BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016169
         (853 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279095.1| PREDICTED: cleavage and polyadenylation spec...   258   1e-66
emb|CBI27869.3| unnamed protein product [Vitis vinifera]              258   1e-66
ref|XP_002514092.1| pre-mRNA cleavage factor im, 25kD subunit, p...   248   9e-64
ref|XP_004141062.1| PREDICTED: cleavage and polyadenylation spec...   246   4e-63
ref|XP_002867386.1| hypothetical protein ARALYDRAFT_491776 [Arab...   242   9e-62

>ref|XP_002279095.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5-like [Vitis vinifera]
          Length = 284

 Score =  258 bits (659), Expect = 1e-66
 Identities = 126/192 (65%), Positives = 145/192 (75%)
 Frame = +1

Query: 61  IKIYPLCNYYFASKAAPPLQHQTFDEIIYCLKSRYDVFGMRTCVEAVILIELSKQPHLLL 240
           + IYPL  YYF SK    L+ +T  + I  +KS Y  +G RTCV AVIL+EL K PHLLL
Sbjct: 91  LDIYPLSCYYFGSKDPLLLKEETLADRILRMKSNYSRYGSRTCVVAVILVELFKHPHLLL 150

Query: 241 LQVRNSIYKLPGGRLRPGESDIEGLKRKLTNKLSVECDGTGPDWEVGECLGRWWRVGFET 420
           LQV+NS +KLPGGRLRPGES+I GLKRKL+ KLSV  DG G DWEVGECLG WWR  FET
Sbjct: 151 LQVKNSFFKLPGGRLRPGESEINGLKRKLSRKLSVNEDGDGSDWEVGECLGMWWRPDFET 210

Query: 421 LLLPYLPYNVKSPKECRKLFFVKLPEKQKFTIPKTHKLLVVPLSQIHENQEIYGPIISGV 600
           LL PYLP NVK+PKEC KLF VKLP  +KF +PK  KLL +PL Q+HEN + YGPII+GV
Sbjct: 211 LLYPYLPPNVKNPKECTKLFLVKLPPSRKFIVPKNLKLLAIPLCQLHENDKTYGPIIAGV 270

Query: 601 PQLLSKFTIETI 636
           PQLLSKF+   I
Sbjct: 271 PQLLSKFSFNII 282


>emb|CBI27869.3| unnamed protein product [Vitis vinifera]
          Length = 291

 Score =  258 bits (659), Expect = 1e-66
 Identities = 126/192 (65%), Positives = 145/192 (75%)
 Frame = +1

Query: 61  IKIYPLCNYYFASKAAPPLQHQTFDEIIYCLKSRYDVFGMRTCVEAVILIELSKQPHLLL 240
           + IYPL  YYF SK    L+ +T  + I  +KS Y  +G RTCV AVIL+EL K PHLLL
Sbjct: 98  LDIYPLSCYYFGSKDPLLLKEETLADRILRMKSNYSRYGSRTCVVAVILVELFKHPHLLL 157

Query: 241 LQVRNSIYKLPGGRLRPGESDIEGLKRKLTNKLSVECDGTGPDWEVGECLGRWWRVGFET 420
           LQV+NS +KLPGGRLRPGES+I GLKRKL+ KLSV  DG G DWEVGECLG WWR  FET
Sbjct: 158 LQVKNSFFKLPGGRLRPGESEINGLKRKLSRKLSVNEDGDGSDWEVGECLGMWWRPDFET 217

Query: 421 LLLPYLPYNVKSPKECRKLFFVKLPEKQKFTIPKTHKLLVVPLSQIHENQEIYGPIISGV 600
           LL PYLP NVK+PKEC KLF VKLP  +KF +PK  KLL +PL Q+HEN + YGPII+GV
Sbjct: 218 LLYPYLPPNVKNPKECTKLFLVKLPPSRKFIVPKNLKLLAIPLCQLHENDKTYGPIIAGV 277

Query: 601 PQLLSKFTIETI 636
           PQLLSKF+   I
Sbjct: 278 PQLLSKFSFNII 289


>ref|XP_002514092.1| pre-mRNA cleavage factor im, 25kD subunit, putative [Ricinus
           communis] gi|223546548|gb|EEF48046.1| pre-mRNA cleavage
           factor im, 25kD subunit, putative [Ricinus communis]
          Length = 214

 Score =  248 bits (634), Expect = 9e-64
 Identities = 123/193 (63%), Positives = 145/193 (75%)
 Frame = +1

Query: 61  IKIYPLCNYYFASKAAPPLQHQTFDEIIYCLKSRYDVFGMRTCVEAVILIELSKQPHLLL 240
           + IYPL  YYF SK   P + +T  + +  +KS Y   G+RTCVEAVIL+EL K PHLLL
Sbjct: 23  LDIYPLSRYYFGSKDPLPFRDETLVDRVQRMKSNYLAHGLRTCVEAVILVELFKHPHLLL 82

