BLASTX nr result

ID: Bupleurum21_contig00016206 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016206
         (667 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276849.2| PREDICTED: uncharacterized protein LOC100243...   171   1e-40
ref|NP_176947.1| sulfur E2 [Arabidopsis thaliana] gi|11072031|gb...   165   8e-39
ref|XP_002887146.1| Fe-S metabolism associated domain-containing...   160   2e-37
ref|XP_002530046.1| Cysteine desulfuration protein sufE, putativ...   154   2e-35
emb|CBI16800.3| unnamed protein product [Vitis vinifera]              153   3e-35

>ref|XP_002276849.2| PREDICTED: uncharacterized protein LOC100243361 [Vitis vinifera]
          Length = 742

 Score =  171 bits (433), Expect = 1e-40
 Identities = 91/139 (65%), Positives = 108/139 (77%), Gaps = 1/139 (0%)
 Frame = +2

Query: 254 CSPTISNPSHTSDDNVSRKIKCLISEFRSLTEPIERVKTLLHYATLLPFLDESIRCEENR 433
           CS    +PS TS+   S K+  LISEFR+L EP++RVK LLHYA++LP L+ES R   NR
Sbjct: 82  CSAVSFSPSRTSE-LASCKLGRLISEFRTLEEPVDRVKRLLHYASVLPPLEESARVAGNR 140

Query: 434 VPGCTAQVWLQVKMDFEGFMRFRVDSDSEITKGFASCLIWLLDGAAPEEVVADKAEDLAE 613
           V GCTAQVWL+VKMD EG MRF  DSDSEITKGF SCLIW+LDGAAPEEV+A K +DLA 
Sbjct: 141 VMGCTAQVWLEVKMDGEGRMRFAADSDSEITKGFCSCLIWVLDGAAPEEVLALKTDDLAA 200

Query: 614 MNVGILPA-NSRVNTWNTV 667
           +NVG+  A +SRVNTW+ V
Sbjct: 201 LNVGLPGAGHSRVNTWHNV 219


>ref|NP_176947.1| sulfur E2 [Arabidopsis thaliana]
           gi|11072031|gb|AAG28910.1|AC008113_26 F12A21.6
           [Arabidopsis thaliana] gi|117958779|gb|ABK59690.1|
           At1g67810 [Arabidopsis thaliana]
           gi|332196580|gb|AEE34701.1| sulfur E2 [Arabidopsis
           thaliana]
          Length = 258

 Score =  165 bits (417), Expect = 8e-39
 Identities = 94/179 (52%), Positives = 113/179 (63%), Gaps = 1/179 (0%)
 Frame = +2

Query: 134 PSSICCINTHNMLQLNPTTQISRKCKPFSLVVVVCCKQPICSPTISNPSHTSDDNVSRKI 313
           P  I C+     L  NP         PFSL  V          ++  P  T     S K+
Sbjct: 37  PKPITCMRDSLNLGSNPKAP-----SPFSLATV----------SVDAPLGTK---TSDKL 78

Query: 314 KCLISEFRSLTEPIERVKTLLHYATLLPFLDESIRCEENRVPGCTAQVWLQVKMDFEGFM 493
           + L+SEFRSLTEPI+RVK LL+YA  L  LDES R  ENRV GCT QVWL++KMD  G M
Sbjct: 79  RILVSEFRSLTEPIDRVKRLLNYAATLAPLDESARISENRVTGCTTQVWLEIKMDEFGRM 138

Query: 494 RFRVDSDSEITKGFASCLIWLLDGAAPEEVVADKAEDLAEMNVGIL-PANSRVNTWNTV 667
           RF+ DSDSEI+KGF SCLIW+LDGA PEEV+  ++EDL+EMNVG+     SRVNTW+ V
Sbjct: 139 RFKADSDSEISKGFCSCLIWILDGAKPEEVMGVRSEDLSEMNVGVHGKEQSRVNTWHNV 197


>ref|XP_002887146.1| Fe-S metabolism associated domain-containing protein [Arabidopsis
           lyrata subsp. lyrata] gi|297332987|gb|EFH63405.1| Fe-S
           metabolism associated domain-containing protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 258

