BLASTX nr result

ID: Bupleurum21_contig00016168 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016168
         (621 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002336105.1| predicted protein [Populus trichocarpa] gi|2...   236   2e-60
ref|XP_002517275.1| DNA binding protein, putative [Ricinus commu...   235   4e-60
ref|XP_002308869.1| predicted protein [Populus trichocarpa] gi|2...   233   2e-59
ref|XP_002283226.1| PREDICTED: uncharacterized protein LOC100256...   226   3e-57
emb|CAN73573.1| hypothetical protein VITISV_007446 [Vitis vinifera]   226   3e-57

>ref|XP_002336105.1| predicted protein [Populus trichocarpa] gi|222872755|gb|EEF09886.1|
           predicted protein [Populus trichocarpa]
          Length = 323

 Score =  236 bits (602), Expect = 2e-60
 Identities = 130/199 (65%), Positives = 136/199 (68%), Gaps = 21/199 (10%)
 Frame = +2

Query: 86  SGGDF--DSSELGNGGGSGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQ 259
           + GDF  DS ELG+G G GDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQ
Sbjct: 86  NSGDFATDSGELGSGAG-GDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQ 144

Query: 260 LMSVDGLTRENVASHLQKYRLYLKRMQ-------------XXXXXXXXXXLDSATDHLFA 400
           LM+VDGLTRENVASHLQKYRLYLKRMQ                        D+ATDHLFA
Sbjct: 145 LMNVDGLTRENVASHLQKYRLYLKRMQGLSSGGGGPGNGAVGGGGGLTGGSDAATDHLFA 204

Query: 401 SSPVPAHFLHPVRPNSDQFLPFVPV------XXXXXXXXXXXXXXXXXXXXXXYRQMGHF 562
           SSPVPAHFLHP RPNSD FLPFVPV                            +R MGHF
Sbjct: 205 SSPVPAHFLHPGRPNSDHFLPFVPVAALQQHHHQQQMAAAAAAVGHPQLQGQYHRPMGHF 264

Query: 563 GSPPNGQFEHPYLARQAQQ 619
           GSP NGQFEHP+LARQ QQ
Sbjct: 265 GSPTNGQFEHPFLARQTQQ 283


>ref|XP_002517275.1| DNA binding protein, putative [Ricinus communis]
           gi|223543538|gb|EEF45068.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 315

 Score =  235 bits (600), Expect = 4e-60
 Identities = 126/192 (65%), Positives = 136/192 (70%), Gaps = 19/192 (9%)
 Frame = +2

Query: 101 DSSELGNGGGSGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGL 280
           DS++LG+ G +GDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGL
Sbjct: 85  DSADLGSAG-AGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGL 143

Query: 281 TRENVASHLQKYRLYLKRMQXXXXXXXXXX------------LDSATDHLFASSPVPAHF 424
           TRENVASHLQKYRLYLKRMQ                       D+AT+HLFASSPVPAHF
Sbjct: 144 TRENVASHLQKYRLYLKRMQGLSSGGAAGVNGSAGGGGGAAASDAATEHLFASSPVPAHF 203

Query: 425 LHPVRPNSDQFLPFVPVXXXXXXXXXXXXXXXXXXXXXX-------YRQMGHFGSPPNGQ 583
           LHP RPNSD FLPFVPV                             +RQMGHFGSPPNGQ
Sbjct: 204 LHPGRPNSDHFLPFVPVAALQHHHHQQQMAAAAAAAVAHPQLQSQYHRQMGHFGSPPNGQ 263

Query: 584 FEHPYLARQAQQ 619
           F+HP+LARQ+QQ
Sbjct: 264 FDHPFLARQSQQ 275


>ref|XP_002308869.1| predicted protein [Populus trichocarpa] gi|222854845|gb|EEE92392.1|
           predicted protein [Populus trichocarpa]
          Length = 318

 Score =  233 bits (594), Expect = 2e-59
 Identities = 129/192 (67%), Positives = 136/192 (70%), Gaps = 14/192 (7%)
 Frame = +2

Query: 86  SGGDF--DSSELGNGGGSGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQ 259
           + GDF  DSSELG+G  +GDEP RTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQ
Sbjct: 89  NSGDFAADSSELGSGA-AGDEP-RTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQ 146