Query: 241 LQVRNSIYKLPGGRLRPGESDIEGLKRKLTNKLSVECDGTGPDWEVGECLGRWWRVGFET 420
           LQ++NSI+KLPGGR+RPGESDI GLKRKL+ KLS   D T  DWEVGECLG WWR  FET
Sbjct: 83  LQIKNSIFKLPGGRIRPGESDIGGLKRKLSRKLSNNQDQT--DWEVGECLGMWWRPDFET 140

Query: 421 LLLPYLPYNVKSPKECRKLFFVKLPEKQKFTIPKTHKLLVVPLSQIHENQEIYGPIISGV 600
           LL PYLP N+K+PKEC KLF V+LP   KF +PK  KLL VPLSQIH+N + YG IISGV
Sbjct: 141 LLYPYLPPNLKTPKECTKLFLVRLPTSCKFIVPKNLKLLAVPLSQIHDNHKTYGGIISGV 200

Query: 601 PQLLSKFTIETIS 639
           PQLLSK++   I+
Sbjct: 201 PQLLSKYSFRIIN 213


>ref|XP_004141062.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5-like [Cucumis sativus]
           gi|449488056|ref|XP_004157928.1| PREDICTED: cleavage and
           polyadenylation specificity factor subunit 5-like
           [Cucumis sativus]
          Length = 217

 Score =  246 bits (629), Expect = 4e-63
 Identities = 119/196 (60%), Positives = 139/196 (70%)
 Frame = +1

Query: 49  EVEAIKIYPLCNYYFASKAAPPLQHQTFDEIIYCLKSRYDVFGMRTCVEAVILIELSKQP 228
           ++  I IYPL NYYF SK     + +T  + +  +KS Y   G+RTCVEAV+L+EL K P
Sbjct: 20  QLSYIDIYPLSNYYFGSKEPLLFKDETLSDRVLRMKSNYAAHGLRTCVEAVMLVELFKHP 79

Query: 229 HLLLLQVRNSIYKLPGGRLRPGESDIEGLKRKLTNKLSVECDGTGPDWEVGECLGRWWRV 408
           HLLL Q+RNSI+KLPGGR+RP ESDI+GL RKLT KLS         WEV ECLG WWR 
Sbjct: 80  HLLLFQIRNSIFKLPGGRIRPNESDIDGLTRKLTKKLSANGASDASHWEVSECLGMWWRP 139

Query: 409 GFETLLLPYLPYNVKSPKECRKLFFVKLPEKQKFTIPKTHKLLVVPLSQIHENQEIYGPI 588
            FETLL PYL  NVK  KEC KLF VKLPE +KF +PK  KL+ VPL QIHEN + YGPI
Sbjct: 140 DFETLLFPYLSTNVKGAKECTKLFLVKLPESRKFVVPKNLKLIAVPLCQIHENHKTYGPI 199

Query: 589 ISGVPQLLSKFTIETI 636
           ISG+PQLLSKF+   I
Sbjct: 200 ISGIPQLLSKFSFNII 215


>ref|XP_002867386.1| hypothetical protein ARALYDRAFT_491776 [Arabidopsis lyrata subsp.
           lyrata] gi|297313222|gb|EFH43645.1| hypothetical protein
           ARALYDRAFT_491776 [Arabidopsis lyrata subsp. lyrata]
          Length = 223

 Score =  242 bits (617), Expect = 9e-62
 Identities = 114/188 (60%), Positives = 145/188 (77%)
 Frame = +1

Query: 61  IKIYPLCNYYFASKAAPPLQHQTFDEIIYCLKSRYDVFGMRTCVEAVILIELSKQPHLLL 240
           +++YPL +YYF+S+ A  ++ +   + +  LKS Y   G+RTCVEAV+L+EL K PH+LL
Sbjct: 30  VELYPLSSYYFSSRDALRVKDEIISDRVIRLKSNYAAHGLRTCVEAVLLVELLKHPHVLL 89

Query: 241 LQVRNSIYKLPGGRLRPGESDIEGLKRKLTNKLSVECDGTGPDWEVGECLGRWWRVGFET 420
           LQ RNSI+KLPGGRLRPGESDIEG+KRKL +KLSV  +   P  EVGEC+G WWR  FET
Sbjct: 90  LQYRNSIFKLPGGRLRPGESDIEGVKRKLASKLSVNENVVVPGLEVGECIGMWWRPNFET 149

Query: 421 LLLPYLPYNVKSPKECRKLFFVKLPEKQKFTIPKTHKLLVVPLSQIHENQEIYGPIISGV 600
           L+ P+LP NVK PKEC KLF V+LP  Q+F +PK  KLL VPL Q+HEN++ YGPIIS +
Sbjct: 150 LMYPFLPPNVKHPKECTKLFLVRLPVNQQFVVPKNFKLLAVPLCQLHENEKTYGPIISQI 209

Query: 601 PQLLSKFT 624
           P+LLSKF+
Sbjct: 210 PKLLSKFS 217