BLASTX nr result

ID: Bupleurum21_contig00016180 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016180
         (1111 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282814.2| PREDICTED: hydroxymethylglutaryl-CoA lyase, ...   420   e-115
emb|CBI32791.3| unnamed protein product [Vitis vinifera]              420   e-115
ref|XP_003545429.1| PREDICTED: hydroxymethylglutaryl-CoA lyase, ...   414   e-113
ref|XP_002517305.1| hydroxymethylglutaryl-CoA lyase, putative [R...   414   e-113
ref|XP_003555172.1| PREDICTED: hydroxymethylglutaryl-CoA lyase, ...   410   e-112

>ref|XP_002282814.2| PREDICTED: hydroxymethylglutaryl-CoA lyase, mitochondrial [Vitis
            vinifera]
          Length = 427

 Score =  420 bits (1079), Expect = e-115
 Identities = 221/310 (71%), Positives = 243/310 (78%)
 Frame = -2

Query: 1107 HKFFGTMPEFVKIWEVGPRDGLQNEKGIVPTDVKVELIKMLVSSGLDIVEATSFVSPKWV 928
            +K   +MP FVKI EVGPRDGLQNEK IVPT VKVELIKMLVSSGL IVEATSFVSPKWV
Sbjct: 118  NKLLRSMPGFVKIVEVGPRDGLQNEKDIVPTVVKVELIKMLVSSGLPIVEATSFVSPKWV 177

Query: 927  PQLADAKDVIQAIQNVEGARFPVLTPNLXXXXXXXXXXXXXXXXXXXXXXXXSRSNINCS 748
            PQLADAKDV++AI+ VEG RFPVLTPNL                        S+SNINCS
Sbjct: 178  PQLADAKDVMEAIRTVEGGRFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCS 237

Query: 747  IEDSLIRFREVAFAAQKLSIPVRGYVSCVVGCPEEGAVPPSKVAYVAKELLSMGCIEISL 568
            IEDSL R+R+VA AA+KLSIPVRGY+SCVVGCP EG V PSKV YV KEL  MGC EISL
Sbjct: 238  IEDSLTRYRDVALAARKLSIPVRGYISCVVGCPLEGVVSPSKVTYVGKELYDMGCYEISL 297

Query: 567  GDTIGVGTPGTXXXXXXXXXXXXXXERLAVHFHDTYGQALSNILVSLQMGISTVDSSVAG 388
            GDTIGVGTPGT              ++LAVHFHDTYGQALSNIL SLQMGI+TVDSSV+G
Sbjct: 298  GDTIGVGTPGTVIPMLEDVIDVVPIDKLAVHFHDTYGQALSNILASLQMGITTVDSSVSG 357

Query: 387  LGGCPYAKSATGNVATEDVVYMLDGLGVKTNVDLRKLILAGNYISKHLGRTSSSKTAIAL 208
            LGGCPYAK A+GNVATEDVVYML+GLGVKTNVDL KL+LAG++I +HLGR S SKTAIAL
Sbjct: 358  LGGCPYAKGASGNVATEDVVYMLNGLGVKTNVDLGKLMLAGDFICQHLGRQSGSKTAIAL 417

Query: 207  SKTMGNVSKL 178
            S+  G+ SKL
Sbjct: 418  SRIRGHASKL 427


>emb|CBI32791.3| unnamed protein product [Vitis vinifera]
          Length = 398

 Score =  420 bits (1079), Expect = e-115
 Identities = 221/310 (71%), Positives = 243/310 (78%)
 Frame = -2

Query: 1107 HKFFGTMPEFVKIWEVGPRDGLQNEKGIVPTDVKVELIKMLVSSGLDIVEATSFVSPKWV 928
            +K   +MP FVKI EVGPRDGLQNEK IVPT VKVELIKMLVSSGL IVEATSFVSPKWV
Sbjct: 89   NKLLRSMPGFVKIVEVGPRDGLQNEKDIVPTVVKVELIKMLVSSGLPIVEATSFVSPKWV 148

Query: 927  PQLADAKDVIQAIQNVEGARFPVLTPNLXXXXXXXXXXXXXXXXXXXXXXXXSRSNINCS 748
            PQLADAKDV++AI+ VEG RFPVLTPNL                        S+SNINCS
Sbjct: 149  PQLADAKDVMEAIRTVEGGRFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCS 208

Query: 747  IEDSLIRFREVAFAAQKLSIPVRGYVSCVVGCPEEGAVPPSKVAYVAKELLSMGCIEISL 568
            IEDSL R+R+VA AA+KLSIPVRGY+SCVVGCP EG V PSKV YV KEL  MGC EISL
Sbjct: 209  IEDSLTRYRDVALAARKLSIPVRGYISCVVGCPLEGVVSPSKVTYVGKELYDMGCYEISL 268

