BLASTX nr result

ID: Bupleurum21_contig00016175 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016175
         (988 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273237.1| PREDICTED: uncharacterized protein LOC100251...   314   2e-83
ref|XP_002309368.1| predicted protein [Populus trichocarpa] gi|2...   312   9e-83
ref|XP_003518229.1| PREDICTED: uncharacterized protein LOC100795...   311   2e-82
ref|XP_002867327.1| WD-40 repeat protein family [Arabidopsis lyr...   304   2e-80
ref|NP_567858.1| transducin/WD40 domain-containing protein [Arab...   303   5e-80

>ref|XP_002273237.1| PREDICTED: uncharacterized protein LOC100251872 [Vitis vinifera]
           gi|297743697|emb|CBI36580.3| unnamed protein product
           [Vitis vinifera]
          Length = 357

 Score =  314 bits (804), Expect = 2e-83
 Identities = 149/202 (73%), Positives = 169/202 (83%), Gaps = 2/202 (0%)
 Frame = +3

Query: 6   GEGE-LSYKKVFDSNGLVSYTAAKWASPSEFATGGLGFSLQWWDQRKPGAAVSQFKCNWD 182
           G+G  LSY++V+DS+GLVSYTAAKWASP+EFATGG GF LQWWD RKPG  VSQFK NW 
Sbjct: 155 GDGSRLSYRRVWDSDGLVSYTAAKWASPTEFATGGFGFGLQWWDLRKPGGPVSQFKGNWA 214

Query: 183 QGSSSGIVHSIDIHPSRKHTCLAGGSSGTVFTWDIRWPQQPVVLSGAGQDNAPARSLSAS 362
           Q ++SGIVHSIDIHPSRKHTCLAGGS GTVF WD+RW QQP++LSG G       S   S
Sbjct: 215 QRTTSGIVHSIDIHPSRKHTCLAGGSLGTVFAWDLRWQQQPIILSGVGTSEVATHSPCES 274

Query: 363 EVWEVQFDPFTNSSNH-RVSSTRVLPVMICSEDGILAVAEQGEEPTELLLEPCAINSFDI 539
           EVWEV++DP+  +SN   +SS+R+LP M+CSEDGILAV EQGEEP ELL EPCAINSFDI
Sbjct: 275 EVWEVKYDPYMRTSNFGNMSSSRILPAMLCSEDGILAVVEQGEEPIELLAEPCAINSFDI 334

Query: 540 DRQNPSDVICSMEWESIAILSR 605
           DRQNPSDVICS+EWESIAILSR
Sbjct: 335 DRQNPSDVICSLEWESIAILSR 356


>ref|XP_002309368.1| predicted protein [Populus trichocarpa] gi|222855344|gb|EEE92891.1|
           predicted protein [Populus trichocarpa]
          Length = 360

 Score =  312 bits (799), Expect = 9e-83
 Identities = 143/194 (73%), Positives = 166/194 (85%)
 Frame = +3

Query: 24  YKKVFDSNGLVSYTAAKWASPSEFATGGLGFSLQWWDQRKPGAAVSQFKCNWDQGSSSGI 203
           +++VFD NGLVSY+A KWASPSEF TGG GF LQWWD R+PGAAV+QFK +WD+G++SGI
Sbjct: 166 FRRVFDGNGLVSYSAVKWASPSEFVTGGCGFGLQWWDLRQPGAAVAQFKGSWDRGTTSGI 225

Query: 204 VHSIDIHPSRKHTCLAGGSSGTVFTWDIRWPQQPVVLSGAGQDNAPARSLSASEVWEVQF 383
           +HSIDIHPSRKHTCLAGGSSGTVF WD+R  Q+P++LS  G  +   + LS SEVWEVQ+
Sbjct: 226 IHSIDIHPSRKHTCLAGGSSGTVFAWDLRRQQEPIILSSIGSSDTMTQPLSESEVWEVQY 285

Query: 384 DPFTNSSNHRVSSTRVLPVMICSEDGILAVAEQGEEPTELLLEPCAINSFDIDRQNPSDV 563
           D +T S N  +SS+R+LP MICSEDGILAV EQGEEPTELL EPCAINSFDIDRQNPSDV
Sbjct: 286 DYYTKSLNSNISSSRILPAMICSEDGILAVIEQGEEPTELLAEPCAINSFDIDRQNPSDV 345

Query: 564 ICSMEWESIAILSR 605
           ICS+EWESI ILSR
Sbjct: 346 ICSLEWESIVILSR 359


>ref|XP_003518229.1| PREDICTED: uncharacterized protein LOC100795073 [Glycine max]
          Length = 346

 Score =  311 bits (796), Expect = 2e-82
 Identities = 145/201 (72%), Positives = 166/201 (82%)
 Frame = +3

Query: 3   VGEGELSYKKVFDSNGLVSYTAAKWASPSEFATGGLGFSLQWWDQRKPGAAVSQFKCNWD 182
           +G+  L+Y+++FDS GLVSYTA +WASP EFATGG GF LQWWDQRKPG  VSQFK NWD
Sbjct: 148 IGDSNLNYRRLFDSAGLVSYTAVRWASPMEFATGGFGFGLQWWDQRKPGGPVSQFKGNWD 207

