BLASTX nr result

ID: Bupleurum21_contig00016198 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016198
         (488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002890883.1| hypothetical protein ARALYDRAFT_890616 [Arab...   157   9e-37
ref|NP_174350.2| UDP-arabinose 4-epimerase [Arabidopsis thaliana...   155   3e-36
gb|AAN60309.1| unknown [Arabidopsis thaliana]                         155   3e-36
ref|XP_003546295.1| PREDICTED: UDP-arabinose 4-epimerase 1-like ...   149   2e-34
ref|NP_001077632.1| UDP-arabinose 4-epimerase [Arabidopsis thali...   149   2e-34

>ref|XP_002890883.1| hypothetical protein ARALYDRAFT_890616 [Arabidopsis lyrata subsp.
           lyrata] gi|297336725|gb|EFH67142.1| hypothetical protein
           ARALYDRAFT_890616 [Arabidopsis lyrata subsp. lyrata]
          Length = 418

 Score =  157 bits (397), Expect = 9e-37
 Identities = 75/98 (76%), Positives = 85/98 (86%)
 Frame = -3

Query: 294 MLNLNRSRTQSRATRSMSLGGMDLVEPKKKNNFVGKIILTAVLTALCIFMLKQSPSFNTP 115
           M N  R+R+Q R  RSMSLGG+D  +PKKKNN++GKI+LTA LTALCIFMLKQSP+FNTP
Sbjct: 1   MFNFGRARSQGRQNRSMSLGGLDYADPKKKNNYLGKILLTASLTALCIFMLKQSPTFNTP 60

Query: 114 SVFSHQEEGITHVLVTGGAGYIGSHAVLRLLKDSYRVT 1
           SVFS  E G+THVLVTGGAGYIGSHA LRLLK+SYRVT
Sbjct: 61  SVFSRHEPGVTHVLVTGGAGYIGSHAALRLLKESYRVT 98


>ref|NP_174350.2| UDP-arabinose 4-epimerase [Arabidopsis thaliana]
           gi|79318985|ref|NP_001031118.1| UDP-arabinose
           4-epimerase [Arabidopsis thaliana]
           gi|75313130|sp|Q9SA77.1|ARAE1_ARATH RecName:
           Full=UDP-arabinose 4-epimerase 1; AltName:
           Full=UDP-D-xylose 4-epimerase 1
           gi|4587518|gb|AAD25749.1|AC007060_7 Strong similarity to
           F19I3.8 gi|3033381 putative UDP-galactose-4-epimerase
           from Arabidopsis thaliana BAC gb|AC004238 and is a
           member of PF|01370 the NAD dependent
           epimerase/dehydratase family. EST gb|AA597338 comes from
           this gene [Arabidopsis thaliana]
           gi|13272475|gb|AAK17176.1|AF325108_1 unknown protein
           [Arabidopsis thaliana] gi|18086329|gb|AAL57628.1|
           At1g30620/T5I8_7 [Arabidopsis thaliana]
           gi|27363222|gb|AAO11530.1| At1g30620/T5I8_7 [Arabidopsis
           thaliana] gi|28395529|gb|AAO39213.1| UDP-D-xylose
           4-epimerase [Arabidopsis thaliana]
           gi|222423784|dbj|BAH19858.1| AT1G30620 [Arabidopsis
           thaliana] gi|332193130|gb|AEE31251.1| UDP-arabinose
           4-epimerase [Arabidopsis thaliana]
           gi|332193131|gb|AEE31252.1| UDP-arabinose 4-epimerase
           [Arabidopsis thaliana]
          Length = 419

 Score =  155 bits (392), Expect = 3e-36
 Identities = 74/98 (75%), Positives = 85/98 (86%)
 Frame = -3