 Score =  160 bits (406), Expect = 2e-37
 Identities = 79/121 (65%), Positives = 95/121 (78%), Gaps = 1/121 (0%)
 Frame = +2

Query: 308 KIKCLISEFRSLTEPIERVKTLLHYATLLPFLDESIRCEENRVPGCTAQVWLQVKMDFEG 487
           K++ L+SEFRSLTEPI+RVK LLHYA  L  LD+S R   NRV GCT QVWL++KMD  G
Sbjct: 76  KLRILVSEFRSLTEPIDRVKRLLHYAATLAPLDDSARVSANRVTGCTTQVWLEIKMDEFG 135

Query: 488 FMRFRVDSDSEITKGFASCLIWLLDGAAPEEVVADKAEDLAEMNVGIL-PANSRVNTWNT 664
            MRF+ DSDSEI+KGF SCLIW+LDGA PEEV+  ++EDL+EMNVG+     SRVNTW+ 
Sbjct: 136 RMRFKADSDSEISKGFCSCLIWILDGAKPEEVMGVRSEDLSEMNVGVHGKEQSRVNTWHN 195

Query: 665 V 667
           V
Sbjct: 196 V 196


>ref|XP_002530046.1| Cysteine desulfuration protein sufE, putative [Ricinus communis]
           gi|223530462|gb|EEF32346.1| Cysteine desulfuration
           protein sufE, putative [Ricinus communis]
          Length = 231

 Score =  154 bits (388), Expect = 2e-35
 Identities = 86/139 (61%), Positives = 100/139 (71%), Gaps = 1/139 (0%)
 Frame = +2

Query: 254 CSPTISNPSHTSDDNVSRKIKCLISEFRSLTEPIERVKTLLHYATLLPFLDESIRCEENR 433
           C PT++         VSR ++ L+SEF SLTEPI+RVK LL YA  LP  DES R   NR
Sbjct: 19  CYPTVA---------VSR-LERLVSEFESLTEPIDRVKRLLDYAARLPPFDESARSPGNR 68

Query: 434 VPGCTAQVWLQVKMDFEGFMRFRVDSDSEITKGFASCLIWLLDGAAPEEVVADKAEDLAE 613
           V GCT QVWL+V++D +G +RFR DSDSEITKGF SCLI LLDG  P+EVV+ KAEDLA 
Sbjct: 69  VTGCTTQVWLEVRIDEKGRVRFRGDSDSEITKGFISCLISLLDGLEPDEVVSVKAEDLAA 128

Query: 614 MNVGIL-PANSRVNTWNTV 667
           MNVGI   A SR+NTWN V
Sbjct: 129 MNVGIYGKAQSRINTWNNV 147


>emb|CBI16800.3| unnamed protein product [Vitis vinifera]
          Length = 284

 Score =  153 bits (386), Expect = 3e-35
 Identities = 79/123 (64%), Positives = 93/123 (75%), Gaps = 3/123 (2%)
 Frame = +2

Query: 308 KIKCLISEFRSLTEPIERVKTLLHYATLLPFLDESIRCEENRVPGCTAQVWLQVKMDFEG 487
           +++ L SEF  LTEPI+RVK LLHYA LLP  DES R   NRV GCTA+VWL V++D  G
Sbjct: 62  RLRSLASEFTGLTEPIDRVKRLLHYAELLPPFDESARVPANRVTGCTAEVWLDVRLDEFG 121

Query: 488 FMRFRVDSDSEITKGFASCLIWLLDGAAPEEVVADKAEDLAEMNVGI---LPANSRVNTW 658
             RF VDSDSEITKGF SCLI +LDGAAPEEV+  KAEDL EMNVG+   + A+SRVN W
Sbjct: 122 GTRFAVDSDSEITKGFCSCLIRVLDGAAPEEVLKMKAEDLMEMNVGVGLGVRAHSRVNAW 181

Query: 659 NTV 667
           + +
Sbjct: 182 HNI 184


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