BLASTX nr result
ID: Bupleurum21_contig00016174
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00016174
(699 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003631193.1| PREDICTED: uncharacterized protein LOC100247... 168 1e-39
ref|XP_002329920.1| chromatin remodeling complex subunit [Populu... 155 1e-35
ref|XP_002523656.1| chromodomain helicase DNA binding protein, p... 151 1e-34
ref|XP_002303505.1| chromatin remodeling complex subunit [Populu... 147 3e-33
emb|CBI27197.3| unnamed protein product [Vitis vinifera] 144 2e-32
>ref|XP_003631193.1| PREDICTED: uncharacterized protein LOC100247555 [Vitis vinifera]
Length = 2355
Score = 168 bits (425), Expect = 1e-39
Identities = 96/193 (49%), Positives = 126/193 (65%), Gaps = 3/193 (1%)
Frame = +3
Query: 63 QQEDELRVRRGWKLPSFLDKSLNILRES-NDLGSGKSKIPSLSADPDKGQNSFRSELKDV 239
Q+EDEL + KLPS LD+SLN+LR+S N++G+G+S L DP+KG + S+ K+V
Sbjct: 2012 QKEDELGATKYGKLPSLLDRSLNLLRDSHNNMGAGESTSSGLMPDPNKGLSLSNSKGKEV 2071
Query: 240 AGSS-SKNELPHWLREAVGGPAKP-ESGLPPNISAIAQSVRILYGDDNPAIPPFLSPGLP 413
GSS SKN+LPHWLREAV P+KP + LPP +SAIAQSVR+LYG++ P IPPF++PG P
Sbjct: 2072 EGSSPSKNKLPHWLREAVSAPSKPPDPELPPTVSAIAQSVRLLYGEEKPTIPPFVAPGPP 2131
Query: 414 PAQPKDPXXXXXXXXXXXXAQPQTFNQHSLDIAGTSHGSRSSLHAEKIGSASPPLVKSSH 593
P+ PKDP + + S D+AGTS +SSLH E S+S PL
Sbjct: 2132 PSLPKDP----RLNLKKKKRRSHVLRRLSGDVAGTSWNFQSSLHGENFASSSVPLA-PPF 2186
Query: 594 PCVPQLSAATSGL 632
P +PQ +A SGL
Sbjct: 2187 PLLPQNTAGASGL 2199
>ref|XP_002329920.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222871157|gb|EEF08288.1| chromatin remodeling complex
subunit [Populus trichocarpa]
Length = 2332
Score = 155 bits (391), Expect = 1e-35
Identities = 92/197 (46%), Positives = 121/197 (61%), Gaps = 3/197 (1%)
Frame = +3
Query: 48 FDTQKQQEDELRVRRGWKLPSFLDKSLNILRES-NDLGSGKSKIPSLSADPDKGQNSFRS 224
FD Q+++E+ ++ G K PS LD+SL+IL +S N++GSG+ +L DP+K N F S
Sbjct: 1994 FDLQRREEEYNTMKYG-KSPSLLDRSLHILHDSHNNVGSGELSSSALFLDPNKVLNPFHS 2052
Query: 225 ELKDVAGSSSKNELPHWLREAVGGP-AKPE-SGLPPNISAIAQSVRILYGDDNPAIPPFL 398
+ K+V GSSS N+LPHWLREAV P KP LPP +SAIAQSVR+LYG++ P IPPF+
Sbjct: 2053 KGKEVVGSSSSNKLPHWLREAVSAPPVKPAIPDLPPTVSAIAQSVRVLYGENQPTIPPFI 2112
Query: 399 SPGLPPAQPKDPXXXXXXXXXXXXAQPQTFNQHSLDIAGTSHGSRSSLHAEKIGSASPPL 578
PG PP+QPKDP + F Q LDI G+S R+S+H + S
Sbjct: 2113 VPGPPPSQPKDP---RRILRKKKKRRSHMFRQFPLDIGGSSQDFRNSIHGSNVAS----- 2164
Query: 579 VKSSHPCVPQLSAATSG 629
+S P VP L TSG
Sbjct: 2165 --TSIPQVPPLVHETSG 2179
>ref|XP_002523656.1| chromodomain helicase DNA binding protein, putative [Ricinus