Query: 183 QGSSSGIVHSIDIHPSRKHTCLAGGSSGTVFTWDIRWPQQPVVLSGAGQDNAPARSLSAS 362
           +  +SGIVHSIDIHPSRKHTCLAGGS GTVF WD+RW QQP++LSGAG  N   +S+S S
Sbjct: 208 KKLTSGIVHSIDIHPSRKHTCLAGGSLGTVFAWDLRWQQQPIILSGAGAANTAVQSISES 267

Query: 363 EVWEVQFDPFTNSSNHRVSSTRVLPVMICSEDGILAVAEQGEEPTELLLEPCAINSFDID 542
           EVWEVQ+D    S+    SSTR+LP MICSEDGIL V EQGEEP ELL EPCAINSFDID
Sbjct: 268 EVWEVQYDRCIKSN---TSSTRILPSMICSEDGILGVIEQGEEPIELLAEPCAINSFDID 324

Query: 543 RQNPSDVICSMEWESIAILSR 605
           R NPSDVICS+EWE++AIL+R
Sbjct: 325 RHNPSDVICSLEWEAVAILTR 345


>ref|XP_002867327.1| WD-40 repeat protein family [Arabidopsis lyrata subsp. lyrata]
           gi|297313163|gb|EFH43586.1| WD-40 repeat protein family
           [Arabidopsis lyrata subsp. lyrata]
          Length = 362

 Score =  304 bits (778), Expect = 2e-80
 Identities = 146/200 (73%), Positives = 161/200 (80%)
 Frame = +3

Query: 6   GEGELSYKKVFDSNGLVSYTAAKWASPSEFATGGLGFSLQWWDQRKPGAAVSQFKCNWDQ 185
           GEG L Y+KVFD NGLV+Y A KWASP+EF TGG GF LQ WDQRK G A SQ K NW Q
Sbjct: 165 GEG-LRYRKVFDGNGLVAYRAVKWASPTEFVTGGYGFGLQLWDQRKSGEAASQLKGNWFQ 223

Query: 186 GSSSGIVHSIDIHPSRKHTCLAGGSSGTVFTWDIRWPQQPVVLSGAGQDNAPARSLSASE 365
           G +S IVHSIDIHPSRKHTC+AGGSSGTVF WD+RWPQQP+VLSG G        LS SE
Sbjct: 224 GKTSAIVHSIDIHPSRKHTCIAGGSSGTVFAWDLRWPQQPIVLSGVGASENINNPLSESE 283

Query: 366 VWEVQFDPFTNSSNHRVSSTRVLPVMICSEDGILAVAEQGEEPTELLLEPCAINSFDIDR 545
           VWEVQ+D +T S+N  +SS+R+LPVM CSEDGIL V EQGEEP ELL EPCAINSFDIDR
Sbjct: 284 VWEVQYDSYTKSNN--ISSSRILPVMTCSEDGILGVIEQGEEPIELLAEPCAINSFDIDR 341

Query: 546 QNPSDVICSMEWESIAILSR 605
           QNP DVICS+EWESIA+ SR
Sbjct: 342 QNPQDVICSLEWESIAVFSR 361


>ref|NP_567858.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
           gi|90093296|gb|ABD85161.1| At4g30840 [Arabidopsis
           thaliana] gi|332660417|gb|AEE85817.1| transducin/WD40
           domain-containing protein [Arabidopsis thaliana]
          Length = 361

 Score =  303 bits (775), Expect = 5e-80
 Identities = 146/200 (73%), Positives = 161/200 (80%)
 Frame = +3

Query: 6   GEGELSYKKVFDSNGLVSYTAAKWASPSEFATGGLGFSLQWWDQRKPGAAVSQFKCNWDQ 185
           GEG L Y+KVFD NGLV+Y A KWASP+EF TGG GF LQ WDQRK G AVSQ K NW Q
Sbjct: 165 GEG-LRYRKVFDGNGLVAYRAVKWASPTEFVTGGYGFGLQLWDQRKSGEAVSQLKGNWFQ 223

Query: 186 GSSSGIVHSIDIHPSRKHTCLAGGSSGTVFTWDIRWPQQPVVLSGAGQDNAPARSLSASE 365
           G +S IVHSIDIHPSRKHTC+AGGSSGTVF WD+RWPQQP+VLSG G        LS SE
Sbjct: 224 GKTSAIVHSIDIHPSRKHTCIAGGSSGTVFAWDLRWPQQPIVLSGVGASENINNPLSESE 283

Query: 366 VWEVQFDPFTNSSNHRVSSTRVLPVMICSEDGILAVAEQGEEPTELLLEPCAINSFDIDR 545
           VWEVQ+D +T S+   VSS+R+LPVM CSEDGIL + EQGEEP ELL EPCAINSFDIDR
Sbjct: 284 VWEVQYDSYTKSN---VSSSRILPVMTCSEDGILGIIEQGEEPIELLAEPCAINSFDIDR 340

Query: 546 QNPSDVICSMEWESIAILSR 605
           QNP DVICS+EWESIA+ SR
Sbjct: 341 QNPQDVICSLEWESIAVFSR 360


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