BLASTX nr result
ID: Bupleurum21_contig00016167
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00016167 (387 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002267846.2| PREDICTED: ycf20-like protein [Vitis vinifer... 127 1e-27 ref|XP_002312200.1| predicted protein [Populus trichocarpa] gi|2... 105 3e-21 ref|XP_002514798.1| conserved hypothetical protein [Ricinus comm... 101 5e-20 gb|AFK43635.1| unknown [Medicago truncatula] 84 2e-14 ref|XP_004139097.1| PREDICTED: ycf20-like protein-like [Cucumis ... 81 1e-13 >ref|XP_002267846.2| PREDICTED: ycf20-like protein [Vitis vinifera] gi|298205056|emb|CBI38352.3| unnamed protein product [Vitis vinifera] Length = 225 Score = 127 bits (318), Expect = 1e-27 Identities = 64/122 (52%), Positives = 84/122 (68%) Frame = +2 Query: 20 RI*SVMLHLSLSLKGNQISQASFHILQHCDTVLNWHTERTYRCKPTFKLGITPIPFPAKS 199 R+ +ML +LS+ ++ S S+ C T+ NW+ E ++ + + KLG+ PFP KS Sbjct: 20 RMGGIMLQSTLSVPESESSDCSYITFTTCCTIQNWNNEPSFSGQIS-KLGMKSAPFPRKS 78 Query: 200 SRARRLNWKIRLALNTGGVPSNGGQENTSGDGPGLGQTRLGRLVSAGGRQLLQKLNSTRK 379 + RR WK AL+TGG+P NGGQEN +G+GP LGQTRLGR+VSAGGRQLL KLNS RK Sbjct: 79 FQTRRHGWKTAFALDTGGIPDNGGQENLNGNGPDLGQTRLGRIVSAGGRQLLAKLNSARK 138 Query: 380 NF 385 NF Sbjct: 139 NF 140 >ref|XP_002312200.1| predicted protein [Populus trichocarpa] gi|222852020|gb|EEE89567.1| predicted protein [Populus trichocarpa] Length = 213 Score = 105 bits (263), Expect = 3e-21 Identities = 58/118 (49%), Positives = 80/118 (67%), Gaps = 1/118 (0%) Frame = +2 Query: 35 MLHLSLSLKGNQISQASFHILQHCDTVLNWHTERTYRCKPTFKLGITPIPFPAKSSRARR 214 ML LS+ N++S+ + + C + N ++E ++ + + K+GI +PF + RR Sbjct: 13 MLQSGLSVMVNEVSERTCITIATC-AMQNRNSEPSFSGQAS-KIGIKFVPFQKTRFQLRR 70 Query: 215 LNWKIRLALNTGGVPSNGGQENTSGDG-PGLGQTRLGRLVSAGGRQLLQKLNSTRKNF 385 W+I AL+TGG+P NGGQEN +GD PGLG TRLGR+VSAGGRQLL+KLNS RKNF Sbjct: 71 QGWRIAFALDTGGLPGNGGQENVNGDSPPGLGGTRLGRIVSAGGRQLLEKLNSARKNF 128 >ref|XP_002514798.1| conserved hypothetical protein [Ricinus communis] gi|223545849|gb|EEF47352.1| conserved hypothetical protein [Ricinus communis] Length = 201 Score = 101 bits (252), Expect = 5e-20 Identities = 55/118 (46%), Positives = 74/118 (62%) Frame = +2 Query: 32 VMLHLSLSLKGNQISQASFHILQHCDTVLNWHTERTYRCKPTFKLGITPIPFPAKSSRAR 211 ++L S+S+ ++S+ S L C + NW E T+ + K+G+ F K + Sbjct: 1 MVLQSSVSVMEGEVSERSCITLTIC-AMQNWSVEPTFS-RQIPKIGLKSASFLRKRFKLS 58 Query: 212 RLNWKIRLALNTGGVPSNGGQENTSGDGPGLGQTRLGRLVSAGGRQLLQKLNSTRKNF 385 +W+I AL+TGG+ NGG+EN GD GLG TRLGR+VSAGGRQLLQKLNS RKNF Sbjct: 59 GQDWRIPFALDTGGISGNGGEENLDGDSSGLGSTRLGRIVSAGGRQLLQKLNSARKNF 116 >gb|AFK43635.1| unknown [Medicago truncatula] Length = 201 Score = 83.6 bits (205), Expect = 2e-14 Identities = 42/85 (49%), Positives = 53/85 (62%), Gaps = 5/85 (5%) Frame = +2 Query: 146 CKPTFK-----LGITPIPFPAKSSRARRLNWKIRLALNTGGVPSNGGQENTSGDGPGLGQ 310 C+P F +G+ P+PF RR W + ALNT G+ NG Q++ + G LG Sbjct: 32 CQPRFSALTPNVGMKPLPFLQSRFLRRRPGWTVAFALNTDGLSGNGEQQSLNDSGSSLGG 91 Query: 311 TRLGRLVSAGGRQLLQKLNSTRKNF 385 TRLGR++SAGGRQLL KLNS RKNF Sbjct: 92 TRLGRILSAGGRQLLDKLNSARKNF 116 >ref|XP_004139097.1| PREDICTED: ycf20-like protein-like [Cucumis sativus] Length = 212 Score = 80.9 bits (198), Expect = 1e-13 Identities = 53/120 (44%), Positives = 68/120 (56%), Gaps = 1/120 (0%) Frame = +2 Query: 29 SVMLHLSLSLKGNQISQASFHILQHCDTVLNWHTERTYRCKPTFKLGITPIPFPAKSSRA 208 +V+LH L N Q S C + W E + + + L + PFP KS + Sbjct: 10 AVILHSRLLTTANYSPQVSCLTNMPC-LIHYWGYEAIFNGRSSSFL-LKSAPFPRKSLQT 67 Query: 209 RRLNWKIRLALNTGGVPSNGGQENTS-GDGPGLGQTRLGRLVSAGGRQLLQKLNSTRKNF 385 R K+ AL+TGGV S+GG +N GD LG+TRLGRLVS+G RQLL+KLNS RKNF Sbjct: 68 SRHVNKLAFALDTGGVSSSGGGDNIDDGDESNLGRTRLGRLVSSGARQLLEKLNSARKNF 127