communis] gi|223537108|gb|EEF38742.1| chromodomain
helicase DNA binding protein, putative [Ricinus communis]
Length = 2257
Score = 151 bits (382), Expect = 1e-34
Identities = 92/197 (46%), Positives = 121/197 (61%), Gaps = 3/197 (1%)
Frame = +3
Query: 48 FDTQKQQEDELRVRRGWKLPSFLDKSLNILRES-NDLGSGKSKIPSLSADPDKGQNSFRS 224
FD+ +EDE + KLPS LD+SLN+ +S N++G+G+S +L +P+K N+ S
Sbjct: 1912 FDSH-HREDEHNATKYGKLPSLLDRSLNLACDSQNNVGNGESSGSALFPEPNKRLNNSHS 1970
Query: 225 ELKDVAGSSS-KNELPHWLREAVGGPAKP-ESGLPPNISAIAQSVRILYGDDNPAIPPFL 398
+ K+V GSSS KN+LPHWLREAV PAKP E LPP +SAIAQSVR+LYG++ P IPPF+
Sbjct: 1971 KGKEVVGSSSSKNKLPHWLREAVSSPAKPPEPDLPPTVSAIAQSVRVLYGENKPTIPPFV 2030
Query: 399 SPGLPPAQPKDPXXXXXXXXXXXXAQPQTFNQHSLDIAGTSHGSRSSLHAEKIGSASPPL 578
PG PP+QPKDP + F Q LD AG+ RSS+ I S+S P
Sbjct: 2031 IPGPPPSQPKDP---RRILRKKKKRRSHMFRQFPLDTAGSMQNFRSSILGSNIASSSIPP 2087
Query: 579 VKSSHPCVPQLSAATSG 629
+ P + L TSG
Sbjct: 2088 APTFQP-LQLLPPGTSG 2103
>ref|XP_002303505.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222840937|gb|EEE78484.1| chromatin remodeling complex
subunit [Populus trichocarpa]
Length = 2327
Score = 147 bits (370), Expect = 3e-33
Identities = 85/182 (46%), Positives = 111/182 (60%), Gaps = 4/182 (2%)
Frame = +3
Query: 48 FDTQKQQEDELRVRRGWKLPSFLDKSLNILRES-NDLGSGKSKIPSLSADPDKGQNSFRS 224
FD Q+++E+ ++ G KLPS LDKS++I R+S N++G G+ L P K N S
Sbjct: 1994 FDLQRREEEYETMKYG-KLPSLLDKSVHISRDSQNNVGIGELSNSGLFLHPSKFLNPINS 2052
Query: 225 ELKDVAGSSSKNELPHWLREAVGGPAKP-ESGLPPNISAIAQSVRILYGDDNPAIPPFLS 401
+ K+V GSSS N+LPHWLREAV P KP E LPP +SAIAQSVR+LYG++ P IPPF+
Sbjct: 2053 KGKEVVGSSSSNKLPHWLREAVTAPVKPPEPELPPTVSAIAQSVRVLYGENQPTIPPFVI 2112
Query: 402 PGLPPAQPKDPXXXXXXXXXXXXAQPQTFNQHSLDIAGTSHGSRSSLHAEKIGSAS--PP 575
PG PP+QPKDP + F Q LD G++ R +H + S S PP
Sbjct: 2113 PGPPPSQPKDP---RWILRKKKKRRSHMFRQFPLDTGGSTQDFRYGIHGCNVASTSIPPP 2169
Query: 576 LV 581
LV
Sbjct: 2170 LV 2171
>emb|CBI27197.3| unnamed protein product [Vitis vinifera]
Length = 1638
Score = 144 bits (363), Expect = 2e-32
Identities = 74/127 (58%), Positives = 97/127 (76%), Gaps = 3/127 (2%)
Frame = +3
Query: 63 QQEDELRVRRGWKLPSFLDKSLNILRES-NDLGSGKSKIPSLSADPDKGQNSFRSELKDV 239
Q+EDEL + KLPS LD+SLN+LR+S N++G+G+S L DP+KG + S+ K+V
Sbjct: 1399 QKEDELGATKYGKLPSLLDRSLNLLRDSHNNMGAGESTSSGLMPDPNKGLSLSNSKGKEV 1458
Query: 240 AGSS-SKNELPHWLREAVGGPAKP-ESGLPPNISAIAQSVRILYGDDNPAIPPFLSPGLP 413
GSS SKN+LPHWLREAV P+KP + LPP +SAIAQSVR+LYG++ P IPPF++PG P
Sbjct: 1459 EGSSPSKNKLPHWLREAVSAPSKPPDPELPPTVSAIAQSVRLLYGEEKPTIPPFVAPGPP 1518
Query: 414 PAQPKDP 434
P+ PKDP
Sbjct: 1519 PSLPKDP 1525