BLASTX nr result

ID: Bupleurum21_contig00016201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016201
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325965.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-24
ref|XP_003598062.1| DNA mismatch repair protein Mlh1 [Medicago t...   116   2e-24
ref|NP_567345.2| DNA mismatch repair protein MLH1 [Arabidopsis t...   111   7e-23
gb|AAK25988.1|AF360278_1 putative MLH1 protein [Arabidopsis thal...   111   7e-23
ref|NP_001045457.1| Os01g0958900 [Oryza sativa Japonica Group] g...   111   7e-23

>ref|XP_002325965.1| predicted protein [Populus trichocarpa] gi|222862840|gb|EEF00347.1|
           predicted protein [Populus trichocarpa]
          Length = 747

 Score =  116 bits (291), Expect = 2e-24
 Identities = 55/75 (73%), Positives = 62/75 (82%)
 Frame = -1

Query: 365 DSTTLGDSDDMVKDDIEQGLLSEAENAWAQREWTIQHILFPSLRLFFSPPTSMATNGTFV 186
           D     D D  ++D++E  LLSEAE AWAQREW+IQH+LFPS+RLF  PPTSMATNGTFV
Sbjct: 673 DKEKATDIDVEMEDELEHELLSEAETAWAQREWSIQHVLFPSMRLFLKPPTSMATNGTFV 732

Query: 185 QVASLEKLYKIFERC 141
           QVASLEKLYKIFERC
Sbjct: 733 QVASLEKLYKIFERC 747


>ref|XP_003598062.1| DNA mismatch repair protein Mlh1 [Medicago truncatula]
           gi|355487110|gb|AES68313.1| DNA mismatch repair protein
           Mlh1 [Medicago truncatula]
          Length = 764

 Score =  116 bits (290), Expect = 2e-24
 Identities = 54/75 (72%), Positives = 63/75 (84%)
 Frame = -1

Query: 365 DSTTLGDSDDMVKDDIEQGLLSEAENAWAQREWTIQHILFPSLRLFFSPPTSMATNGTFV 186
           ++T      D++  +IEQ LLSEAE AWAQREW+IQH+LFPS+RLFF PP SMATNGTFV
Sbjct: 690 ENTCDNTGSDVIDSNIEQELLSEAETAWAQREWSIQHVLFPSMRLFFKPPPSMATNGTFV 749

Query: 185 QVASLEKLYKIFERC 141
           +VASLEKLYKIFERC
Sbjct: 750 KVASLEKLYKIFERC 764


>ref|NP_567345.2| DNA mismatch repair protein MLH1 [Arabidopsis thaliana]
           gi|3893081|emb|CAA10163.1| MLH1 protein [Arabidopsis
           thaliana] gi|7267557|emb|CAB78038.1| MLH1 protein
           [Arabidopsis thaliana] gi|332657326|gb|AEE82726.1| DNA
           mismatch repair protein MLH1 [Arabidopsis thaliana]
          Length = 737

 Score =  111 bits (277), Expect = 7e-23
 Identities = 49/64 (76%), Positives = 60/64 (93%)
 Frame = -1

Query: 332 VKDDIEQGLLSEAENAWAQREWTIQHILFPSLRLFFSPPTSMATNGTFVQVASLEKLYKI 153
           ++D+++Q LLS+AENAWAQREW+IQH+LFPS+RLF  PP SMA+NGTFV+VASLEKLYKI
Sbjct: 674 MEDNLDQDLLSDAENAWAQREWSIQHVLFPSMRLFLKPPASMASNGTFVKVASLEKLYKI 733

Query: 152 FERC 141
           FERC
Sbjct: 734 FERC 737


>gb|AAK25988.1|AF360278_1 putative MLH1 protein [Arabidopsis thaliana]
          Length = 727

 Score =  111 bits (277), Expect = 7e-23
 Identities = 49/64 (76%), Positives = 60/64 (93%)
 Frame = -1

Query: 332 VKDDIEQGLLSEAENAWAQREWTIQHILFPSLRLFFSPPTSMATNGTFVQVASLEKLYKI 153
           ++D+++Q LLS+AENAWAQREW+IQH+LFPS+RLF  PP SMA+NGTFV+VASLEKLYKI
Sbjct: 664 MEDNLDQDLLSDAENAWAQREWSIQHVLFPSMRLFLKPPASMASNGTFVKVASLEKLYKI 723

Query: 152 FERC 141
           FERC
Sbjct: 724 FERC 727


>ref|NP_001045457.1| Os01g0958900 [Oryza sativa Japonica Group]
           gi|57900283|dbj|BAD87116.1| putative MutL homolog 1
           protein [Oryza sativa Japonica Group]
           gi|113534988|dbj|BAF07371.1| Os01g0958900 [Oryza sativa
           Japonica Group] gi|215737085|dbj|BAG96014.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 724

 Score =  111 bits (277), Expect = 7e-23
 Identities = 52/69 (75%), Positives = 61/69 (88%), Gaps = 2/69 (2%)
 Frame = -1

Query: 341 DDMVKD--DIEQGLLSEAENAWAQREWTIQHILFPSLRLFFSPPTSMATNGTFVQVASLE 168
           +D++ D  D++Q LL+EAE AWAQREWTIQH+LFPS+RLF  PP SMAT+GTFVQVASLE
Sbjct: 656 NDLISDENDVDQELLAEAEAAWAQREWTIQHVLFPSMRLFLKPPKSMATDGTFVQVASLE 715

Query: 167 KLYKIFERC 141
           KLYKIFERC
Sbjct: 716 KLYKIFERC 724


Top