Query: 260 LMSVDGLTRENVASHLQKYRLYLKRMQ----------XXXXXXXXXXLDSATDHLFASSP 409
           LM+VDGLTRENVASHLQKYRLYLKRMQ                     D+ATDHLFASSP
Sbjct: 147 LMNVDGLTRENVASHLQKYRLYLKRMQGLSSGGGGNGTGGGGGLTGGTDAATDHLFASSP 206

Query: 410 VPAHFLHPVRPNSDQFLPFVPV--XXXXXXXXXXXXXXXXXXXXXXYRQMGHFGSPPNGQ 583
           VPAHFLHP RPNSD FLPFVPV                        +RQMGHFGSP NGQ
Sbjct: 207 VPAHFLHPGRPNSDHFLPFVPVAALQNHHHQHQMAAMGHPQLPSQYHRQMGHFGSPTNGQ 266

Query: 584 FEHPYLARQAQQ 619
           FEHP+L RQ QQ
Sbjct: 267 FEHPFLPRQTQQ 278


>ref|XP_002283226.1| PREDICTED: uncharacterized protein LOC100256764 isoform 1 [Vitis
           vinifera] gi|359481436|ref|XP_003632618.1| PREDICTED:
           uncharacterized protein LOC100256764 isoform 2 [Vitis
           vinifera]
          Length = 306

 Score =  226 bits (576), Expect = 3e-57
 Identities = 123/201 (61%), Positives = 134/201 (66%), Gaps = 23/201 (11%)
 Frame = +2

Query: 83  DSGGDFDSSELGNGGGSGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQL 262
           +S  +FDS +LG+G  +GDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQL
Sbjct: 67  NSAPEFDSGDLGSGA-AGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQL 125

Query: 263 MSVDGLTRENVASHLQKYRLYLKRMQ-------------XXXXXXXXXXLDSATDHLFAS 403
           MSVDGLTRENVASHLQKYRLYLKRMQ                        D ATDHLFAS
Sbjct: 126 MSVDGLTRENVASHLQKYRLYLKRMQGLSAGGGGGGGGGGAGGGAGLAAADPATDHLFAS 185

Query: 404 SPVPAHFLHPVRPNSDQFLPFVPV----------XXXXXXXXXXXXXXXXXXXXXXYRQM 553
           SPVP HFLHP R +S+ FLPFVPV                                +RQ+
Sbjct: 186 SPVPPHFLHPGRASSEHFLPFVPVAALQQHHHHHQQMAVAAAAVAAHPQLQTQYHHHRQV 245

Query: 554 GHFGSPPNGQFEHPYLARQAQ 616
           GHFGSPPNGQFEHP+L RQ+Q
Sbjct: 246 GHFGSPPNGQFEHPFLPRQSQ 266


>emb|CAN73573.1| hypothetical protein VITISV_007446 [Vitis vinifera]
          Length = 306

 Score =  226 bits (576), Expect = 3e-57
 Identities = 123/201 (61%), Positives = 134/201 (66%), Gaps = 23/201 (11%)
 Frame = +2

Query: 83  DSGGDFDSSELGNGGGSGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQL 262
           +S  +FDS +LG+G  +GDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQL
Sbjct: 67  NSAPEFDSGDLGSGA-AGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQL 125

Query: 263 MSVDGLTRENVASHLQKYRLYLKRMQ-------------XXXXXXXXXXLDSATDHLFAS 403
           MSVDGLTRENVASHLQKYRLYLKRMQ                        D ATDHLFAS
Sbjct: 126 MSVDGLTRENVASHLQKYRLYLKRMQGLSAGGGGGGGGGGAGGGAGLAAADPATDHLFAS 185

Query: 404 SPVPAHFLHPVRPNSDQFLPFVPV----------XXXXXXXXXXXXXXXXXXXXXXYRQM 553
           SPVP HFLHP R +S+ FLPFVPV                                +RQ+
Sbjct: 186 SPVPPHFLHPGRASSEHFLPFVPVAALQQHHHHHQQMAVAAAAVAAHPQLQTQYHHHRQV 245

Query: 554 GHFGSPPNGQFEHPYLARQAQ 616
           GHFGSPPNGQFEHP+L RQ+Q
Sbjct: 246 GHFGSPPNGQFEHPFLPRQSQ 266


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