Query: 567  GDTIGVGTPGTXXXXXXXXXXXXXXERLAVHFHDTYGQALSNILVSLQMGISTVDSSVAG 388
            GDTIGVGTPGT              ++LAVHFHDTYGQALSNIL SLQMGI+TVDSSV+G
Sbjct: 269  GDTIGVGTPGTVIPMLEDVIDVVPIDKLAVHFHDTYGQALSNILASLQMGITTVDSSVSG 328

Query: 387  LGGCPYAKSATGNVATEDVVYMLDGLGVKTNVDLRKLILAGNYISKHLGRTSSSKTAIAL 208
            LGGCPYAK A+GNVATEDVVYML+GLGVKTNVDL KL+LAG++I +HLGR S SKTAIAL
Sbjct: 329  LGGCPYAKGASGNVATEDVVYMLNGLGVKTNVDLGKLMLAGDFICQHLGRQSGSKTAIAL 388

Query: 207  SKTMGNVSKL 178
            S+  G+ SKL
Sbjct: 389  SRIRGHASKL 398


>ref|XP_003545429.1| PREDICTED: hydroxymethylglutaryl-CoA lyase, mitochondrial-like
            [Glycine max]
          Length = 433

 Score =  414 bits (1065), Expect = e-113
 Identities = 212/310 (68%), Positives = 241/310 (77%)
 Frame = -2

Query: 1107 HKFFGTMPEFVKIWEVGPRDGLQNEKGIVPTDVKVELIKMLVSSGLDIVEATSFVSPKWV 928
            +KF  ++P+FVKI EVGPRDGLQNEK IVPT VK+ELI  L S+GL ++EATSFVSPKWV
Sbjct: 122  YKFLNSIPKFVKIVEVGPRDGLQNEKNIVPTSVKIELIHRLASTGLSVIEATSFVSPKWV 181

Query: 927  PQLADAKDVIQAIQNVEGARFPVLTPNLXXXXXXXXXXXXXXXXXXXXXXXXSRSNINCS 748
            PQLADAKDV+QA+ N+ G R PVLTPNL                        S+SNINCS
Sbjct: 182  PQLADAKDVMQAVHNLRGIRLPVLTPNLKGFEAAMASGAREVAIFASASESFSKSNINCS 241

Query: 747  IEDSLIRFREVAFAAQKLSIPVRGYVSCVVGCPEEGAVPPSKVAYVAKELLSMGCIEISL 568
            IE+SLIRFR V  AA++LSIPVRGYVSCV GCP EG +PPSKVAYVAKEL  MGC EISL
Sbjct: 242  IEESLIRFRAVTRAAKQLSIPVRGYVSCVAGCPVEGPIPPSKVAYVAKELYDMGCFEISL 301

Query: 567  GDTIGVGTPGTXXXXXXXXXXXXXXERLAVHFHDTYGQALSNILVSLQMGISTVDSSVAG 388
            GDTIGVGTPGT              +++AVHFHDTYGQ+L NILVSLQMGISTVDSSVAG
Sbjct: 302  GDTIGVGTPGTVVPMLLAVMAVVPIDKIAVHFHDTYGQSLPNILVSLQMGISTVDSSVAG 361

Query: 387  LGGCPYAKSATGNVATEDVVYMLDGLGVKTNVDLRKLILAGNYISKHLGRTSSSKTAIAL 208
            LGGCPYAK A+GNVATEDVVYML+GLGVKTNVDL KL+LAG++IS HLGR S+SKTAIAL
Sbjct: 362  LGGCPYAKGASGNVATEDVVYMLNGLGVKTNVDLGKLMLAGDFISNHLGRPSTSKTAIAL 421

Query: 207  SKTMGNVSKL 178
            ++   N SK+
Sbjct: 422  NRVTSNASKI 431


>ref|XP_002517305.1| hydroxymethylglutaryl-CoA lyase, putative [Ricinus communis]
            gi|223543568|gb|EEF45098.1| hydroxymethylglutaryl-CoA
            lyase, putative [Ricinus communis]
          Length = 377

 Score =  414 bits (1065), Expect = e-113
 Identities = 215/309 (69%), Positives = 242/309 (78%)
 Frame = -2

Query: 1104 KFFGTMPEFVKIWEVGPRDGLQNEKGIVPTDVKVELIKMLVSSGLDIVEATSFVSPKWVP 925
            K    +PE+VKI EVGPRDGLQNEK +VPT +KVELIKMLVSSGL +VEATSFVSPKWVP
Sbjct: 69   KLLRYVPEYVKIVEVGPRDGLQNEKDVVPTAIKVELIKMLVSSGLPVVEATSFVSPKWVP 128

