BLASTX nr result

ID: Bupleurum21_contig00016192 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016192
         (660 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538198.1| PREDICTED: SNF1-related protein kinase regul...   185   8e-45
gb|ACU22829.1| unknown [Glycine max]                                  180   2e-43
ref|XP_002328163.1| predicted protein [Populus trichocarpa] gi|2...   177   2e-42
ref|XP_002277230.1| PREDICTED: SNF1-related protein kinase regul...   176   5e-42
ref|XP_002313527.1| predicted protein [Populus trichocarpa] gi|2...   175   6e-42

>ref|XP_003538198.1| PREDICTED: SNF1-related protein kinase regulatory subunit
           beta-3-like [Glycine max]
          Length = 117

 Score =  185 bits (469), Expect = 8e-45
 Identities = 87/117 (74%), Positives = 99/117 (84%)
 Frame = +3

Query: 294 MNNHYSGNQEEPTVAGFEVPRSPDASYNNVYPGNSDEGPEPPMVPQHLQHTLLNHPTGRG 473
           M+N +S N +E TVAGFEVP+SPD+SYNNVYPGN DE  +PPMVP HLQHTLLN+P  R 
Sbjct: 1   MSNSHSENHDEVTVAGFEVPKSPDSSYNNVYPGNEDEARDPPMVPSHLQHTLLNYPANR- 59

Query: 474 DAPNSVPLPQNVVLNHLYLENREPPRSVVALGLTHRFRTKYVTVVLYKPVQRNGSTS 644
           D   +VPLPQNV+LNHLY+ENRE PRSVVALG THRF +KYVTVVLYKPVQR G+TS
Sbjct: 60  DTAGTVPLPQNVILNHLYIENRESPRSVVALGFTHRFHSKYVTVVLYKPVQRRGNTS 116


>gb|ACU22829.1| unknown [Glycine max]
          Length = 117

 Score =  180 bits (457), Expect = 2e-43
 Identities = 84/117 (71%), Positives = 97/117 (82%)
 Frame = +3

Query: 294 MNNHYSGNQEEPTVAGFEVPRSPDASYNNVYPGNSDEGPEPPMVPQHLQHTLLNHPTGRG 473
           M+N +S N +E TV GFEVP+SPD+SYNNVYPGN DE  +PPMVP HLQHTLLN+P  R 
Sbjct: 1   MSNSHSENHDEATVVGFEVPKSPDSSYNNVYPGNEDEARDPPMVPSHLQHTLLNYPANR- 59

Query: 474 DAPNSVPLPQNVVLNHLYLENREPPRSVVALGLTHRFRTKYVTVVLYKPVQRNGSTS 644
           D   +VPLP+NV+LNHLY+ENRE PR VV LG THRFR+KYVTVVLYKPVQR G+TS
Sbjct: 60  DTAGTVPLPKNVILNHLYIENRESPRFVVGLGFTHRFRSKYVTVVLYKPVQRRGNTS 116


>ref|XP_002328163.1| predicted protein [Populus trichocarpa] gi|222837678|gb|EEE76043.1|
           predicted protein [Populus trichocarpa]
          Length = 117

 Score =  177 bits (449), Expect = 2e-42
 Identities = 84/118 (71%), Positives = 97/118 (82%)
 Frame = +3

Query: 294 MNNHYSGNQEEPTVAGFEVPRSPDASYNNVYPGNSDEGPEPPMVPQHLQHTLLNHPTGRG 473
           M+N YS +  E TV GFEVPRSPD+SYNNVYPGN DE  +PP VPQHLQH+LL++P    
Sbjct: 1   MSNQYSEDHGEATVVGFEVPRSPDSSYNNVYPGNEDEVRDPPSVPQHLQHSLLSYPVS-A 59

Query: 474 DAPNSVPLPQNVVLNHLYLENREPPRSVVALGLTHRFRTKYVTVVLYKPVQRNGSTST 647
           D   ++PLPQNV+LNHLY+ENRE PRSVVALG THRF +K+VTVVLYKPVQR GSTST
Sbjct: 60  DTSETLPLPQNVILNHLYIENREAPRSVVALGFTHRFHSKFVTVVLYKPVQRRGSTST 117


>ref|XP_002277230.1| PREDICTED: SNF1-related protein kinase regulatory subunit beta-3
           isoform 2 [Vitis vinifera]
           gi|225436534|ref|XP_002277210.1| PREDICTED: SNF1-related
           protein kinase regulatory subunit beta-3 isoform 1
           [Vitis vinifera] gi|297734940|emb|CBI17174.3| unnamed
           protein product [Vitis vinifera]
          Length = 117

 Score =  176 bits (445), Expect = 5e-42
 Identities = 81/118 (68%), Positives = 99/118 (83%)
 Frame = +3

Query: 294 MNNHYSGNQEEPTVAGFEVPRSPDASYNNVYPGNSDEGPEPPMVPQHLQHTLLNHPTGRG 473
           MNN Y  +Q++ TV GFEVP+SPD+SYNNVYPG+ DE  +PP VP HL H LL+HP+ R 
Sbjct: 1   MNNPYGEDQDDTTVVGFEVPKSPDSSYNNVYPGHEDEAKDPPPVPPHLLHPLLSHPSSR- 59

Query: 474 DAPNSVPLPQNVVLNHLYLENREPPRSVVALGLTHRFRTKYVTVVLYKPVQRNGSTST 647
           D   ++P+PQNV+LNHLY+ENRE PRSVVALG+THRFR+K+VTVVLYKPVQR+ STST
Sbjct: 60  DTSGTLPVPQNVILNHLYIENRETPRSVVALGITHRFRSKFVTVVLYKPVQRSASTST 117


>ref|XP_002313527.1| predicted protein [Populus trichocarpa] gi|222849935|gb|EEE87482.1|
           predicted protein [Populus trichocarpa]
          Length = 117

 Score =  175 bits (444), Expect = 6e-42
 Identities = 82/118 (69%), Positives = 98/118 (83%)
 Frame = +3

Query: 294 MNNHYSGNQEEPTVAGFEVPRSPDASYNNVYPGNSDEGPEPPMVPQHLQHTLLNHPTGRG 473
           M+N +S + E+ TVAGFEVPRSPD+SYNN YPGN DE  +PP VP HLQH+LL++P    
Sbjct: 1   MSNQFSEDNEDATVAGFEVPRSPDSSYNNAYPGNEDEVRDPPSVPPHLQHSLLSYPAS-A 59

Query: 474 DAPNSVPLPQNVVLNHLYLENREPPRSVVALGLTHRFRTKYVTVVLYKPVQRNGSTST 647
           D+  ++PLPQNV+LNHLY+ENRE PRSVVALG THRF +K+VTVVLYKPVQR GSTST
Sbjct: 60  DSSETLPLPQNVILNHLYIENRETPRSVVALGFTHRFHSKFVTVVLYKPVQRRGSTST 117


Top