGE+GWI+EV
Sbjct: 753 GFSVSLEAYNCMLDAYGKECQMENFRSVLQRMQETSSECDHYTYNIMINIYGEQGWIDEV 812
Query: 357 SGVLVQLKESGLGPDLCSYNTLIKAYGIAGMVDDAVSLVKEMREKGVEPDKVTYTNLVTA 178
+ VL +LK GL PDL SYNTLIKAYGIAGMV++A LVKEMREK +EPD++TY N++ A
Sbjct: 813 AEVLTELKACGLEPDLYSYNTLIKAYGIAGMVEEAAQLVKEMREKRIEPDRITYINMIRA 872
Query: 177 LRKNDMFLEAVKWSLWMKQMGF 112
L++ND FLEAVKWSLWMKQM +
Sbjct: 873 LQRNDQFLEAVKWSLWMKQMKY 894
>ref|NP_567856.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635625|sp|O65567.2|PP342_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g30825, chloroplastic; Flags: Precursor
gi|332660415|gb|AEE85815.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 904
Score = 999 bits (2583), Expect = 0.0
Identities = 489/741 (65%), Positives = 595/741 (80%), Gaps = 1/741 (0%)
Frame = -3
Query: 2334 WMRSNEKLKQNVNAYKVALRVLGRRQD*DGAEVMIQEMVGESGCKLNFQVFNTLIYACNK 2155
WMR N KL N AY + LRVLGRR++ D AE +I+E+ G + ++QVFNT+IYAC K
Sbjct: 163 WMRCNGKLVGNFVAYSLILRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTVIYACTK 222
Query: 2154 QGFAELGGKWFRMMLGMGVRPNVATIGMLMSLYQKRLVVQEAEFTFSQMRRCKIMCESAY 1975
+G +L KWF MML GVRPNVATIGMLM LYQK V+EAEF FS MR+ I+CESAY
Sbjct: 223 KGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCESAY 282
Query: 1974 SAMITIYTRLRLYDKAEQVIGLLKEDDVVMNKENWLVLINAYCQQGKLEKAELALISMQE 1795
S+MITIYTRLRLYDKAE+VI L+K+D V + ENWLV++NAY QQGK+E AE L+SM+
Sbjct: 283 SSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEA 342
Query: 1794 AGFPPHIVAYNTLITGYGKVFNMDAARLLFENLEKVGLKPDETTYRSMIEGWGRVDNYKE 1615
AGF P+I+AYNTLITGYGK+F M+AA+ LF L +GL+PDET+YRSMIEGWGR DNY+E
Sbjct: 343 AGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEE 402
Query: 1614 AEWYYKELEFLGFSPNASNLHTMLNLQAKHEDEEGAIKTLNKMITMDCEYTSVLGILIQA 1435
A+ YY+EL+ G+ PN+ NL T++NLQAK+ D +GAIKT+ M + C+Y+S+LGI++QA
Sbjct: 403 AKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSILGIILQA 462
Query: 1434 YERAGKFDKVPSVLTGLFYEHVLVNQTSCSILVMAYVKHSLVTDAVKVLHEKRWKDPIFE 1255
YE+ GK D VP VL G F+ H+ +NQTS S LVMAYVKH +V D + +L EK+W+D FE
Sbjct: 463 YEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFE 522
Query: 1254 DNLYHLLICSCKELGHLEDAVTIYA-SMRSSSKPNVHIMSTMIDIYTVMNRFEEAENIYL 1078
+LYHLLICSCKE G L DAV IY M S + N+HI STMIDIYTVM F EAE +YL
Sbjct: 523 SHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYL 582
Query: 1077 KLNSSGVTLDMIAFSIVVRMYVKSGSLKDACSVLDSMENRSDIHPDVYLLRDMLRIYQRL 898
L SSGV LD I FSIVVRMYVK+GSL++ACSVL+ M+ + DI PDVYL RDMLRIYQ+
Sbjct: 583 NLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKC 642
Query: 897 DRRDKLSDLYYKILKTGTPLDQEMYNCIINCCARALPVDELSRVFDEMLERGFEPNTFTF 718
D +DKL LYY+I K+G +QEMYNC+INCCARALP+DELS F+EM+ GF PNT TF
Sbjct: 643 DLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTF 702
Query: 717 NVMLDVYGKCRLFKKVRRIYLMAKRRGLVDVISYNTIIASYGKGKNLRKMSSAVKEMKFS 538
NV+LDVYGK +LFKKV ++L+AKR G+VDVISYNTIIA+YGK K+ MSSA+K M+F
Sbjct: 703 NVLLDVYGKAKLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFD 762
Query: 537 GFSVSLEAYNSMLDAYGKEDKMEKFRDVLQRMKESSCTSDHYTYNTMINIYGEKGWIEEV 358
GFSVSLEAYN++LDAYGK+ +MEKFR +L+RMK+S+ DHYTYN MINIYGE+GWI+EV
Sbjct: 763 GFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEV 822
Query: 357 SGVLVQLKESGLGPDLCSYNTLIKAYGIAGMVDDAVSLVKEMREKGVEPDKVTYTNLVTA 178
+ VL +LKESGLGPDLCSYNTLIKAYGI GMV++AV LVKEMR + + PDKVTYTNLVTA
Sbjct: 823 ADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTA 882
Query: 177 LRKNDMFLEAVKWSLWMKQMG 115
LR+ND FLEA+KWSLWMKQMG
Sbjct: 883 LRRNDEFLEAIKWSLWMKQMG 903
Score = 84.7 bits (208), Expect = 1e-13
Identities = 63/271 (23%), Positives = 116/271 (42%), Gaps = 1/271 (0%)
Frame = -3
Query: 921 MLRIYQRLDRRDKLSDLYYKILKTGT-PLDQEMYNCIINCCARALPVDELSRVFDEMLER 745
+LR+ R + D+ DL ++ +++N +I C + V S+ F MLE
Sbjct: 180 ILRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTVIYACTKKGNVKLASKWFHMMLEF 239
Query: 744 GFEPNTFTFNVMLDVYGKCRLFKKVRRIYLMAKRRGLVDVISYNTIIASYGKGKNLRKMS 565
G PN T +++ +Y K N+ +
Sbjct: 240 GVRPNVATIGMLMGLYQK----------------------------------NWNVEEAE 265
Query: 564 SAVKEMKFSGFSVSLEAYNSMLDAYGKEDKMEKFRDVLQRMKESSCTSDHYTYNTMINIY 385
A M+ G V AY+SM+ Y + +K +V+ MK+ + M+N Y
Sbjct: 266 FAFSHMRKFGI-VCESAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAY 324
Query: 384 GEKGWIEEVSGVLVQLKESGLGPDLCSYNTLIKAYGIAGMVDDAVSLVKEMREKGVEPDK 205
++G +E +LV ++ +G P++ +YNTLI YG ++ A L + G+EPD+
Sbjct: 325 SQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDE 384
Query: 204 VTYTNLVTALRKNDMFLEAVKWSLWMKQMGF 112
+Y +++ + D + EA + +K+ G+
Sbjct: 385 TSYRSMIEGWGRADNYEEAKHYYQELKRCGY 415