Query: 924  QLADAKDVIQAIQNVEGARFPVLTPNLXXXXXXXXXXXXXXXXXXXXXXXXSRSNINCSI 745
            QLADAKDV+ AI++VEGARFPVLTPNL                        S+SNINCSI
Sbjct: 129  QLADAKDVMAAIRDVEGARFPVLTPNLKGFEAAVAAGAKEVAVFASASESFSKSNINCSI 188

Query: 744  EDSLIRFREVAFAAQKLSIPVRGYVSCVVGCPEEGAVPPSKVAYVAKELLSMGCIEISLG 565
            EDSL+R+ +VA AA KLSIP+RGY+SCVVGCP EG + PSKVAYVAK L  MGC EISLG
Sbjct: 189  EDSLVRYSDVALAASKLSIPMRGYISCVVGCPIEGMISPSKVAYVAKRLCDMGCSEISLG 248

Query: 564  DTIGVGTPGTXXXXXXXXXXXXXXERLAVHFHDTYGQALSNILVSLQMGISTVDSSVAGL 385
            DTIGVGTPGT              ++LAVHFHDTYGQALSNIL SLQ+GI TVDSSV+GL
Sbjct: 249  DTIGVGTPGTVITMLEAVMEVVAIDKLAVHFHDTYGQALSNILASLQIGIKTVDSSVSGL 308

Query: 384  GGCPYAKSATGNVATEDVVYMLDGLGVKTNVDLRKLILAGNYISKHLGRTSSSKTAIALS 205
            GGCPYA  A+GNVATEDVVYML+GLGVKTNVDL+K++LAGN+I KHLGRT+ SKTAIALS
Sbjct: 309  GGCPYAIGASGNVATEDVVYMLNGLGVKTNVDLQKVMLAGNFICKHLGRTTGSKTAIALS 368

Query: 204  KTMGNVSKL 178
            K   + SKL
Sbjct: 369  KITAHASKL 377


>ref|XP_003555172.1| PREDICTED: hydroxymethylglutaryl-CoA lyase, mitochondrial-like
            [Glycine max]
          Length = 435

 Score =  410 bits (1055), Expect = e-112
 Identities = 212/310 (68%), Positives = 237/310 (76%)
 Frame = -2

Query: 1107 HKFFGTMPEFVKIWEVGPRDGLQNEKGIVPTDVKVELIKMLVSSGLDIVEATSFVSPKWV 928
            +KF   +P FVKI EVGPRDGLQNEK IVPTDVK+ELI  L SSGL ++EATSFVSPKWV
Sbjct: 126  YKFMKGIPNFVKIVEVGPRDGLQNEKNIVPTDVKIELIHRLASSGLSVIEATSFVSPKWV 185

Query: 927  PQLADAKDVIQAIQNVEGARFPVLTPNLXXXXXXXXXXXXXXXXXXXXXXXXSRSNINCS 748
            PQLADAKDV+QA+ N+ G R PVLTPNL                        S+SNINCS
Sbjct: 186  PQLADAKDVMQAVHNLGGIRLPVLTPNLKGFEAAIAAGAREVAVFASASESFSKSNINCS 245

Query: 747  IEDSLIRFREVAFAAQKLSIPVRGYVSCVVGCPEEGAVPPSKVAYVAKELLSMGCIEISL 568
            IE+SL+R+R V  AA++LSIPVRGYVSCVVGCP EG +PPSKVAYVAKEL  MGC EISL
Sbjct: 246  IEESLVRYRAVTRAAKQLSIPVRGYVSCVVGCPVEGPIPPSKVAYVAKELYDMGCFEISL 305

Query: 567  GDTIGVGTPGTXXXXXXXXXXXXXXERLAVHFHDTYGQALSNILVSLQMGISTVDSSVAG 388
            GDTIGVGTPGT              E+LAVHFHDTYGQ+L NILVSLQMGIS VDSSVAG
Sbjct: 306  GDTIGVGTPGTVVPMLLAVMAVVPAEKLAVHFHDTYGQSLPNILVSLQMGISAVDSSVAG 365

Query: 387  LGGCPYAKSATGNVATEDVVYMLDGLGVKTNVDLRKLILAGNYISKHLGRTSSSKTAIAL 208
            LGGCPYAK A+GNVATEDVVYML+GLGVKTNVDL KL+LAG +I KHLGR S SKTA+A 
Sbjct: 366  LGGCPYAKGASGNVATEDVVYMLNGLGVKTNVDLGKLMLAGEFIGKHLGRPSGSKTAVAF 425

Query: 207  SKTMGNVSKL 178
            S+   + SK+
Sbjct: 426  SRVTADASKI 435


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