Query: 294 MLNLNRSRTQSRATRSMSLGGMDLVEPKKKNNFVGKIILTAVLTALCIFMLKQSPSFNTP 115
           M +  R+R+Q R  RSMSLGG+D  +PKKKNN++GKI+LTA LTALCIFMLKQSP+FNTP
Sbjct: 1   MFSFGRARSQGRQNRSMSLGGLDYADPKKKNNYLGKILLTASLTALCIFMLKQSPTFNTP 60

Query: 114 SVFSHQEEGITHVLVTGGAGYIGSHAVLRLLKDSYRVT 1
           SVFS  E G+THVLVTGGAGYIGSHA LRLLK+SYRVT
Sbjct: 61  SVFSRHEPGVTHVLVTGGAGYIGSHAALRLLKESYRVT 98


>gb|AAN60309.1| unknown [Arabidopsis thaliana]
          Length = 419

 Score =  155 bits (392), Expect = 3e-36
 Identities = 74/98 (75%), Positives = 85/98 (86%)
 Frame = -3

Query: 294 MLNLNRSRTQSRATRSMSLGGMDLVEPKKKNNFVGKIILTAVLTALCIFMLKQSPSFNTP 115
           M +  R+R+Q R  RSMSLGG+D  +PKKKNN++GKI+LTA LTALCIFMLKQSP+FNTP
Sbjct: 1   MFSFGRARSQGRQNRSMSLGGLDYADPKKKNNYLGKILLTASLTALCIFMLKQSPTFNTP 60

Query: 114 SVFSHQEEGITHVLVTGGAGYIGSHAVLRLLKDSYRVT 1
           SVFS  E G+THVLVTGGAGYIGSHA LRLLK+SYRVT
Sbjct: 61  SVFSRHEPGVTHVLVTGGAGYIGSHAALRLLKESYRVT 98


>ref|XP_003546295.1| PREDICTED: UDP-arabinose 4-epimerase 1-like [Glycine max]
          Length = 415

 Score =  149 bits (376), Expect = 2e-34
 Identities = 71/98 (72%), Positives = 84/98 (85%)
 Frame = -3

Query: 294 MLNLNRSRTQSRATRSMSLGGMDLVEPKKKNNFVGKIILTAVLTALCIFMLKQSPSFNTP 115
           MLN NR+R+Q R+TRSMSLGGMD V+PK+K NFVGK+ L A LTALCI M+K+SPS N P
Sbjct: 1   MLNFNRTRSQPRSTRSMSLGGMDYVDPKRKGNFVGKVFLAAALTALCIIMIKRSPSLNPP 60

Query: 114 SVFSHQEEGITHVLVTGGAGYIGSHAVLRLLKDSYRVT 1
           S FS +E G+THVLVTGGAGYIGSHA LRLL+++YRVT
Sbjct: 61  SPFSIREPGVTHVLVTGGAGYIGSHATLRLLRENYRVT 98


>ref|NP_001077632.1| UDP-arabinose 4-epimerase [Arabidopsis thaliana]
           gi|332193132|gb|AEE31253.1| UDP-arabinose 4-epimerase
           [Arabidopsis thaliana]
          Length = 418

 Score =  149 bits (376), Expect = 2e-34
 Identities = 73/98 (74%), Positives = 84/98 (85%)
 Frame = -3

Query: 294 MLNLNRSRTQSRATRSMSLGGMDLVEPKKKNNFVGKIILTAVLTALCIFMLKQSPSFNTP 115
           M +  R+R+Q R  RSMSLGG+D  +PKKKNN++GKI+LTA LTALCIFMLKQSP+FNTP
Sbjct: 1   MFSFGRARSQGRQNRSMSLGGLDYADPKKKNNYLGKILLTASLTALCIFMLKQSPTFNTP 60

Query: 114 SVFSHQEEGITHVLVTGGAGYIGSHAVLRLLKDSYRVT 1
           S FS  E G+THVLVTGGAGYIGSHA LRLLK+SYRVT
Sbjct: 61  S-FSRHEPGVTHVLVTGGAGYIGSHAALRLLKESYRVT 97


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